BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0021.0088.p
         (310 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300312099|ref|YP_003776191.1| carboxylesterase [Herbaspirillu...   564   e-162

>gi|300312099|ref|YP_003776191.1| carboxylesterase [Herbaspirillum
           seropedicae SmR1]
          Length = 303

 Score =  564 bits (1454), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 276/309 (89%), Positives = 290/309 (93%), Gaps = 7/309 (2%)

Query: 1   MDSLSSTDTSSPASTAAEPAEQRQAEERHGGPHKEHAVILLHGLCGSQLEMGSIPKQLKK 60
           MD+LSSTD   P +    PAE RQ     GGPHKEHAVILLHGLCGSQLEMGSIPKQLKK
Sbjct: 1   MDTLSSTDHPGPVTPP--PAEDRQ-----GGPHKEHAVILLHGLCGSQLEMGSIPKQLKK 53

Query: 61  AGCTVIPLNIDNYSAALTNPRVSPNWEDWCAVVESRVARLKEEFRTVSLCGLSMGATLAL 120
           AGCTVIPLNIDNYSAALTNPRVSPNWE+WCAVVESRVARLKEEFRTVSLCGLSMGATLAL
Sbjct: 54  AGCTVIPLNIDNYSAALTNPRVSPNWEEWCAVVESRVARLKEEFRTVSLCGLSMGATLAL 113

Query: 121 AVAARSKELLSVVLLSPVLQYDGWSVPWYWKMLTVVYDMGVRNWSYKESEPYGIKNYEMR 180
           AVAARSKELLSVVLLSPVLQYDGWSVPWYWK+LTVVYD+G RNWSYKESEPYGIKN+EMR
Sbjct: 114 AVAARSKELLSVVLLSPVLQYDGWSVPWYWKLLTVVYDLGFRNWSYKESEPYGIKNFEMR 173

Query: 181 RRVAAALEKDGVAAVGAASIPARHLRAALRMIAFVRKSLPLVRTDTLIIHSIDDETASPR 240
           RRVA+ALEKDGVAAVGAASIPARHLRAALRMI +V++SLPLVRTDTLIIHSIDDETASPR
Sbjct: 174 RRVASALEKDGVAAVGAASIPARHLRAALRMIDYVKQSLPLVRTDTLIIHSIDDETASPR 233

Query: 241 NAELILQQINAEVRKVVWLGDCYHIITVDNEREIVTNETVMFIKRSIEIHGNEMSRKYLA 300
           NAE ILQ INAEVRKVVWLGDCYHIITVDNEREIVTNETVMFI+RSIE+HG+E SRK+LA
Sbjct: 234 NAEQILQYINAEVRKVVWLGDCYHIITVDNEREIVTNETVMFIRRSIEMHGHEFSRKHLA 293

Query: 301 HASPLKDRR 309
           HASPLKDRR
Sbjct: 294 HASPLKDRR 302


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.318    0.131    0.390 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 819,479
Number of extensions: 29996
Number of successful extensions: 121
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 121
Number of HSP's successfully gapped: 1
Length of query: 310
Length of database: 1,619,870
Length adjustment: 85
Effective length of query: 225
Effective length of database: 1,217,395
Effective search space: 273913875
Effective search space used: 273913875
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 130 (54.7 bits)