BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0028.0149.p
         (170 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300311189|ref|YP_003775281.1| serine O-acetyltransferase [Her...   310   4e-86
gi|300311650|ref|YP_003775742.1| serine O-acetyltransferase [Her...   140   4e-35
gi|300310909|ref|YP_003775001.1| serine O-acetyltransferase [Her...   135   1e-33
gi|300311326|ref|YP_003775418.1| serine O-acetyltransferase [Her...    54   9e-09

>gi|300311189|ref|YP_003775281.1| serine O-acetyltransferase
           [Herbaspirillum seropedicae SmR1]
          Length = 250

 Score =  310 bits (794), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 152/161 (94%), Positives = 156/161 (96%)

Query: 1   MFSRLREDIASIRERDPAARNSWEVLTCYPGLHAVILHRWAQACWKAELKWLGRFISQLG 60
           MFSRLREDIASIR RDPAARNSWEVLTCYPGLHA+ILHRWA+ACW+A+LKWLGRFISQLG
Sbjct: 1   MFSRLREDIASIRARDPAARNSWEVLTCYPGLHALILHRWAKACWQAQLKWLGRFISQLG 60

Query: 61  RTLTGIEIHPGATIGRRVFIDHGMGVVIGETAIVGDDSTIYQGVTLGGTSLAKGAKRHPT 120
           R LTGIEIHPGATIGRRVFIDHGMGVVIGETAIVGDDSTIYQGVTLGGTSL KGAKRHPT
Sbjct: 61  RMLTGIEIHPGATIGRRVFIDHGMGVVIGETAIVGDDSTIYQGVTLGGTSLVKGAKRHPT 120

Query: 121 LGRGVIIGAGAKVLGGFTVGDGAKVGSNAVVTKEVPAGGVA 161
           LGRGVIIGAGAKVLGGFTVGDGAKVGSNAVVTKEVPAG  A
Sbjct: 121 LGRGVIIGAGAKVLGGFTVGDGAKVGSNAVVTKEVPAGTTA 161


>gi|300311650|ref|YP_003775742.1| serine O-acetyltransferase
           [Herbaspirillum seropedicae SmR1]
          Length = 307

 Score =  140 bits (354), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 78/164 (47%), Positives = 101/164 (61%), Gaps = 8/164 (4%)

Query: 3   SRLREDIASIRERDPAARNSWEVLTCYPGLHAVILHRWAQACWKAELKWLGRFISQLGRT 62
           S+L  D+ +  + DPAAR+  EVL CYPG  A+I +R A   ++  L  L R I++L   
Sbjct: 124 SQLDTDVLAAYQGDPAARSVDEVLLCYPGALAMIHYRLAHRLYQLGLPLLARIIAELAHA 183

Query: 63  LTGIEIHPGATIGRRVFIDHGMGVVIGETAIVGDDSTIYQGVTLGGT--------SLAKG 114
            TGI+IHPGA IG   FIDHG GVVIGETA++G++  IYQ VTLG           L KG
Sbjct: 184 ATGIDIHPGAQIGTGFFIDHGTGVVIGETAVIGNNVRIYQAVTLGAKRFPTDADGKLEKG 243

Query: 115 AKRHPTLGRGVIIGAGAKVLGGFTVGDGAKVGSNAVVTKEVPAG 158
             RHP +   V+I AGA +LG   +G GA +G N  +T +VPAG
Sbjct: 244 RARHPIVEDDVVIYAGATILGRIRLGRGAVIGGNVWLTHDVPAG 287


>gi|300310909|ref|YP_003775001.1| serine O-acetyltransferase
           [Herbaspirillum seropedicae SmR1]
          Length = 311

 Score =  135 bits (341), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 74/163 (45%), Positives = 94/163 (57%), Gaps = 8/163 (4%)

Query: 5   LREDIASIRERDPAARNSWEVLTCYPGLHAVILHRWAQACWKAELKWLGRFISQLGRTLT 64
           L  DI +    DPAA +  E+L CYPG  A+I HR A A  +     L R I+ +  + T
Sbjct: 135 LVSDIQAAYHGDPAASSISEILLCYPGTTAIIYHRLAHALHQLGAPLLARLIADIAHSAT 194

Query: 65  GIEIHPGATIGRRVFIDHGMGVVIGETAIVGDDSTIYQGVTLGGT--------SLAKGAK 116
           GI+IHP A IG   FIDHG GVVIGET I+G +  +YQ VTLG          SL KG  
Sbjct: 195 GIDIHPAAQIGPSFFIDHGTGVVIGETTIIGRNVRLYQAVTLGAKRFPQEPDGSLVKGIP 254

Query: 117 RHPTLGRGVIIGAGAKVLGGFTVGDGAKVGSNAVVTKEVPAGG 159
           RHP +   V++ AGA +LG  T+G G+ +G N  +T  VPAG 
Sbjct: 255 RHPIVEDDVVVYAGATLLGRITIGRGSVIGGNVWLTHSVPAGS 297


>gi|300311326|ref|YP_003775418.1| serine O-acetyltransferase
           [Herbaspirillum seropedicae SmR1]
          Length = 188

 Score = 53.5 bits (127), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 38/105 (36%), Positives = 55/105 (52%), Gaps = 3/105 (2%)

Query: 58  QLGRTLTGIEIHPGATIGRRVFIDHGMGVVIGETAIVGDDSTIYQGVTLGGTSLAKGAKR 117
           +L  T+ GI +   A IG  + I H   + +    ++G   T+ QGVT+G     +    
Sbjct: 59  RLVETVFGISLPRTARIGPGLRIWHFGNIFLHGDVVIGAGCTLRQGVTIGNR---REGGP 115

Query: 118 HPTLGRGVIIGAGAKVLGGFTVGDGAKVGSNAVVTKEVPAGGVAT 162
            P LG  V +GA A+VLG   +GDG KVG+ +VV  +VP G  A 
Sbjct: 116 VPVLGDNVELGAYAQVLGAVHLGDGCKVGAMSVVLDDVPPGATAV 160


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.321    0.139    0.433 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 629,449
Number of extensions: 29159
Number of successful extensions: 136
Number of sequences better than 1.0e-08: 4
Number of HSP's gapped: 129
Number of HSP's successfully gapped: 4
Length of query: 170
Length of database: 1,619,870
Length adjustment: 79
Effective length of query: 91
Effective length of database: 1,245,805
Effective search space: 113368255
Effective search space used: 113368255
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 127 (53.5 bits)