BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0028.0315.p
         (174 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300311056|ref|YP_003775148.1| carbonic anhydrase/acetyltransf...   344   2e-96
gi|300313410|ref|YP_003777502.1| carbonic anhydrase/acetyltransf...   103   7e-24
gi|300312547|ref|YP_003776639.1| isoleucine patch superfamily ca...    78   4e-16

>gi|300311056|ref|YP_003775148.1| carbonic
           anhydrase/acetyltransferase [Herbaspirillum seropedicae
           SmR1]
          Length = 174

 Score =  344 bits (882), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 167/174 (95%), Positives = 171/174 (98%)

Query: 1   MAIYQLAQDIPEIHETAFVAESSTVVGKVRMEAHSSVWFNVAIRGDNELITIGENSNVQE 60
           MAIYQL QDIPEIH+TAFVAESSTVVGKV+MEAHSSVWFNVAIRGDNELITIGENSNVQE
Sbjct: 1   MAIYQLEQDIPEIHDTAFVAESSTVVGKVKMEAHSSVWFNVAIRGDNELITIGENSNVQE 60

Query: 61  GAVLHTDHGYPMVIGKNVTVGHQAMLHGCTIGEGALIGIQAVVLNGARIGKNCLVGAGAL 120
           GAVLHTD GYPMVIGKNVTVGHQAMLHGCTIGEGALIGIQAVVLNGA+IGKNCLVGAGAL
Sbjct: 61  GAVLHTDVGYPMVIGKNVTVGHQAMLHGCTIGEGALIGIQAVVLNGAKIGKNCLVGAGAL 120

Query: 121 VTEGKEFPDNSLIIGAPAKAVRQLSEEDIARMRAGTDSYVQRAQQFKTQLKRIA 174
           VTEGKEFPDNSLIIGAPAKAVRQLSEEDIARMRAGTDSYVQRAQQFK +LKRIA
Sbjct: 121 VTEGKEFPDNSLIIGAPAKAVRQLSEEDIARMRAGTDSYVQRAQQFKAKLKRIA 174


>gi|300313410|ref|YP_003777502.1| carbonic
           anhydrase/acetyltransferase [Herbaspirillum seropedicae
           SmR1]
          Length = 200

 Score =  103 bits (258), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 56/174 (32%), Positives = 96/174 (55%)

Query: 1   MAIYQLAQDIPEIHETAFVAESSTVVGKVRMEAHSSVWFNVAIRGDNELITIGENSNVQE 60
           M  Y +   IP +  +A+V  ++ ++G V +     V     +RGD   I +   +NVQ+
Sbjct: 1   MPCYSIEGVIPVVDPSAYVHPTAVLIGDVIVGPDCYVGPTACLRGDFGRIVLQRGANVQD 60

Query: 61  GAVLHTDHGYPMVIGKNVTVGHQAMLHGCTIGEGALIGIQAVVLNGARIGKNCLVGAGAL 120
             V+H   G+  V+ +N  +GH A+LH CT+   AL+G+ AVV++ A +G+  +V A A 
Sbjct: 61  TCVIHGFPGHDTVVEENGHIGHGAVLHSCTVRRDALVGMNAVVMDEAVVGEQAIVAACAF 120

Query: 121 VTEGKEFPDNSLIIGAPAKAVRQLSEEDIARMRAGTDSYVQRAQQFKTQLKRIA 174
           V  G + P  +L  G PAK VR+L+ +++A  +AGT +Y     +    L+ ++
Sbjct: 121 VRAGMQIPPRTLAAGLPAKVVRELTADEMAWKQAGTRTYQDLTVRCLASLREVS 174


>gi|300312547|ref|YP_003776639.1| isoleucine patch superfamily
           carbonic anhydrase/acetyltransferase [Herbaspirillum
           seropedicae SmR1]
          Length = 186

 Score = 77.8 bits (190), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 44/126 (34%), Positives = 74/126 (58%), Gaps = 10/126 (7%)

Query: 11  PEIHETAFVAESSTVVGKVRMEAHSSVWFNVAIRGDN-------ELITIGENSNVQEGAV 63
           P++HE+A+V  ++ + GKV +  +  +     IR D        E I IG +SN+Q+G V
Sbjct: 11  PQVHESAYVDHTAILCGKVIVHENVFIGPYAVIRADEVDEHGEMEPIIIGAHSNIQDGVV 70

Query: 64  LHTDHGYPMVIGKNVTVGHQAMLHG-CTIGEGALIGIQAVVLNGARIGKNCLVGAGALVT 122
           +H+  G  + IG+  ++ H+A++HG CT+G+ A IG  +V+ N   IG  C+V   A+V 
Sbjct: 71  IHSKSGAAVTIGERTSIAHRAIVHGPCTVGDDAFIGFNSVLFN-CSIGAGCVVRHNAVV- 128

Query: 123 EGKEFP 128
           +G + P
Sbjct: 129 DGCDLP 134


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.318    0.133    0.379 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 536,128
Number of extensions: 22596
Number of successful extensions: 115
Number of sequences better than 1.0e-08: 3
Number of HSP's gapped: 109
Number of HSP's successfully gapped: 3
Length of query: 174
Length of database: 1,619,870
Length adjustment: 79
Effective length of query: 95
Effective length of database: 1,245,805
Effective search space: 118351475
Effective search space used: 118351475
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 127 (53.5 bits)