BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0021.0020.p
         (382 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300311994|ref|YP_003776086.1| acetyl-CoA carboxylase beta sub...   506   e-144

>gi|300311994|ref|YP_003776086.1| acetyl-CoA carboxylase beta
           subunit [Herbaspirillum seropedicae SmR1]
          Length = 298

 Score =  506 bits (1302), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 267/298 (89%), Positives = 279/298 (93%)

Query: 85  MSASYLEATARERILAVLDAGSFKELLPPAQRVVSPHLGQLDAPVSFDDGVIIGEGLLGG 144
           MSASYLEATARERILAVLDAGSF+ELLPPAQRVVSPHLGQLDAPVSFDDGVIIG G L G
Sbjct: 1   MSASYLEATARERILAVLDAGSFEELLPPAQRVVSPHLGQLDAPVSFDDGVIIGAGRLDG 60

Query: 145 RAVMAAAQEGGFMGGAVGEVHGAKLVGLLKRAMARQAAGVILLLETGGVRLHEANAGLIA 204
           +AVMAAAQEGGFMGGAVGEVHGAKLVGLL+RA+ +QAAGVILLLETGGVRLHEANAGLIA
Sbjct: 61  QAVMAAAQEGGFMGGAVGEVHGAKLVGLLRRAVVKQAAGVILLLETGGVRLHEANAGLIA 120

Query: 205 VSEVMRAVLEARAAGIPVIVLVGGANGCFGGMGIVARCANTIIMSEEGRLAMSGPEVIET 264
           VSEVMRAVLE RAAGIPVIVLVGGANGCFGGMGIVARCANT+IMSEEGRLAMSGPEVIET
Sbjct: 121 VSEVMRAVLETRAAGIPVIVLVGGANGCFGGMGIVARCANTVIMSEEGRLAMSGPEVIET 180

Query: 265 ANGVEEFDSRDRALVWRTTGGKHRYLIGDCQQLVSDDIDAFRTAAIAALSAVSDAKLTLA 324
           ANGVEEFDSRDRALVWRTTGGKHRYLIGDCQQLVSDD  AFR AAIAAL+ VS  +LTLA
Sbjct: 181 ANGVEEFDSRDRALVWRTTGGKHRYLIGDCQQLVSDDTAAFRAAAIAALAQVSAPQLTLA 240

Query: 325 GLEAEQEMLRRRIATFGHAEDPMDIWAELGVARPETVPMLEAAAFTAMAERLRIVSKA 382
            LEAEQEMLRRRIATFG A+DPMDIWAELGV RP++VPMLEA AFTAMA+  RI S A
Sbjct: 241 ALEAEQEMLRRRIATFGLADDPMDIWAELGVPRPDSVPMLEADAFTAMAQAHRITSPA 298


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.319    0.136    0.389 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 1,185,685
Number of extensions: 50535
Number of successful extensions: 227
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 227
Number of HSP's successfully gapped: 1
Length of query: 382
Length of database: 1,619,870
Length adjustment: 87
Effective length of query: 295
Effective length of database: 1,207,925
Effective search space: 356337875
Effective search space used: 356337875
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 131 (55.1 bits)