BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0021.0052.p
         (263 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300312024|ref|YP_003776116.1| esterase [Herbaspirillum serope...   411   e-116

>gi|300312024|ref|YP_003776116.1| esterase [Herbaspirillum
           seropedicae SmR1]
          Length = 282

 Score =  411 bits (1057), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 201/242 (83%), Positives = 220/242 (90%), Gaps = 3/242 (1%)

Query: 1   MLETLSEHGCFGGVQGFYRHASPAIGLDMRFSVFVPPQAGQGGGKLPVLFYLAGLTCTEE 60
           MLETLSEHGCFGGVQG+YRHASPAIGLDMRFSVFVPPQA +G   LPVLFYLAGLTCTEE
Sbjct: 1   MLETLSEHGCFGGVQGYYRHASPAIGLDMRFSVFVPPQASKGS-PLPVLFYLAGLTCTEE 59

Query: 61  TFMIKAGAQRVAAELGLILVACDTSPRGAGIAGESDSWDFGVGAGFYLDATQAPWSRHYR 120
           TFMIKAGAQRVAAELG+ILVA DTSPRGAGIAGESDSWDFGVGAGFYLDATQAPWS+HYR
Sbjct: 60  TFMIKAGAQRVAAELGMILVASDTSPRGAGIAGESDSWDFGVGAGFYLDATQAPWSQHYR 119

Query: 121 MESYVVEDLRRAVLDRFPADPQRMGIFGHSMGGHGALTLALRHRDLYRSVSAFAPIAAPV 180
           MESYVV+DLRRAVLD FPADPQRMG+FGHSMGGHGALTLALRHRD+YRSVSAFAPIAAP+
Sbjct: 120 MESYVVDDLRRAVLDNFPADPQRMGVFGHSMGGHGALTLALRHRDVYRSVSAFAPIAAPI 179

Query: 181 HCPWGQKAFSHYLGEDQESWQAHDASELMRKLYAPFPQGILIX--IRNRSGAGRQIPDRA 238
           +C WGQKAFSHYLG D+++W+ HDASELMR L  PFPQGILI   + ++  A + +P+R 
Sbjct: 180 NCAWGQKAFSHYLGTDRQAWKQHDASELMRALQTPFPQGILIDQGLADKFLAEQLLPERF 239

Query: 239 AA 240
            A
Sbjct: 240 EA 241


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.322    0.138    0.435 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 959,496
Number of extensions: 44836
Number of successful extensions: 119
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 118
Number of HSP's successfully gapped: 1
Length of query: 263
Length of database: 1,619,870
Length adjustment: 83
Effective length of query: 180
Effective length of database: 1,226,865
Effective search space: 220835700
Effective search space used: 220835700
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 129 (54.3 bits)