BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0021.0016.p
         (314 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300311990|ref|YP_003776082.1| malonyl CoA-[acyl-carrier-prote...   364   e-102
gi|300311248|ref|YP_003775340.1| malonyl CoA-[acyl-carrier-prote...    91   1e-19

>gi|300311990|ref|YP_003776082.1| malonyl CoA-[acyl-carrier-protein]
           transacylase [Herbaspirillum seropedicae SmR1]
          Length = 314

 Score =  364 bits (934), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 223/314 (71%), Positives = 255/314 (81%)

Query: 1   MSLRLAILCPGQGAQHAGMFDLLRDDPVASAFLRQSDLSSHLQAVVETVLNDPAQLYANR 60
           MS+RLAILCPGQGAQHAG+FDLLR+D  A+AFL Q  L+ +L A +  VL+ P  LYAN 
Sbjct: 1   MSMRLAILCPGQGAQHAGLFDLLREDEQAAAFLDQLPLTDYLDAPLAQVLSQPTHLYANG 60

Query: 61  NAQPLIVAAQLAAWQALQEPLAALAGAHLVVAGYSVGELAAYAVAGVLDPAETVALAARR 120
           NAQ LIVAAQLAAWQAL+EPLAA+AG  + VAGYSVGEL+AYAVA V+DP   VALAA+R
Sbjct: 61  NAQVLIVAAQLAAWQALREPLAAIAGPPVAVAGYSVGELSAYAVAEVIDPVAAVALAAQR 120

Query: 121 AAAMTEAASAQPEQGLMSIGGVALSVAQECLARHDGYVAIVTGEDTLIAGGAGTALQAAA 180
           AAAM  AA ++P QGLM++GG+ L+ AQ+CL RH  +VAIVTG+DTLIAGG+  AL+A A
Sbjct: 121 AAAMDAAARSRPGQGLMALGGIDLAAAQDCLLRHGAHVAIVTGDDTLIAGGSSPALEAVA 180

Query: 181 DELAAAGARTSSLPVGLASHTPLMQAATGAFAAELAALQPRSPGPALLAGVTGQAIADAA 240
            ELA  GART+ LPVGLASHTPLMQAA   FAA L  L   +P  ALLAGV+GQ IADA 
Sbjct: 181 AELAGRGARTTVLPVGLASHTPLMQAAVTPFAAALEGLSLHAPKTALLAGVSGQGIADAH 240

Query: 241 QAQALLVRQLVEPIQWAGCMDAMAERGVTVALELGPGAALSRMLRERHPQMACRSLADFR 300
           QA ALL+RQL EPIQWA CMDA  ERGVTVALELGPGAALSRMLRERHP ++CRSLADFR
Sbjct: 241 QACALLLRQLTEPIQWAACMDACVERGVTVALELGPGAALSRMLRERHPHLSCRSLADFR 300

Query: 301 SLSGALAWLRRQTD 314
           SLSG L+WLRRQ D
Sbjct: 301 SLSGLLSWLRRQAD 314


>gi|300311248|ref|YP_003775340.1| malonyl CoA-[acyl-carrier-protein]
           transacylase [Herbaspirillum seropedicae SmR1]
          Length = 310

 Score = 91.3 bits (225), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 95/315 (30%), Positives = 151/315 (47%), Gaps = 17/315 (5%)

Query: 5   LAILCPGQGAQHAGMFDLLRDDPVASAFLRQS--DLSSHLQAVVETVLND-PAQ-LYANR 60
            A + PGQG+Q  GM +   D+ V    +RQ+  + S  LQ  +  ++ + P + L    
Sbjct: 4   FAFVFPGQGSQAIGMLNGFADNDV----VRQTVAEASDALQFDLGKLIAEGPKEDLDLTT 59

Query: 61  NAQPLIVAAQLAAWQALQEPLAALAGAHLVVAGYSVGELAAYAVAGVLDPAETVALAARR 120
           N QP+++ A +A ++A    LAA   A  +VAG+S+GE +A   AGV+   + V L   R
Sbjct: 60  NTQPVMLTAAVAFYRAW---LAAGGKAPALVAGHSLGEYSALVAAGVIAFKDAVPLVRFR 116

Query: 121 AAAMTEAASAQPEQGLMSIGGVA-LSVAQECLARHDGYVAIVTGEDT---LIAGGAGTAL 176
           A AM EA     + G+ +I G++   V   C     G V      +    ++  G   A+
Sbjct: 117 AQAMQEAVPVG-QGGMAAILGLSDEDVRAACAEAAQGDVVEAVNFNAPAQVVIAGHKAAV 175

Query: 177 QAAADELAAAGA-RTSSLPVGLASHTPLMQAATGAFAAELAALQPRSPGPALLAGVTGQA 235
           + A D   A GA R   LPV    H+ L++ A+    A LA +   +P   L+  V    
Sbjct: 176 ERACDIAKAKGAKRALPLPVSAPFHSSLLKPASDRLQAYLANVAFSAPQIPLINNVDVAV 235

Query: 236 IADAAQAQALLVRQLVEPIQWAGCMDAMAERGVTVALELGPGAALSRMLRERHPQMACRS 295
           + D A  +  LVRQ   P++W   +  MA  GVT  +E GPG  L+ + +  +  +   +
Sbjct: 236 VNDPAAIKDALVRQAAAPVRWVETVQKMAAEGVTHLVECGPGKVLTGLTKRINGDLVGEA 295

Query: 296 LADFRSLSGALAWLR 310
           + D  SL+  L  L+
Sbjct: 296 IVDQESLNKVLESLK 310


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.318    0.129    0.365 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 747,911
Number of extensions: 22680
Number of successful extensions: 161
Number of sequences better than 1.0e-08: 2
Number of HSP's gapped: 159
Number of HSP's successfully gapped: 2
Length of query: 314
Length of database: 1,619,870
Length adjustment: 85
Effective length of query: 229
Effective length of database: 1,217,395
Effective search space: 278783455
Effective search space used: 278783455
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 130 (54.7 bits)