BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0024.0070.p (799 letters) Database: BlastDatabases/689/689 4735 sequences; 1,619,870 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|300310098|ref|YP_003774190.1| VGR-related protein [Herbaspiri... 1233 0.0 gi|300310083|ref|YP_003774175.1| VGR-related type VI secretion s... 305 7e-84 gi|300310071|ref|YP_003774163.1| VGR-related protein [Herbaspiri... 276 4e-75 gi|300313606|ref|YP_003777698.1| VGR-related type VI secretion s... 260 3e-70 gi|300310274|ref|YP_003774366.1| VGR-related protein [Herbaspiri... 247 3e-66 >gi|300310098|ref|YP_003774190.1| VGR-related protein [Herbaspirillum seropedicae SmR1] Length = 982 Score = 1233 bits (3190), Expect = 0.0, Method: Compositional matrix adjust. Identities = 599/760 (78%), Positives = 668/760 (87%), Gaps = 1/760 (0%) Query: 1 MSELLNQLVQFTSATRLYRLSLGECVAAGDLLVEAFAASEGLHAVGVREVIALSLNAGLS 60 MS+LL QL+QFT A+RLY LSLG+ AG+LLVEAFAASEGLHAVG+REVI LSL+AGL Sbjct: 1 MSDLLTQLMQFTGASRLYSLSLGDAAPAGELLVEAFAASEGLHAVGLREVIVLSLDAGLR 60 Query: 61 LNTLIGQRASLQVSLSDGSSASFSGLVNEAAKLGSEGGFARYRLRLVPWIWLLSQSRNSR 120 L +LIGQRA+L +LSDGS FSGLVNEAAKLGSEGG ARYRLR+VPW+WLLSQS NSR Sbjct: 61 LKSLIGQRATLVTTLSDGSRTQFSGLVNEAAKLGSEGGLARYRLRIVPWVWLLSQSHNSR 120 Query: 121 VWQDKSVVEIIEDVFAAYTPHADWHWSDDVMPFLQDLPPRSYTVQYRESDLDFVSRVLAA 180 VWQDK+V++I+EDVFA Y PHA W W+D+V PF+Q + PRSYT+QYRES+L FVSR+LAA Sbjct: 121 VWQDKTVIDIVEDVFADYAPHAAWTWTDEVAPFMQQVQPRSYTIQYRESNLAFVSRLLAA 180 Query: 181 EGLSWRVEESGEASAGHRLVLFADSSRNTAFPEDASSAAGLGGQGIRFHAGGAREEQDSI 240 EGLSWRVEES +A++GHRLVLFADS+ AFPED +S + LGG GIRFHAG AREEQDSI Sbjct: 181 EGLSWRVEESADAASGHRLVLFADSTSPRAFPEDLTSTSPLGGSGIRFHAGTAREEQDSI 240 Query: 241 QALAARRALQPASFTLLSYDDKSKQAVATSMPTRHAFGHQDAPRLESYDSPGLYAYRNAA 300 QALAARRALQPASFTLLSYD KSKQAVATS+PTRH FG +DAPRLESYDSPGLYAY +AA Sbjct: 241 QALAARRALQPASFTLLSYDYKSKQAVATSLPTRHEFGGKDAPRLESYDSPGLYAYTDAA 300 Query: 301 EADRYAQLHLEASEARNKLWQARSTVRTLRPGTRFTLTQGPLGLSAAAGKAP-EYAVLSV 359 EAD YA+LHLEASEARNKLWQARSTVRTLRPGTRFTL GPLGLSAA AP +YAVLSV Sbjct: 301 EADHYARLHLEASEARNKLWQARSTVRTLRPGTRFTLADGPLGLSAAQDGAPRQYAVLSV 360 Query: 360 VSAGVNNLPKDAQEGLAELFGSLPPLLEECLAACQSLQQTVQGSLHPDSLAVSDRADLDA 419 +S GVNNLPKDA EGLAELFG +PPLLE+C+AAC+ Q + G PDSL + + D+ Sbjct: 361 MSVGVNNLPKDAAEGLAELFGPIPPLLEDCVAACEEGQSLLHGQSGPDSLQLLGQTDIAG 420 Query: 420 VIAQARKLGYANAFEAIRADVVWRPVLADGTGLYRHAGATARGSQSAIVVGPNGESTANG 479 VIAQAR+LGYANAFEAIRADV+WRPVLADGTGL HA ATARGSQSAIVVGP GE++A+ Sbjct: 421 VIAQARQLGYANAFEAIRADVIWRPVLADGTGLRLHARATARGSQSAIVVGPQGETSASS 480 Query: 480 ADEIHCDRLGRVRIRFHWQGRNNDAAATCWVRVAQRSAGGGNGMQFLPRIGQEVLVQFLE 539 A EIHCDRLGRVRIRFHWQGRNNDAAATCWVRVAQR+A GG GMQFLPRIGQEVLVQF+E Sbjct: 481 AGEIHCDRLGRVRIRFHWQGRNNDAAATCWVRVAQRAASGGAGMQFLPRIGQEVLVQFIE 540 Query: 540 DDIDRPVILGALYNGQGEGSAAPTPGGEAAQGGEQERNKVFTSASDLSPSGQGNLAGGNA 599 DDIDRPVI+GALYNG+GEG+AAPTPGG+ AQ G + + FTSA+DL SGQGNLAGGNA Sbjct: 541 DDIDRPVIVGALYNGRGEGAAAPTPGGDTAQAGSDDPARAFTSATDLQASGQGNLAGGNA 600 Query: 600 PTWHGGSQDGEGHRNAAAQWGIRSKEFGGAGYNQLLFDDTDAQGRIQLKTSQAASELNLG 659 PTWHGGSQD +GH N AAQWGIRSKEFGG+GYNQ++FDDTDAQGRIQLKT+Q+ SELNLG Sbjct: 601 PTWHGGSQDSDGHGNTAAQWGIRSKEFGGSGYNQIVFDDTDAQGRIQLKTTQSGSELNLG 660 Query: 660 HLIHAADNYRGSFRGTGAELRTDAYGALRAGSGILFSSYRIEHAAASRDPAGDNTGGMAL 719 HLIH ADNYRGSFRGTGAELRTDAYGALRAG GILFSSY+IE AASRDPAGDN GGMAL Sbjct: 661 HLIHTADNYRGSFRGTGAELRTDAYGALRAGGGILFSSYKIEQNAASRDPAGDNVGGMAL 720 Query: 720 LKQATLLGKTFNQAAVTHKTVAMASHVGPAQANASVINDS 759 LKQA LLGKTFN+A +THKTV +ASH+GP QA+AS INDS Sbjct: 721 LKQAALLGKTFNEATLTHKTVGLASHLGPTQASASTINDS 760 >gi|300310083|ref|YP_003774175.1| VGR-related type VI secretion system protein [Herbaspirillum seropedicae SmR1] Length = 944 Score = 305 bits (782), Expect = 7e-84, Method: Compositional matrix adjust. Identities = 242/689 (35%), Positives = 327/689 (47%), Gaps = 108/689 (15%) Query: 49 EVIALSLNAGLSLNTLIGQRASLQVSLSDGSSASFSGLVNEAAKLGSEGGFARYRLRLVP 108 ++ LSLNA +SL L+GQ L++ +DG + +F G V G+ GG ARY L + P Sbjct: 65 QLSCLSLNADISLRKLLGQPVLLELD-TDGGARAFHGHVTACRMEGANGGMARYLLTIEP 123 Query: 109 WIWLLSQSRNSRVWQDKSVVEIIEDVFAAYTPHADWH--WSDDVMPFLQD---LPPRSYT 163 W+ L R+S V+QD S IIE VFA Y W D LQD RS Sbjct: 124 WLSFLRHRRDSAVFQDMSAPAIIEAVFADYRGQGRLQPAWRLD----LQDASAYAKRSLA 179 Query: 164 VQYRESDLDFVSRVLAAEGLSWRVEESGE---ASAGHRLVLFADSSRNTAFPEDASSAAG 220 QY+E+DL FV+R++ EGL + +E G+ AS G V+ AD N +F +A S Sbjct: 180 TQYQETDLAFVTRLMVEEGLFYYIEHQGDSNSASLGSHTVVIAD--HNGSFKPNARST-- 235 Query: 221 LGGQGIRFHAGGAREEQDSIQALAARRALQPASFTLLSYDDKSKQAVATSMPTRHAFGHQ 280 + F A QD+I + R Q + +L++D + A S + H Sbjct: 236 -----VAFAQTNAVMAQDNIDRWRSVRRWQTNAVEILTWDYRQTAVRAASTASSGENAH- 289 Query: 281 DAPRLESYDSPGLYAYRNAAEADRYAQLHLEASEARNKLWQARSTVRTLRPGTRFTLTQG 340 D L S D+PG Y + +A R A ++A E RNK++ TVR+ PGT FTLT Sbjct: 290 DKLVLTSRDAPGQYINESPEQAQRQALNQMQAIEVRNKVFTGAGTVRSFLPGTTFTLTGH 349 Query: 341 PLGLSAAAGKAPEYAVLSVVSAGVNNLPKDAQEGLAELFGSLPPLLEECLAACQSLQQTV 400 G ++ +L VV NNL D + G+ L G Q Sbjct: 350 ---YDHDGGDDDQFVLLRVVHQAHNNLSADLKAGVTALLGQ-----------AQLDDHDH 395 Query: 401 QGSLHPDSLAVSDRADLDAVIAQARKLGYANAFEAIRADVVWRPVLADGTGLYRHAGATA 460 +GSL +L +D QAR + Y N FEAIR + +RP+L D G + A Sbjct: 396 KGSLLDTALRSAD--------TQARPV-YRNRFEAIRNKIPYRPLLVDAQGERLYPKPQA 446 Query: 461 RGSQSAIVVGPNGESTANGADEIHCDRLGRVRIRFHWQ------------------GRNN 502 G QSA+VVG G++ +H DR R+R++FHWQ G Sbjct: 447 HGQQSAVVVGAQGQA-------VHTDRDNRIRVQFHWQRGERSHSGLSSPTPDDHVGAPA 499 Query: 503 DAAATCWVRVAQ---RSAGGGNGMQFLPRIGQEVLVQFLEDDIDRPVILGALYNGQGEGS 559 + A WVRV +AG G Q +PR+GQEVL+ F+E DIDRPV++G LYNG+G + Sbjct: 500 NEQAGTWVRVLAGLAPTAGANWGGQAVPRVGQEVLIDFIEGDIDRPVVIGTLYNGRGVDN 559 Query: 560 AAPTPGGEAAQGGEQERNKVFTSASDLSPSGQGNLAGGNAPTWHGGSQDGEGHRNAAAQW 619 A G +A QG A GNAP W GS H +AA Sbjct: 560 AQ---GNQAGQG--------------------AGSATGNAPAWFPGSSG--AHNHAAVLS 594 Query: 620 GIRSKEF-----GGAGYNQLLFDDTDAQGRIQLK----TSQAASELNLGHLIHAADNYRG 670 GI+++ GG GYNQL+FDD+ Q R L+ ASELNLG L DN R Sbjct: 595 GIKTQALSASQSGGGGYNQLVFDDSPGQARAALQQHADAHDGASELNLGLLRQQTDNQRL 654 Query: 671 SFRGTGAELRTDAYGALRAGSGILFSSYR 699 + G G EL+T ALRAG G+L S+ + Sbjct: 655 ATTGQGFELKTLYSAALRAGQGLLVSTEK 683 >gi|300310071|ref|YP_003774163.1| VGR-related protein [Herbaspirillum seropedicae SmR1] Length = 954 Score = 276 bits (706), Expect = 4e-75, Method: Compositional matrix adjust. Identities = 237/752 (31%), Positives = 348/752 (46%), Gaps = 153/752 (20%) Query: 31 LLVEAFAASEGLHAVGVREVIALSLNAGLSLNTLIGQRASLQVSLSDGSSASFSGLVNEA 90 L VE F E ++ ++ ALS++ L L IG SL++ +DG + ++ G +A Sbjct: 42 LAVERFEGEESVNDNFRFDIDALSISTDLDLKQFIGAEISLRLLQADGGTRAWHGYCTQA 101 Query: 91 AKLGSEGGFARYRLRLVPWIWLLSQSRNSRVWQDKSVVEIIEDVFAAYTPHADWHWSDDV 150 + LG++GG ARYRLRL ++ L + +S ++QD +V +I V Y P A++ Sbjct: 102 SWLGADGGLARYRLRLESFLAFLDRRHDSFLFQDMTVTDIAAAVLKEY-PQANFS----- 155 Query: 151 MPFLQDLPPRSYTVQYRESDLDFVSRVLAAEGLSWRVE----------ESGEASAGHRLV 200 + Q L R QYRE+D F+ R+LA+EGL++R E + + A H+LV Sbjct: 156 LEVTQTLAKRDICTQYRETDYAFLRRILASEGLNFRFEHEQDDATQQHDQSQPHARHKLV 215 Query: 201 LFADSSRNTAFPEDASSAAGLGGQGIRFHAGGAREEQDSIQALAARRALQPASFTLLSYD 260 +F +++ A P G + IRFH A E D+I AA R+++P L S+ Sbjct: 216 IFDRNAKAPALPG--------GDEYIRFHRVAAMEASDAITDFAAVRSVRPNGVALASWH 267 Query: 261 DKSKQAVATSMPTRHAFGHQDA---PRLESYDSPGLYAYRNAAEADRYAQLHLEASEARN 317 + S P+ DA P L YD G + + A +AQL L+A E +N Sbjct: 268 PEK-----LSSPSHEEGSTLDAGELPSLPVYDGTGQQDFADQDAAAAHAQLMLQALEMQN 322 Query: 318 KLWQARSTVRTLRPGTRFTLTQG---PLGLSAAAGKAPEYAVLSVVSAGVNNLPKDAQEG 374 K ++ R L G RFTL Q P G +A + V+SV A NN+ + Sbjct: 323 KRFEGAGAARQLAAGARFTLLQHERYPEGENA-------FKVVSVRHAARNNVSANITRI 375 Query: 375 LAELFGSLPPLLEECLAACQSLQQTVQGSLHPDSLAVSDRADLDAVIAQARKLGYANAFE 434 LA G+L S A DL A Y N+F Sbjct: 376 LAP----------------------AAGALFGGSAAAERDDDLQAGT-------YRNSFT 406 Query: 435 AIRADVVWRPVLADGTGLYRHAGATARGSQSAIVVGPNGESTANGADEIHCDRLGRVRIR 494 AIR V P + TARG+Q+A+V G A+ A + DR RV+++ Sbjct: 407 AIRDSVPMVPA-----AIAERLKPTARGTQTALVTG-----AADAA--VTTDRNHRVKVQ 454 Query: 495 FHWQ----------------------GRNNDAAATCWVRVAQRSAGGGNGMQFLPRIGQE 532 FHWQ ND++ T W+RVA+ +G G QF+PR+G E Sbjct: 455 FHWQRGKSPNPGGLRETGNLDDKDGNANGNDSSGT-WIRVAEAQSGPNWGSQFIPRVGSE 513 Query: 533 VLVQFLEDDIDRPVILGALYNGQGEGSAAPTPGGEAAQGGEQERNKVFTSASDLSPSGQG 592 VLV F+E DIDRPV++ LYNG A P P G +D + G Sbjct: 514 VLVDFIEGDIDRPVVVAQLYNG---SDAPPFPAG-----------------ADSGINHAG 553 Query: 593 NLAGGNAPTWHGGSQDGEGHRNAAAQWGIRSKEFGGAGYNQLLFDDTDAQGRIQLKTSQA 652 +++G WH + D G+G+NQ + DDT +Q R++L +S A Sbjct: 554 SISG-----WHSTAHD-------------------GSGFNQWVVDDTQSQLRMRLASSTA 589 Query: 653 ASELNLGHLIHAADN--YRGSFRGTGAELRTDAYGALRAGSGILFSSY-RIEHAAASRDP 709 S+LNLGHL+ AD RGS+RG G ELR+DA+G +R G G+L S+ R + A+ Sbjct: 590 KSQLNLGHLVEQADTGAQRGSYRGQGFELRSDAWGVVRGGEGLLLSTTARPLNGASVTGT 649 Query: 710 AGDNTGGMALLKQATLLGKTFNQAAVTHKTVA 741 D G +A LK A L +T + +A + ++ Sbjct: 650 QMDAAGAIAQLKGAKSLAQTMSDSATQQQALS 681 >gi|300313606|ref|YP_003777698.1| VGR-related type VI secretion system protein [Herbaspirillum seropedicae SmR1] Length = 886 Score = 260 bits (664), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 226/723 (31%), Positives = 328/723 (45%), Gaps = 123/723 (17%) Query: 20 LSLGECVAAGDLLVEAFAASEGLHAVGVREVIALSLNAGLSLNTLIGQRASLQVSLSDGS 79 L L + LL + A+E L+ + L+ + G++L LI Q +L + DG Sbjct: 23 LQLDSSLGPDILLPQRLVATERLNDGYEVTIDLLATHTGIALEQLIAQPVTLWIRQHDGD 82 Query: 80 SASFSGLVNEAAKLGSEGGFARYRLRLVPWIWLLSQSRNSRVWQDKSVVEIIEDVFAAYT 139 + G V+ A +LGS+G +L L PW+ L +++R+WQDK +I+ DVF + Sbjct: 83 TLPLHGYVHTAKRLGSDGELDFCQLSLSPWLHFLRFRKDARIWQDKRTEDILADVFNNH- 141 Query: 140 PHADWHWSDDVMPFLQDLP--PRSYTVQYRESDLDFVSRVLAAEGLSWRV-EESGEASAG 196 P A H+ F + P PR Y QY E+D FV R++ EG W E E +G Sbjct: 142 PQARGHYR-----FQLERPYTPRPYCTQY-ETDWHFVQRLMEEEG--WFAHHEQREDGSG 193 Query: 197 HRLVLFADSSRNTAFPEDASSAAGLGGQGIRFHAGGAREEQDSIQALAARRALQPASFTL 256 H LV+ D++ N GL QGI FH R+E D I +A R L + Sbjct: 194 HVLVI-TDNTWNL---------PGLPQQGIAFHGAAPRDELDKILHWSASRTLSSKGWRG 243 Query: 257 LSYDDKS----KQAVATSMPTRHAFGHQDAPRLESYDSPGLYAYRNAAEADRYAQLHLEA 312 S D KS K+A MP +G A +LE Y+ G Y++R + +R A L +E Sbjct: 244 RSDDYKSPGMKKEAEEQVMP---EYGQLPA-QLEMYEYTGAYSFRLQEQGNRQADLQVEQ 299 Query: 313 SEARNKLWQARSTVRTLRPGTRFTLTQGPLGLSAAAGKAPEYAVLSVVSAGVNNLPKDAQ 372 E+ + + A S VR L G F L + P A + ++ +L++ NNLP Q Sbjct: 300 WESSMQRYSAVSGVRNLACGRWFRLEEHPQH-RAEPDRERQFVILAIDWFVENNLPLSHQ 358 Query: 373 EGLAELFGSLPPLLEECLAACQSLQQTVQGSLHPDSLAVSDRADLDAVIAQARKLGYANA 432 + GSL L +A +S+++ Q +A +D N Sbjct: 359 A--LDFPGSLKGAL---MAFKESIRRERQ-------VAETDNEHTGHCF---------NR 397 Query: 433 FEAIRADVVWRPVLADGTGLYRHAGATARGSQSAIVVGPNGESTANGADEIHCDRLGRVR 492 FE R + +RP A HA Q+AIVVGP E E++ D L R++ Sbjct: 398 FEVQRRKLPFRPARA-------HARPVML-PQTAIVVGPASE-------EVYTDHLDRIK 442 Query: 493 IRFHWQGRN-NDAAATCWVRVAQRSAGGGNGMQFLPRIGQEVLVQFLEDDIDRPVILGAL 551 ++F W N + AA+CWVRV+ +AG G +PRIGQEV+V FL D DRPV+ G L Sbjct: 443 VQFRWDRINPGNEAASCWVRVSYPNAGQYWGAIQVPRIGQEVIVSFLNGDPDRPVVTGRL 502 Query: 552 YNGQGEGSAAPTPGGEAAQGGEQERNKVFTSASDLSPSGQGNLAGGNAPTWHGGSQDGEG 611 +N + P WH + Sbjct: 503 FNAE------------------------------------------QRPQWHTNGRLS-- 518 Query: 612 HRNAAAQWGIRSKEFGGAGYNQLLFDDTDAQGRIQLKTSQAASELNLGHLIHAADNYRGS 671 G++SKEFGG G+NQ++ DDT Q RI L ++ ++LNLGHL+ N R S Sbjct: 519 --------GVKSKEFGGTGFNQMVMDDTPEQNRIHLYSTNTHAQLNLGHLVSQTGNERRS 570 Query: 672 FRGTGAELRTDAYGALRAGSGILFSSYRIEHAAASRDPAGDNTGGMALLKQATLLGKTFN 731 F G+G L TDAYGA+ G+ S+Y A ++ A + TG LK L +T + Sbjct: 571 FFGSGFALSTDAYGAIVTHKGLYISTYGRPGAQGTQLDAREATGQ---LKSGANLSRTLS 627 Query: 732 QAA 734 + A Sbjct: 628 ETA 630 >gi|300310274|ref|YP_003774366.1| VGR-related protein [Herbaspirillum seropedicae SmR1] Length = 928 Score = 247 bits (630), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 207/685 (30%), Positives = 303/685 (44%), Gaps = 117/685 (17%) Query: 20 LSLGECVAAGDLLVEAFAASEGLHAVGVREVIALSLNAGLSLNTLIGQRASLQVSLSDGS 79 L L + LL + SE L + +S + L LI Q +L + Sbjct: 35 LKLDSVLGPDVLLPQRMVGSERLGRGYDYTIDLVSTRDDIELKKLIAQPVTLWLQQDGSD 94 Query: 80 SASFSGLVNEAAKLGSEGGFARYRLRLVPWIWLLSQSRNSRVWQDKSVVEIIEDVFAAYT 139 A G V+ A +LGS+G A +++ + PW+ L +++R+WQD +I+ DVF + Sbjct: 95 YAPLHGYVHTARRLGSDGQLASFQIGMAPWLHFLKYRKDARIWQDSKADDILADVFDQHA 154 Query: 140 PHADWHWSDDVMPFLQDLPPRSYTVQYRESDLDFVSRVLAAEGLSWRVEESGEASAGHRL 199 + + V P L PRSY QY E+D FV R++ EG E+ + S GH L Sbjct: 155 YARGNYRFEIVTPAL----PRSYCTQY-ETDWHFVQRLMEEEGWYAYHEQKPDGS-GHVL 208 Query: 200 VLFADSSRNTAFPEDASSAAGLGGQGIRFHAGGAREEQDSIQALAARRALQPASFTLLSY 259 V+ ++ A L + + FH G ++E + I +A R L + Sbjct: 209 VI----------TDNTDQAKPLAPEQLAFHGAGTQDEVNRILHWSASRGLASTRLATRTD 258 Query: 260 DDKS----KQAVATSMPTRHAFGHQDAPRLESYDSPGLYAYRNAAEADRYAQLHLEASEA 315 D KS KQ +P A + LE Y+ G Y+Y + DR A+L +E E+ Sbjct: 259 DYKSPGDQKQTQERVLPEHGALPGE----LEVYEYSGPYSYAKQDDGDRQARLRVEQWES 314 Query: 316 RNKLWQARSTVRTLRPGTRFTLTQGPLGLSAAAGKAPEYAVLSVVSAGVNNLPKDAQEGL 375 K + S RTL G FTLT P + + ++ +++V NNLP G Sbjct: 315 SMKRFMGVSGARTLAAGRWFTLTDHP-AHRGDSKQDSQFMLIAVEWFIENNLP---LSGT 370 Query: 376 AELF-GSLPPLLEECLAACQSLQQTVQGSLHPDSLAVSDRADLDAVIAQARKLGYANAFE 434 A F GSL P L+ A+ G+ + Q RKL Y + F+ Sbjct: 371 ARDFPGSLKPQLDAFKASMGRSNDDAGGNARTGHC-------FNRFEVQRRKLPYRSPFD 423 Query: 435 AIRADVVWRPVLADGTGLYRHAGATARGSQSAIVVGPNGESTANGADEIHCDRLGRVRIR 494 +PV+ Q+A+VVGP GE E+ D+L RV+++ Sbjct: 424 HT------KPVMH---------------PQTAVVVGPQGE-------EVFTDKLNRVKVQ 455 Query: 495 FHWQGRN-NDAAATCWVRVAQRSAGGGNGMQFLPRIGQEVLVQFLEDDIDRPVILGALYN 553 F W N D A+CWVRV+ +AG G +PR+GQE+++ FL D DRPV G L+N Sbjct: 456 FRWDRINPGDEKASCWVRVSYPNAGENWGEVKVPRVGQELIISFLNGDPDRPVATGRLFN 515 Query: 554 GQGEGSAAPTPGGEAAQGGEQERNKVFTSASDLSPSGQGNLAGGNAPTWHGGSQDGEGHR 613 QE+ P WH DG Sbjct: 516 --------------------QEQ----------------------PPQWH---TDGRLS- 529 Query: 614 NAAAQWGIRSKEFGGAGYNQLLFDDTDAQGRIQLKTSQAASELNLGHLIHAADNYRGSFR 673 G++SKEFGG G+NQL+ DDT +Q R+ L +SQ+ ++LNLG+L+ ADN R +F Sbjct: 530 ------GLKSKEFGGNGFNQLVMDDTTSQNRVHLYSSQSNAQLNLGYLVSQADNERRNFY 583 Query: 674 GTGAELRTDAYGALRAGSGILFSSY 698 G+G L TD YGA+ G+ SSY Sbjct: 584 GSGFALSTDDYGAVVTQKGLYLSSY 608 Database: BlastDatabases/689/689 Posted date: Apr 10, 2011 12:15 AM Number of letters in database: 1,619,870 Number of sequences in database: 4735 Lambda K H 0.316 0.131 0.386 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 4735 Number of Hits to DB: 2,457,325 Number of extensions: 105562 Number of successful extensions: 387 Number of sequences better than 1.0e-08: 9 Number of HSP's gapped: 347 Number of HSP's successfully gapped: 16 Length of query: 799 Length of database: 1,619,870 Length adjustment: 93 Effective length of query: 706 Effective length of database: 1,179,515 Effective search space: 832737590 Effective search space used: 832737590 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 134 (56.2 bits)