BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0027.0045.p
         (261 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300313577|ref|YP_003777669.1| lipid A biosynthesis lauroyl ac...   385   e-108
gi|300313576|ref|YP_003777668.1| lauroyl/myristoyl acyltransfera...    68   6e-13

>gi|300313577|ref|YP_003777669.1| lipid A biosynthesis lauroyl
           acyltransferase [Herbaspirillum seropedicae SmR1]
          Length = 294

 Score =  385 bits (990), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 196/289 (67%), Positives = 218/289 (75%), Gaps = 33/289 (11%)

Query: 1   MRALIGLMWLLHWLPLPILGRLGEALGWLLYIYMRPRRRITLINLRLCFPEKSEEERRLI 60
           MR L+ +MWLLHWLPLPILGRLGE +G LLY+YMRPRR I L NLRLCFPEK+EEER  I
Sbjct: 1   MRLLLAIMWLLHWLPLPILGRLGEGIGSLLYLYMRPRRHIALTNLRLCFPEKTEEERVSI 60

Query: 61  ARRHFQAYARSALERGILWWAPESRLKRLIQVEPGIPFETLDKGPTILLCPHFVCLEIPG 120
           AR HF+ +ARSALERGILWWAP SRL+RLIQVEPG+P +T  KGPTILL PHFVCLEIPG
Sbjct: 61  AREHFRLFARSALERGILWWAPISRLRRLIQVEPGMPLDTFAKGPTILLAPHFVCLEIPG 120

Query: 121 IALVLNSDYSVCTIYSRQQNEVVDQALLKGRSRFRPVTLLAREKGVKPIIRAMREGLPFI 180
             L + S+YS CTIY++Q+N+V+D+ALLKGR RFRP TLLARE+GVKPIIRAMR+GLPF+
Sbjct: 121 ATLGVFSEYSACTIYTKQRNDVIDRALLKGRLRFRPATLLAREQGVKPIIRAMRKGLPFL 180

Query: 181 MLPDMDFGTRDAEFVPFFGVP---------------------------------AATLTA 207
           MLPDMDFG RDAEFVPFFGVP                                 A    A
Sbjct: 181 MLPDMDFGIRDAEFVPFFGVPAATLTATARIAAATGAAVVPVVCTFLPDYKGWKATYYPA 240

Query: 208 TARIAAXDIVAATRRMNAFIEERVLEAPAEYFWAHKRFKNRPPGEPDVY 256
                  DIVAATRRMNAFIE+RV E PAEYFWAHKRFK RPPGEPDVY
Sbjct: 241 WTDYPGEDIVAATRRMNAFIEDRVREHPAEYFWAHKRFKTRPPGEPDVY 289


>gi|300313576|ref|YP_003777668.1| lauroyl/myristoyl acyltransferase
           [Herbaspirillum seropedicae SmR1]
          Length = 282

 Score = 68.2 bits (165), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 72/294 (24%), Positives = 119/294 (40%), Gaps = 53/294 (18%)

Query: 4   LIGLMWLLHWLPLPILGRLGEALGWLLYIYMRPRRRITLINLRLCFPEKSEEERRLIARR 63
           L+ L  LL +LPLP L  +G  +GWL+++     RR    N+ L     S         R
Sbjct: 2   LVSLFRLLSFLPLPALHAIGVVVGWLVFLLSPSYRRRLRSNITLAGHGAS-------LYR 54

Query: 64  HFQAYARSALERGILWWAPESRLKRLIQVEPGIPFETLD-----KGPTILLCPHFVCLEI 118
                 +   E   +W A   R+ R  ++   + +E +      K   I L PH  C EI
Sbjct: 55  AVGEAGKGMFELPFIWCASPRRVLRTARI---VNWELVQQALATKSGVIFLTPHLGCFEI 111

Query: 119 PGIALVLNSDYSVCTIYSRQQNEVVDQALLKGRSRFRPVTLLAREKGVKPIIRAMREGLP 178
              A V+    S+  +Y   +   +   +   R+R       A   GV+ +++A++ G  
Sbjct: 112 --AAQVVARHTSLSVLYRPPRKAALKPLIEGARARANLHLAPANLAGVRILLKALKTGQA 169

Query: 179 FIMLPDMDFGTRDAEFVPFFGVPAATLTATARI----AAXDIVAATRRM----------- 223
             +LPD      +  +  FFG PA T+T +A++     A  ++   +R+           
Sbjct: 170 IGLLPDQVPQNGEGVWAGFFGKPAYTMTLSAKLQQMSGAPLLLTYAQRLSWGRGYAIHFV 229

Query: 224 -----------------NAFIEERVLEAPAEYFWAHKRFKNRPPGEPDVYRKGQ 260
                            NA +E  +   PA+Y W++ R+K  PPG   V R G+
Sbjct: 230 PFEGALDGTPEQQAQAINAAMEALIARCPAQYIWSYNRYKT-PPG---VSRPGE 279


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.328    0.143    0.453 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 806,062
Number of extensions: 30371
Number of successful extensions: 96
Number of sequences better than 1.0e-08: 2
Number of HSP's gapped: 94
Number of HSP's successfully gapped: 2
Length of query: 261
Length of database: 1,619,870
Length adjustment: 83
Effective length of query: 178
Effective length of database: 1,226,865
Effective search space: 218381970
Effective search space used: 218381970
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 129 (54.3 bits)