BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0028.0177.p (617 letters) Database: BlastDatabases/689/689 4735 sequences; 1,619,870 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|300311168|ref|YP_003775260.1| ABC transporter ATPase [Herbasp... 1200 0.0 gi|300312716|ref|YP_003776808.1| ABC transporter duplicated ATPa... 410 e-115 gi|300310466|ref|YP_003774558.1| dipeptide/oligopeptide/nickel A... 305 7e-84 gi|300312478|ref|YP_003776570.1| dipeptide/oligopeptide/nickel A... 255 8e-69 gi|300310896|ref|YP_003774988.1| oligopeptide ABC transporter AT... 248 8e-67 >gi|300311168|ref|YP_003775260.1| ABC transporter ATPase [Herbaspirillum seropedicae SmR1] Length = 617 Score = 1200 bits (3105), Expect = 0.0, Method: Compositional matrix adjust. Identities = 595/617 (96%), Positives = 605/617 (98%) Query: 1 MQQSQRVLDVRQLNVRFATSERTVDAVRDLSFHVNQGETLAIVGESGSGKSVSSLAIMRL 60 MQQ QRVLDV L+VRF+TSERTVDAVRDLSFHV+QGETLAIVGESGSGKSVSSLAIMRL Sbjct: 1 MQQPQRVLDVNHLSVRFSTSERTVDAVRDLSFHVDQGETLAIVGESGSGKSVSSLAIMRL 60 Query: 61 IEHGGGKIASGSMQFLRRSGQSLDLAQADNATMRSIRGAEIAMIFQEPMTSLNPVFTVGE 120 IEHGGGKIASGSMQFLRRSGQ LDLAQADNATMRSIRGAEIAMIFQEPMTSLNPVFTVGE Sbjct: 61 IEHGGGKIASGSMQFLRRSGQRLDLAQADNATMRSIRGAEIAMIFQEPMTSLNPVFTVGE 120 Query: 121 QIAESIRLHQGMSRAAAQAEALRMLEMVRIPEAKRVLGRHPHQLSGGMRQRVMIAMALSC 180 QIAESIRLHQG+ RAAAQAEALRMLEMVRIPEAKRVLGRHPHQLSGGMRQRVMIAMALSC Sbjct: 121 QIAESIRLHQGLGRAAAQAEALRMLEMVRIPEAKRVLGRHPHQLSGGMRQRVMIAMALSC 180 Query: 181 KPSLLIADEPTTALDVTIQAQILQLIRSLQQEMQMGVIFITHDMGVVAEVADRVVVMCRG 240 KPSLLIADEPTTALDVTIQAQILQLIRSLQQEMQMGVIFITHDMGVVAEVADRVVVMCRG Sbjct: 181 KPSLLIADEPTTALDVTIQAQILQLIRSLQQEMQMGVIFITHDMGVVAEVADRVVVMCRG 240 Query: 241 EKVEENEVKTLFAAPVHPYTQSLLAAVPRLGSMRGTDKPLRFGIAPQAEVRPDLIASELQ 300 EKVEEN V LFAAP HPYTQSLLAAVPRLGSMRGTDKPLRFGIAPQAE RPDLIASELQ Sbjct: 241 EKVEENAVNPLFAAPAHPYTQSLLAAVPRLGSMRGTDKPLRFGIAPQAEARPDLIASELQ 300 Query: 301 AQAEIAAQRQPILKVRDLTTRFDVKSGIFGRVKQRVHAVEKVSFDLYSGETLAIVGESGC 360 AQAEIAAQRQPILKVRDLTTRFDVKSGIFGRV+QRVHAVEKVSFDLY+GETLAIVGESGC Sbjct: 301 AQAEIAAQRQPILKVRDLTTRFDVKSGIFGRVRQRVHAVEKVSFDLYAGETLAIVGESGC 360 Query: 361 GKSTTGRSLLRLVDIAGGKVEFGGRDLAQLPRSELRELRRDIQFIFQDPFASLDPRMTVG 420 GKSTTGRSLLRLVDIAGGKVEFGGRDLAQLPRSELR+LRRDIQFIFQDPFASLDPRMTVG Sbjct: 361 GKSTTGRSLLRLVDIAGGKVEFGGRDLAQLPRSELRQLRRDIQFIFQDPFASLDPRMTVG 420 Query: 421 YSIMEPMLVHGLKEGAQERVDALLTRVGLTPEHGQRYPHEFSGGQRQRICIARALALNPK 480 YSIMEPMLVHG+KEGAQERVDALLTRVGLTPEHGQRYPHEFSGGQRQRICIARALALNPK Sbjct: 421 YSIMEPMLVHGMKEGAQERVDALLTRVGLTPEHGQRYPHEFSGGQRQRICIARALALNPK 480 Query: 481 IVIADESVSALDVSIQAQIVNLMLDLQAELGISFIFISHDMAVVERISHRVAVMYLGQIV 540 IVIADESVSALDVSIQAQIVNLMLDLQAELGISFIFISHDMAVVERISHRVAVMYLGQIV Sbjct: 481 IVIADESVSALDVSIQAQIVNLMLDLQAELGISFIFISHDMAVVERISHRVAVMYLGQIV 540 Query: 541 EIGPRRAIFENPQHPYTRKLMAAVPVADPTLRQPGKKLMTDEIPSPIRLVGDEPKVEPLR 600 EIGPRRAIFENPQHPYTRKLMAAVPVADPTLRQPGKKL+TDEIPSPIR VGDEPKVEPL+ Sbjct: 541 EIGPRRAIFENPQHPYTRKLMAAVPVADPTLRQPGKKLLTDEIPSPIRRVGDEPKVEPLQ 600 Query: 601 EVAPGHFVAQHRIAGTF 617 EVAPGHFVAQHRIAG F Sbjct: 601 EVAPGHFVAQHRIAGAF 617 >gi|300312716|ref|YP_003776808.1| ABC transporter duplicated ATPase [Herbaspirillum seropedicae SmR1] Length = 529 Score = 410 bits (1053), Expect = e-115, Method: Compositional matrix adjust. Identities = 252/562 (44%), Positives = 340/562 (60%), Gaps = 48/562 (8%) Query: 4 SQRVLDVRQLNVRFATSERTVDAVRDLSFHVNQGETLAIVGESGSGKSVSSLAIMRLIEH 63 S +L+V L VRF + VD V SF + GE A+VGESGSGK+VSSLA+M+L + Sbjct: 2 SAALLEVNNLTVRFGDTV-VVDRV---SFAIAPGEKFALVGESGSGKTVSSLAVMQLNQD 57 Query: 64 GGGKIASGSMQFLRRSGQSLDLAQADNATMRSIRGAEIAMIFQEPMTSLNPVFTVGEQIA 123 + GS+ GQ D+ M+ +RG ++AMIFQEPMT+LNP+FT+G QIA Sbjct: 58 ARYE---GSILL---DGQ--DVLAKSERQMQQVRGNDVAMIFQEPMTALNPLFTIGNQIA 109 Query: 124 ESIRLHQGMSRAAAQAEALRMLEMVRIPEAKRVLGRHPHQLSGGMRQRVMIAMALSCKPS 183 E + H+G++ A A+ +LE IPE R +PH+LSGG RQR MIAMAL+CKP Sbjct: 110 EVLMHHEGLNARDAARRAVALLEKTGIPEPARRALSYPHELSGGQRQRAMIAMALACKPK 169 Query: 184 LLIADEPTTALDVTIQAQILQLIRSLQQEMQMGVIFITHDMGVVAEVADRVVVMCRGEKV 243 LLIADEPTTALDVTIQ QIL L+ LQ+E M V+ I+HD+ +V ADRV VM +G+ V Sbjct: 170 LLIADEPTTALDVTIQVQILALLNQLQREENMAVLIISHDLNLVRHFADRVGVMEKGKLV 229 Query: 244 EENEVKTLFAAPVHPYTQSLLAAVPRLGSMRGTDKPLRFGIAPQAEVRPDLIASELQAQA 303 E V LFA P PYT+ LL + PQ + + QA Sbjct: 230 ESASVAELFANPQQPYTRKLLQS------------------RPQRNAADVAADAPVVLQA 271 Query: 304 EIAAQRQPILKVRDLTTRFDVKSGIFGRVKQRVHAVEKVSFDLYSGETLAIVGESGCGKS 363 E L + +K G F K+ HAV+ V L GETL IVGESG GKS Sbjct: 272 E------------RLRCTYHIKQGWFA--KRAFHAVDGVDLQLRRGETLGIVGESGSGKS 317 Query: 364 TTGRSLLRLVDIA-GGKVEFGGRDLAQLPRSELRELRRDIQFIFQDPFASLDPRMTVGYS 422 T G +LLRL + G + F G +++ P+ ELR LR +Q +FQDPFASL PR TV Sbjct: 318 TLGMALLRLSAASVAGSIRFDGVPISERPQRELRPLRSRMQVVFQDPFASLSPRRTVEQI 377 Query: 423 IMEPMLVHGLKEGAQERVDAL---LTRVGLTPEHGQRYPHEFSGGQRQRICIARALALNP 479 + E + +H A+++ A+ L VGL+ +RYPHEFSGGQRQRI IARAL L P Sbjct: 378 VGEGLELHHPDRSAEQQRQAIVAALEEVGLSAAVLERYPHEFSGGQRQRIAIARALVLQP 437 Query: 480 KIVIADESVSALDVSIQAQIVNLMLDLQAELGISFIFISHDMAVVERISHRVAVMYLGQI 539 ++++ DE SALDV++Q Q++ L+ +LQ G++++FI+HD+AVV+ ++H+V VM G++ Sbjct: 438 ELLLLDEPTSALDVTVQQQVLQLLAELQRRHGLAYLFITHDLAVVQAMAHQVIVMKDGKV 497 Query: 540 VEIGPRRAIFENPQHPYTRKLM 561 VE G + + PQ YTR+L+ Sbjct: 498 VESGATAQVLQQPQQEYTRRLV 519 >gi|300310466|ref|YP_003774558.1| dipeptide/oligopeptide/nickel ABC transporter ATPase [Herbaspirillum seropedicae SmR1] Length = 645 Score = 305 bits (781), Expect = 7e-84, Method: Compositional matrix adjust. Identities = 188/548 (34%), Positives = 305/548 (55%), Gaps = 39/548 (7%) Query: 24 VDAVRDLSFHVNQGETLAIVGESGSGKSVSSLAIMRLIEHGGGKIASGSMQFLRRSGQSL 83 V+ V++++F V +GE LA++GESGSGK+ +L+++ G IA G ++ R Sbjct: 46 VEIVKNVNFTVARGEVLALIGESGSGKTTIALSLLGY-ARAGCHIAGGQVRIGERQ---- 100 Query: 84 DLAQADNATMRSIRGAEIAMIFQEPMTSLNPVFTVGEQIAESIRLHQGMSRAAAQAEALR 143 + Q D + ++RG +A I Q + NP T+ +Q+ ES H M +A+A +A+ Sbjct: 101 -IDQMDEKALLAMRGHHVAYIAQSAAAAFNPARTLMDQVIESALQHGVMDKASAMRKAVE 159 Query: 144 MLEMVRIPEAKRVLGRHPHQLSGGMRQRVMIAMALSCKPSLLIADEPTTALDVTIQAQIL 203 + + +P ++ R+PHQ+SGG QRVM AMAL P L+I DEPTTALDVT Q ++L Sbjct: 160 LFRALALPNPDKIGERYPHQVSGGQLQRVMAAMALVTGPELVILDEPTTALDVTTQIEVL 219 Query: 204 QLIRSLQQEMQMGVIFITHDMGVVAEVADRVVVMCRGEKVEENEVKTLFAAPVHPYTQSL 263 + +++ +E+ ++++HD+ VVA++ADR++V+ G E + AP YTQ L Sbjct: 220 RAFKNVVKELGTTAVYVSHDLAVVAQMADRIIVLRDGAVRETGSTSQVLHAPADSYTQCL 279 Query: 264 LAAVPRLGSMRGTDKPLRFGIAPQAEVRP--DLIASELQAQAEIAAQRQPILKVRDLTTR 321 LAA +P A V +++ + L A+A R P+L++ L Sbjct: 280 LAAA-----------------SPAARVVQLREILPATLPAEA-----RAPLLRISGLVAG 317 Query: 322 FDV--KSGIFGRVKQRVHAVEKVSFDLYSGETLAIVGESGCGKSTTGRSLLRLVDIAGGK 379 + + G+ G V ++ ++ + G T+ I+GESG GK+T R++ ++ A G Sbjct: 318 YGAPDRLGLPG-----VRILDDINLTIQRGSTVGIIGESGSGKTTLARAVAGMIAPARGS 372 Query: 380 VEFGGRDLAQLPRSELRELRRDIQFIFQDPFASLDPRMTVGYSIMEPM-LVHGLK-EGAQ 437 ++ G L+ RE R +Q +FQ+ +L+P ++G + P+ HGLK E + Sbjct: 373 IQLDGETLSPTLEGRTREQFRRVQIVFQNADTALNPSHSIGRILNRPLSFYHGLKGEAMR 432 Query: 438 ERVDALLTRVGLTPEHGQRYPHEFSGGQRQRICIARALALNPKIVIADESVSALDVSIQA 497 R LL V L R P E SGGQ+QR+ +ARALA P +++ DE SALD + A Sbjct: 433 RRTAELLDLVQLPATVIDRLPAELSGGQKQRVNLARALAAKPDLILCDEVTSALDTVVAA 492 Query: 498 QIVNLMLDLQAELGISFIFISHDMAVVERISHRVAVMYLGQIVEIGPRRAIFENPQHPYT 557 I+ L+ +L+ EL +S++FISHD++ V I + V+Y G++V PR A+ P HPY+ Sbjct: 493 AILELLAELRRELQVSYMFISHDISTVRAICDDIVVLYAGRMVANRPREAMMAPPYHPYS 552 Query: 558 RKLMAAVP 565 L+++VP Sbjct: 553 HLLLSSVP 560 Score = 133 bits (334), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 89/247 (36%), Positives = 137/247 (55%), Gaps = 12/247 (4%) Query: 335 RVHAVEKVSFDLYSGETLAIVGESGCGKSTTGRSLLRL----VDIAGGKVEFGGRDLAQL 390 +V V+ V+F + GE LA++GESG GK+T SLL IAGG+V G R + Q+ Sbjct: 45 QVEIVKNVNFTVARGEVLALIGESGSGKTTIALSLLGYARAGCHIAGGQVRIGERQIDQM 104 Query: 391 PRSELRELR-RDIQFIFQDPFASLDPRMTVGYSIMEPMLVHGL--KEGAQERVDALLTRV 447 L +R + +I Q A+ +P T+ ++E L HG+ K A + L + Sbjct: 105 DEKALLAMRGHHVAYIAQSAAAAFNPARTLMDQVIESALQHGVMDKASAMRKAVELFRAL 164 Query: 448 GL-TPEH-GQRYPHEFSGGQRQRICIARALALNPKIVIADESVSALDVSIQAQIVNLMLD 505 L P+ G+RYPH+ SGGQ QR+ A AL P++VI DE +ALDV+ Q +++ + Sbjct: 165 ALPNPDKIGERYPHQVSGGQLQRVMAAMALVTGPELVILDEPTTALDVTTQIEVLRAFKN 224 Query: 506 LQAELGISFIFISHDMAVVERISHRVAVMYLGQIVEIGPRRAIFENPQHPYTRKLMAAVP 565 + ELG + +++SHD+AVV +++ R+ V+ G + E G + P YT+ L+AA Sbjct: 225 VVKELGTTAVYVSHDLAVVAQMADRIIVLRDGAVRETGSTSQVLHAPADSYTQCLLAA-- 282 Query: 566 VADPTLR 572 A P R Sbjct: 283 -ASPAAR 288 >gi|300312478|ref|YP_003776570.1| dipeptide/oligopeptide/nickel ABC transporter ATPase [Herbaspirillum seropedicae SmR1] Length = 334 Score = 255 bits (651), Expect = 8e-69, Method: Compositional matrix adjust. Identities = 140/273 (51%), Positives = 180/273 (65%), Gaps = 10/273 (3%) Query: 7 VLDVRQLNVRFATSERTVDAVRDLSFHVNQGETLAIVGESGSGKSVSSLAIMRLIEHGGG 66 +LDV+ L V T + AVR + F V +GE L +VGESG GKS++SLA+M L+ Sbjct: 4 LLDVKNLKVDLPTENGMLHAVRGIDFQVRRGEMLCLVGESGCGKSMTSLALMGLLP---- 59 Query: 67 KIASGSMQFLRRSGQSLDLAQADNATMRSIRGAEIAMIFQEPMTSLNPVFTVGEQIAESI 126 + A S + G +DL + + +RG +AMIFQEPMTSLNP +T+G Q+ E++ Sbjct: 60 RKAQCSADHILFDG--VDLHGMPDKQLMQLRGKRMAMIFQEPMTSLNPSYTLGNQLCEAM 117 Query: 127 RLHQGMSRAAAQAEALRMLEMVRIPEAKRVLGRHPHQLSGGMRQRVMIAMALSCKPSLLI 186 G+SRA A+ AL +L I A+ L ++PHQLSGG+RQRVMIAM+L C P L+I Sbjct: 118 LQQPGVSRAEARERALYLLHRTGISNAEDRLRQYPHQLSGGLRQRVMIAMSLMCNPDLII 177 Query: 187 ADEPTTALDVTIQAQILQLIRSLQQEMQMGVIFITHDMGVVAEVADRVVVMCRGEKVEEN 246 ADEPTTALDVTIQAQIL++IR LQQE VIFITHD+GVV+ +ADRV VM G+ VE Sbjct: 178 ADEPTTALDVTIQAQILRMIRELQQEFGAAVIFITHDLGVVSRIADRVAVMYAGQVVETT 237 Query: 247 EVKTLFAAPVHPYTQSLLAAVPRLGSMRGTDKP 279 +V LFA P HPYTQ LL +P +RG P Sbjct: 238 DVAQLFAQPRHPYTQGLLNCIP----VRGKTLP 266 Score = 201 bits (512), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 115/276 (41%), Positives = 165/276 (59%), Gaps = 18/276 (6%) Query: 312 ILKVRDLTTRFDVKSGIFGRVKQRVHAVEKVSFDLYSGETLAIVGESGCGKSTTGRSLLR 371 +L V++L ++G+ HAV + F + GE L +VGESGCGKS T +L+ Sbjct: 4 LLDVKNLKVDLPTENGML-------HAVRGIDFQVRRGEMLCLVGESGCGKSMTSLALMG 56 Query: 372 LV----DIAGGKVEFGGRDLAQLPRSELRELR-RDIQFIFQDPFASLDPRMTVGYSIMEP 426 L+ + + F G DL +P +L +LR + + IFQ+P SL+P T+G + E Sbjct: 57 LLPRKAQCSADHILFDGVDLHGMPDKQLMQLRGKRMAMIFQEPMTSLNPSYTLGNQLCEA 116 Query: 427 MLVH-GLKEG-AQERVDALLTRVGLTPEHGQ--RYPHEFSGGQRQRICIARALALNPKIV 482 ML G+ A+ER LL R G++ + +YPH+ SGG RQR+ IA +L NP ++ Sbjct: 117 MLQQPGVSRAEARERALYLLHRTGISNAEDRLRQYPHQLSGGLRQRVMIAMSLMCNPDLI 176 Query: 483 IADESVSALDVSIQAQIVNLMLDLQAELGISFIFISHDMAVVERISHRVAVMYLGQIVEI 542 IADE +ALDV+IQAQI+ ++ +LQ E G + IFI+HD+ VV RI+ RVAVMY GQ+VE Sbjct: 177 IADEPTTALDVTIQAQILRMIRELQQEFGAAVIFITHDLGVVSRIADRVAVMYAGQVVET 236 Query: 543 GPRRAIFENPQHPYTRKLMAAVPVADPTLRQPGKKL 578 +F P+HPYT+ L+ +PV TL PG L Sbjct: 237 TDVAQLFAQPRHPYTQGLLNCIPVRGKTL--PGSHL 270 >gi|300310896|ref|YP_003774988.1| oligopeptide ABC transporter ATPase [Herbaspirillum seropedicae SmR1] Length = 335 Score = 248 bits (634), Expect = 8e-67, Method: Compositional matrix adjust. Identities = 144/329 (43%), Positives = 197/329 (59%), Gaps = 33/329 (10%) Query: 311 PILKVRDLTTRF-DVKSGIFGRVKQR---------VHAVEKVSFDLYSGETLAIVGESGC 360 P+++ R ++ RF + + G R Q HA++KV + GE + +VGESGC Sbjct: 7 PLIETRAVSRRFGERRQGWLQRQLQARGWSRPPAITHALDKVDLKVLPGEVVGLVGESGC 66 Query: 361 GKSTTGRSLLRLVDIAGGKVEFGGRDLAQLPRSELRELRRDIQFIFQDPFASLDPRMTVG 420 GKST GR L+D + G+V GRD A L E E R +Q IFQ+P+ASL+PR+ + Sbjct: 67 GKSTLGRVACGLLDPSDGQVLVNGRDRASLSSREEAEARLQVQMIFQNPYASLNPRLRID 126 Query: 421 YSIMEPMLVHGLKEGA-QERVDALLTRVGLTPEHGQRYPHEFSGGQRQRICIARALALNP 479 + E V+G EG + V L R GL P RYPH+FSGGQRQRI IARALA+ P Sbjct: 127 QIVGEAAQVNGKVEGDLDDYVCQQLLRAGLDPALRDRYPHQFSGGQRQRIGIARALAVQP 186 Query: 480 KIVIADESVSALDVSIQAQIVNLMLDLQAELGISFIFISHDMAVVERISHRVAVMYLGQI 539 ++++ DE+V+ALDVSIQAQI+NL +DL+AELG++++FISHD+ VVE +S RV +MYLG++ Sbjct: 187 QMLVCDEAVAALDVSIQAQILNLFMDLRAELGLTYLFISHDLGVVEHVSDRVVIMYLGRV 246 Query: 540 VEIGPRRAIFENPQHPYTRKLMAAVPVADPTLRQPGKKLMTDEIPSPI------------ 587 VE P +F P HPYT+ L+A VP R+ + EIPSP+ Sbjct: 247 VESAPVAELFGQPNHPYTQALLAEVPRM--GARKKEFTAIKGEIPSPLNPPTGCHFNPRC 304 Query: 588 -----RLVGDEPKVEPLREVAPGHFVAQH 611 R ++P LRE+APGH A H Sbjct: 305 PHATQRCREEQPL---LREIAPGHMSACH 330 Score = 159 bits (402), Expect = 6e-40, Method: Compositional matrix adjust. Identities = 100/269 (37%), Positives = 145/269 (53%), Gaps = 23/269 (8%) Query: 11 RQLNVR-FATSERTVDAVRDLSFHVNQGETLAIVGESGSGKSVSSLAIMRLIEHGGGKIA 69 RQL R ++ A+ + V GE + +VGESG GKS G++A Sbjct: 28 RQLQARGWSRPPAITHALDKVDLKVLPGEVVGLVGESGCGKSTL------------GRVA 75 Query: 70 SGSMQFLRRSGQSLDLAQADNATMRSIRGAE----IAMIFQEPMTSLNPVFTVGEQIAES 125 G L S + + D A++ S AE + MIFQ P SLNP + + + E+ Sbjct: 76 CG---LLDPSDGQVLVNGRDRASLSSREEAEARLQVQMIFQNPYASLNPRLRIDQIVGEA 132 Query: 126 IRLHQGMSRAAAQAEALRMLEMVRIPEAKRVLGRHPHQLSGGMRQRVMIAMALSCKPSLL 185 +++ + + +++R + R+PHQ SGG RQR+ IA AL+ +P +L Sbjct: 133 AQVN---GKVEGDLDDYVCQQLLRAGLDPALRDRYPHQFSGGQRQRIGIARALAVQPQML 189 Query: 186 IADEPTTALDVTIQAQILQLIRSLQQEMQMGVIFITHDMGVVAEVADRVVVMCRGEKVEE 245 + DE ALDV+IQAQIL L L+ E+ + +FI+HD+GVV V+DRVV+M G VE Sbjct: 190 VCDEAVAALDVSIQAQILNLFMDLRAELGLTYLFISHDLGVVEHVSDRVVIMYLGRVVES 249 Query: 246 NEVKTLFAAPVHPYTQSLLAAVPRLGSMR 274 V LF P HPYTQ+LLA VPR+G+ + Sbjct: 250 APVAELFGQPNHPYTQALLAEVPRMGARK 278 Database: BlastDatabases/689/689 Posted date: Apr 10, 2011 12:15 AM Number of letters in database: 1,619,870 Number of sequences in database: 4735 Lambda K H 0.321 0.136 0.379 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 4735 Number of Hits to DB: 1,798,976 Number of extensions: 73981 Number of successful extensions: 857 Number of sequences better than 1.0e-08: 128 Number of HSP's gapped: 621 Number of HSP's successfully gapped: 248 Length of query: 617 Length of database: 1,619,870 Length adjustment: 91 Effective length of query: 526 Effective length of database: 1,188,985 Effective search space: 625406110 Effective search space used: 625406110 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 133 (55.8 bits)