BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0022.0270.p
         (396 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300309424|ref|YP_003773516.1| membrane-associated phospholipi...   327   8e-91

>gi|300309424|ref|YP_003773516.1| membrane-associated phospholipid
           phosphatase [Herbaspirillum seropedicae SmR1]
          Length = 479

 Score =  327 bits (839), Expect = 8e-91,   Method: Compositional matrix adjust.
 Identities = 185/200 (92%), Positives = 190/200 (95%)

Query: 1   VAWLLLLGPLFFLSYGFANHAAAARASVPSFFYGWERHIPFLPWTILPYWSIDLLYGFSF 60
           VAWLLLLGPLFFLSYGFANHAAAARASVPSFFYGWERHIPFLPWTILPYWSIDLLYGFSF
Sbjct: 29  VAWLLLLGPLFFLSYGFANHAAAARASVPSFFYGWERHIPFLPWTILPYWSIDLLYGFSF 88

Query: 61  LCCRTPRETDRHALRLLTTQLIAVACFLAFPLRFAFVRPATDGLFGALFASLAAFDLPFN 120
           LCCRT RETDRHALRLLTTQ+IAVACFLAFPLRFAF RPATDGLFGALFASL AFDLP+N
Sbjct: 89  LCCRTARETDRHALRLLTTQVIAVACFLAFPLRFAFERPATDGLFGALFASLTAFDLPYN 148

Query: 121 QAPSLHIALLVLIWVQFARLRTHWFWQLVIHGWALLIGLSVLTTWQHHFIDIPTGAMLGL 180
           QAPSLHIALLVLIWVQFARLR  W W+ +IHGWALLIGLSVLTTWQHHFIDIPTGAMLGL
Sbjct: 149 QAPSLHIALLVLIWVQFARLRASWPWRWLIHGWALLIGLSVLTTWQHHFIDIPTGAMLGL 208

Query: 181 FCLWLWPDEGGTPLRRGGGG 200
           FCLWLWPDEG TPL+R G G
Sbjct: 209 FCLWLWPDEGRTPLQRDGQG 228


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.327    0.141    0.556 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 1,282,368
Number of extensions: 50874
Number of successful extensions: 219
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 219
Number of HSP's successfully gapped: 1
Length of query: 396
Length of database: 1,619,870
Length adjustment: 87
Effective length of query: 309
Effective length of database: 1,207,925
Effective search space: 373248825
Effective search space used: 373248825
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 131 (55.1 bits)