BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0022.0187.p
         (336 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300309682|ref|YP_003773774.1| cell division actin-like ATPase...   668   0.0  

>gi|300309682|ref|YP_003773774.1| cell division actin-like ATPase
           [Herbaspirillum seropedicae SmR1]
          Length = 410

 Score =  668 bits (1724), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 332/341 (97%), Positives = 332/341 (97%), Gaps = 5/341 (1%)

Query: 1   MADCKIRNVYTGIAGSHIRSFNSSGMVAIKDKEVTAADVSRVIETAKAVNIPTDQQLLHT 60
           MADCKIRNVYTGIAGSHIRSFNSSGMVAIKDKEVTAADVSRVIETAKAVNIPTDQQLLHT
Sbjct: 70  MADCKIRNVYTGIAGSHIRSFNSSGMVAIKDKEVTAADVSRVIETAKAVNIPTDQQLLHT 129

Query: 61  VPQEFIVDNQEDVREPIGMSGIRLEVKVHIVTGAVSAVQNIVKCVRRCGLEVSDLILQPM 120
           VPQEFIVDNQEDVREPIGMSGIRLEVKVHIVTGAVSAVQNIVKCVRRCGLEVSDLILQPM
Sbjct: 130 VPQEFIVDNQEDVREPIGMSGIRLEVKVHIVTGAVSAVQNIVKCVRRCGLEVSDLILQPM 189

Query: 121 ASADSVLTTDERELGVVLVDIGGGTTDVAVFTEGAIRHTAVIPIAGDQITNDIAMALRTP 180
           ASADSVLTTDERELGVVLVDIGGGTTDVAVFTEGAIRHTAVIPIAGDQITNDIAMALRTP
Sbjct: 190 ASADSVLTTDERELGVVLVDIGGGTTDVAVFTEGAIRHTAVIPIAGDQITNDIAMALRTP 249

Query: 181 TLEAEEIKLRYGVAKQILADPTETLEVPGLGDRNPRTLSRQALAAVIEPRVEELFALVHQ 240
           TLEAEEIKLRYGVAKQILADPTETLEVPGLGDRNPRTLSRQALAAVIEPRVEELFALVHQ
Sbjct: 250 TLEAEEIKLRYGVAKQILADPTETLEVPGLGDRNPRTLSRQALAAVIEPRVEELFALVHQ 309

Query: 241 VVRESGYEEVLSSGIVLTGGSAMMPGMTELAEDIFLKPARLGTPEYS-----VFGVGRYS 295
           VVRESGYEEVLSSGIVLTGGSAMMPGMTELAEDIFLKPARLGTPEYS     V    RYS
Sbjct: 310 VVRESGYEEVLSSGIVLTGGSAMMPGMTELAEDIFLKPARLGTPEYSGQLADVVRSPRYS 369

Query: 296 TVLGLLQEAKKQYLRGYIVTRQEGSVKAVWQRMKEWFLGNF 336
           TVLGLLQEAKKQYLRGYIVTRQEGSVKAVWQRMKEWFLGNF
Sbjct: 370 TVLGLLQEAKKQYLRGYIVTRQEGSVKAVWQRMKEWFLGNF 410


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.318    0.135    0.378 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 1,012,968
Number of extensions: 41861
Number of successful extensions: 136
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 136
Number of HSP's successfully gapped: 1
Length of query: 336
Length of database: 1,619,870
Length adjustment: 86
Effective length of query: 250
Effective length of database: 1,212,660
Effective search space: 303165000
Effective search space used: 303165000
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 131 (55.1 bits)