BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0027.0046.p
         (281 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300313576|ref|YP_003777668.1| lauroyl/myristoyl acyltransfera...   498   e-142
gi|300313577|ref|YP_003777669.1| lipid A biosynthesis lauroyl ac...    72   6e-14

>gi|300313576|ref|YP_003777668.1| lauroyl/myristoyl acyltransferase
           [Herbaspirillum seropedicae SmR1]
          Length = 282

 Score =  498 bits (1283), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 243/280 (86%), Positives = 259/280 (92%)

Query: 1   MLVSLFRLLSFLPLPALHALGVVVGWLVFLLSPAYRRRLTDNITLAGHRGSLWKSVGEAG 60
           MLVSLFRLLSFLPLPALHA+GVVVGWLVFLLSP+YRRRL  NITLAGH  SL+++VGEAG
Sbjct: 1   MLVSLFRLLSFLPLPALHAIGVVVGWLVFLLSPSYRRRLRSNITLAGHGASLYRAVGEAG 60

Query: 61  KGMFELPFIWCARPERVLRTARIVNWDLVQQALDAKAGIVFLTPHLGCFEISAQSVARHH 120
           KGMFELPFIWCA P RVLRTARIVNW+LVQQAL  K+G++FLTPHLGCFEI+AQ VARH 
Sbjct: 61  KGMFELPFIWCASPRRVLRTARIVNWELVQQALATKSGVIFLTPHLGCFEIAAQVVARHT 120

Query: 121 SLSVLYRPPRKAALKPLIEGARARANLHLAPANLSGVRILLKALKNGQAIGLLPDQVPQN 180
           SLSVLYRPPRKAALKPLIEGARARANLHLAPANL+GVRILLKALK GQAIGLLPDQVPQN
Sbjct: 121 SLSVLYRPPRKAALKPLIEGARARANLHLAPANLAGVRILLKALKTGQAIGLLPDQVPQN 180

Query: 181 GEGVWADFFGKPAYTMTLPAKLQQMSGAPIILAYAERLSWGRGYAIHFVAFEGELGETPE 240
           GEGVWA FFGKPAYTMTL AKLQQMSGAP++L YA+RLSWGRGYAIHFV FEG L  TPE
Sbjct: 181 GEGVWAGFFGKPAYTMTLSAKLQQMSGAPLLLTYAQRLSWGRGYAIHFVPFEGALDGTPE 240

Query: 241 QQARAINAAMEKLIARCPAQYIWSYNRYKTPPGVTAPGAA 280
           QQA+AINAAME LIARCPAQYIWSYNRYKTPPGV+ PG A
Sbjct: 241 QQAQAINAAMEALIARCPAQYIWSYNRYKTPPGVSRPGEA 280


>gi|300313577|ref|YP_003777669.1| lipid A biosynthesis lauroyl
           acyltransferase [Herbaspirillum seropedicae SmR1]
          Length = 294

 Score = 72.0 bits (175), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 80/290 (27%), Positives = 130/290 (44%), Gaps = 25/290 (8%)

Query: 1   MLVSLFRLLSFLPLPALHALGVVVGWLVFLLSPAYRRRLTDNITLAGHRGSLWKSVGEA- 59
           +L+++  LL +LPLP L  LG  +G L++L     R     N+ L     +  + V  A 
Sbjct: 3   LLLAIMWLLHWLPLPILGRLGEGIGSLLYLYMRPRRHIALTNLRLCFPEKTEEERVSIAR 62

Query: 60  ------GKGMFELPFIWCARPERVLRTARIVNWDLVQQALD--AKAGIVFLTPHLGCFEI 111
                  +   E   +W A   R+ R  ++         LD  AK   + L PH  C EI
Sbjct: 63  EHFRLFARSALERGILWWAPISRLRRLIQVEP----GMPLDTFAKGPTILLAPHFVCLEI 118

Query: 112 SAQS--VARHHSLSVLYRPPRKAALKPLIEGARARANLHLAPANL----SGVRILLKALK 165
              +  V   +S   +Y   R      +I+ A  +  L   PA L     GV+ +++A++
Sbjct: 119 PGATLGVFSEYSACTIYTKQRND----VIDRALLKGRLRFRPATLLAREQGVKPIIRAMR 174

Query: 166 NGQAIGLLPDQVPQNGEGVWADFFGKPAYTMTLPAKLQQMSGAPIILAYAERLSWGRGY- 224
            G    +LPD      +  +  FFG PA T+T  A++   +GA ++      L   +G+ 
Sbjct: 175 KGLPFLMLPDMDFGIRDAEFVPFFGVPAATLTATARIAAATGAAVVPVVCTFLPDYKGWK 234

Query: 225 AIHFVAFEGELGETPEQQARAINAAMEKLIARCPAQYIWSYNRYKT-PPG 273
           A ++ A+    GE      R +NA +E  +   PA+Y W++ R+KT PPG
Sbjct: 235 ATYYPAWTDYPGEDIVAATRRMNAFIEDRVREHPAEYFWAHKRFKTRPPG 284


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.324    0.138    0.432 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 904,058
Number of extensions: 40192
Number of successful extensions: 124
Number of sequences better than 1.0e-08: 2
Number of HSP's gapped: 122
Number of HSP's successfully gapped: 2
Length of query: 281
Length of database: 1,619,870
Length adjustment: 84
Effective length of query: 197
Effective length of database: 1,222,130
Effective search space: 240759610
Effective search space used: 240759610
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 130 (54.7 bits)