BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0019.0265.p (879 letters) Database: BlastDatabases/689/689 4735 sequences; 1,619,870 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|300310082|ref|YP_003774174.1| ClpA/B-type chaperone protein [... 778 0.0 gi|300313318|ref|YP_003777410.1| ClpA/B-type chaperone ATPase [H... 755 0.0 gi|300311426|ref|YP_003775518.1| ATP-dependent Clp protease subu... 543 e-155 gi|300310731|ref|YP_003774823.1| ATP-dependent protease ATP-bind... 273 6e-74 >gi|300310082|ref|YP_003774174.1| ClpA/B-type chaperone protein [Herbaspirillum seropedicae SmR1] Length = 893 Score = 778 bits (2008), Expect = 0.0, Method: Compositional matrix adjust. Identities = 433/888 (48%), Positives = 580/888 (65%), Gaps = 18/888 (2%) Query: 4 VELKPLVGRLNGYSKQALEDGVGLCVSRGHYEITVEHLLVKLLDDLQSDIVLMLRQHGVD 63 + LK L+ +LN S+ A E LC++RG YE+ +EHL + LL++ Q+D L++R+ G+ Sbjct: 3 INLKSLISKLNDSSRLATERAASLCMARGQYEVDLEHLFLALLENPQTDFSLIVRRSGIS 62 Query: 64 AALVRRALEKSIEDMRTGNAGRPAFSPLLLELLQDAWLIASVNLFESRIRSGAILLAFLA 123 ++ LE I + GN P S L L + WLIAS++ IRSG +LLA L Sbjct: 63 PDSLQADLEHEISQFKNGNTRTPVLSSHLQTLFEHGWLIASLDGERPSIRSGHLLLALLT 122 Query: 124 RATYYATGDYATPLRA-LNRETLLASFGQICSASIEETA-----------AAADAPGGGE 171 + + L A + L ++ S+E A AD GG+ Sbjct: 123 QTELAQLAYRGSKLFARFKVDELKHDLAKLTEGSVEAPALASASASAAADGQADEQQGGD 182 Query: 172 AAGA--PAGDGSAIARFCENFTDKARAGKIDPVFGRDMEIRQMVDILARRRKNNPICVGD 229 G G A+ ++ N T +AR GKIDPV GRD EIRQ VDIL RRR+NNPI G+ Sbjct: 183 PVGEMRAGGRTPALDQYTTNLTQRAREGKIDPVVGRDGEIRQAVDILLRRRQNNPILTGE 242 Query: 230 PGVGKTAVVEGLALRIVTGDVPDSLKEVTILGLDMGLLQAGASVKGEFENRLKGVITEIK 289 GVGKTAVVEGLALRI DVP +L+ V I LDMGLLQAGASVKGEFENRLKGVI E+K Sbjct: 243 AGVGKTAVVEGLALRIAQDDVPQALQGVEIHTLDMGLLQAGASVKGEFENRLKGVIDEVK 302 Query: 290 SSPKPIILFIDEAHTLIGAGGQAGTSDAANLLKPALARGELRTIAATTWAEYKKYFEKDA 349 SP PIILFIDEAHT+IGAGGQAG +DAANLLKPALARGELRTIAATTW+EYKKYFEKDA Sbjct: 303 KSPHPIILFIDEAHTMIGAGGQAGQNDAANLLKPALARGELRTIAATTWSEYKKYFEKDA 362 Query: 350 ALARRFQLVKLDEPDLATAVLILRGLKEKYEDVHHVVMRDDAIIAAAELSSRYITGRQLP 409 ALARRFQ++K++EP A +LR + E V + D+AI A LS RYI+GRQLP Sbjct: 363 ALARRFQVIKVEEPTEEVACAMLRAMAPLMEKHFGVRVYDEAITEAVRLSHRYISGRQLP 422 Query: 410 DKAVDLLDTACARVKVLQSAKPDVLEDKERLIQALQREKGGLERDRDNLQPVDLARLDDI 469 DKA+ +LDTACA+V + Q+A P LE R ++ L E LER+ + RL ++ Sbjct: 423 DKAISVLDTACAKVALGQNATPARLEGVTRRLERLAAEIAALERETRS-GASHATRLGEL 481 Query: 470 DGLLATAEEQAEALRQVWQGQKAAADALLAARAARKKARDEGASEEELARLVQEIEAASD 529 A A + L+Q W+ ++ + AARAA ++A E AS ++ A E++ Sbjct: 482 QAQHAQAIAEQTELQQRWEQERELNGRIQAARAALEEANQESASSQDSAAARSELQQLLA 541 Query: 530 AFKTAQGKEPLVRVDVDPDVVAKVISDWTGIPVGKMLRDQAATVMHMARTLSERVRGQDH 589 K QG+ P+V V VD VVA++++ WTGIP+GKM++D+ TV+ + L ERV GQ Sbjct: 542 QLKEHQGETPMVPVQVDGHVVAEIVAGWTGIPLGKMVKDEIKTVLGLDALLKERVLGQPQ 601 Query: 590 AMHQIGEILKTAQSGLRDPQQPLGVFLLAGPSGVGKTETALSVADILFGDEKSTVIINMS 649 A + + ++T+++ L DP +P GVFL GPSGVGKTETAL++AD+L+G E+ + INMS Sbjct: 602 ATAAVAQRVRTSRANLDDPGKPKGVFLFVGPSGVGKTETALALADVLYGGERKLITINMS 661 Query: 650 EFQEKHNVSRLIGSPPGYVGYGEGGVLTEAVRQRPYSVVLLDEVEKAHLDVMNLFYQVFD 709 E+QE H VS L GSPPGYVGYGEGGVLTEAVR+ PYSVVLLDEVEKAH DV+ LF+QVFD Sbjct: 662 EYQEAHTVSGLKGSPPGYVGYGEGGVLTEAVRRNPYSVVLLDEVEKAHPDVLELFFQVFD 721 Query: 710 KGMLSDGEGKEIDFSNTVIFLTSNLATDVITEMT---AGDDRPDHDTLLSAVRPILSAHF 766 KG++ DGEG+EIDF NT+I LTSN+A+ + + + + P D L +RP L F Sbjct: 722 KGVMDDGEGREIDFKNTIIILTSNVASSQLMQACLNKSAAELPTPDELDVLIRPQLVKAF 781 Query: 767 KPALLARMTVIPYFTLARDALAGIVRLKMNKIVSRLLHNNKMKFTYTDAVVEQIASRCTE 826 KPA L R+ VIPY+ ++ + L I++LK+ +I +R+ N+K +F+Y A+VE + +RCTE Sbjct: 782 KPAFLGRLKVIPYYPISDEVLEQIIKLKLGRIANRIAENHKAEFSYDKALVEAVLARCTE 841 Query: 827 VETGARNIDFILRGTVMPLMSQEILSRMSGEVQPAAITLDVAEDGTFK 874 V++GARN+D IL G+++P +++ +L+RM+ + I + + G FK Sbjct: 842 VDSGARNVDNILNGSLLPEIAESVLARMAEGQGISRIKVSAGKKGDFK 889 >gi|300313318|ref|YP_003777410.1| ClpA/B-type chaperone ATPase [Herbaspirillum seropedicae SmR1] Length = 889 Score = 755 bits (1949), Expect = 0.0, Method: Compositional matrix adjust. Identities = 424/886 (47%), Positives = 573/886 (64%), Gaps = 18/886 (2%) Query: 4 VELKPLVGRLNGYSKQALEDGVGLCVSRGHYEITVEHLLVKLLDDLQSDIVLMLRQHGVD 63 + L+ L+ +LN ++ A E LCVS HYE+ +EHL + LL+ QSD L+ R+ G+D Sbjct: 3 INLRSLICKLNETARLATERAATLCVSCSHYEVDLEHLFLALLEQPQSDFSLIARRSGID 62 Query: 64 AALVRRALEKSIEDMRTGNAGRPAFSPLLLELLQDAWLIASVNLFESRIRSGAILLAFLA 123 ++ LE I R GNA P SP L L ++ WLIAS+ +RS +LLA L Sbjct: 63 TDGLQADLEHEISTFREGNARTPVLSPHLRTLFENGWLIASLEESNPSVRSAHLLLALLT 122 Query: 124 RA-----TYYATGDYAT-PLRALNRETLLASFGQICSASIEETAAAADAPGGGEAAGA-- 175 ++ Y + +A + + + G + SA+I +T D GG+ G Sbjct: 123 QSDLSQLAYRGSKLFAKFKIDEIKHNLHRLTEGSVESAAIGKTGQGGDRESGGDPMGELK 182 Query: 176 --PAGDGSAIARFCENFTDKARAGKIDPVFGRDMEIRQMVDILARRRKNNPICVGDPGVG 233 G +A+ ++ T +AR GKIDPV GRD EIRQ VDIL RRR+NNPI G+ GVG Sbjct: 183 QLRIGKMTALDQYTTQLTQRARDGKIDPVIGRDAEIRQAVDILLRRRQNNPILTGEAGVG 242 Query: 234 KTAVVEGLALRIVTGDVPDSLKEVTILGLDMGLLQAGASVKGEFENRLKGVITEIKSSPK 293 KTAVVEGLALRI GDVP L+ V I LDMGLLQAGASVKGEFE+RLK VI E+K S Sbjct: 243 KTAVVEGLALRIAQGDVPKPLQGVEIHTLDMGLLQAGASVKGEFESRLKTVIDEVKKSAY 302 Query: 294 PIILFIDEAHTLIGAGGQAGTSDAANLLKPALARGELRTIAATTWAEYKKYFEKDAALAR 353 PIILFIDEAHT+IGA GQAG SDAANLLKPALARGELRTIAATTW+EYKKYFEKDAALAR Sbjct: 303 PIILFIDEAHTMIGAAGQAGQSDAANLLKPALARGELRTIAATTWSEYKKYFEKDAALAR 362 Query: 354 RFQLVKLDEPDLATAVLILRGLKEKYEDVHHVVMRDDAIIAAAELSSRYITGRQLPDKAV 413 RFQ++K++EP A +LR + E V + D+A++ A LS RYI+GRQLPDKA+ Sbjct: 363 RFQVIKVEEPGEDVACAMLRAMVPLMEQHFGVRVYDEAVVEAVRLSHRYISGRQLPDKAI 422 Query: 414 DLLDTACARVKVLQSAKPDVLEDKERLIQALQREKGGLERD--RDNLQPVDLARLDDIDG 471 +LDTACA+V + + A P +LE R ++ L E L R+ + LA L D Sbjct: 423 SVLDTACAKVALGRDATPALLEGVTRRLERLDTEISALRREAASGSQHEERLASLLD-QH 481 Query: 472 LLATAEEQAEALRQVWQGQKAAADALLAARAARKKARDEGASEEELARLVQEIEAASDAF 531 + A AE LR W+ ++ + + ARA + A + E++ D Sbjct: 482 VCAVAERHDLQLR--WEQERELNERIQQARATLENPGTGDARGGNVDAARAELKQLLDEL 539 Query: 532 KTAQGKEPLVRVDVDPDVVAKVISDWTGIPVGKMLRDQAATVMHMARTLSERVRGQDHAM 591 + QG P+V + VD VVA++++ WTGIP+GKM++D+ TV+ + L ERV GQ A Sbjct: 540 RQRQGDAPMVPIQVDGHVVAEIVAAWTGIPLGKMVKDEIQTVLDLDALLQERVLGQPQAT 599 Query: 592 HQIGEILKTAQSGLRDPQQPLGVFLLAGPSGVGKTETALSVADILFGDEKSTVIINMSEF 651 + + ++T+++ L DP +P GVFL GPSGVGKTETAL++AD+L+G E+ + INMSE+ Sbjct: 600 SAVAQRVRTSRANLDDPGKPKGVFLFVGPSGVGKTETALALADVLYGGERKLITINMSEY 659 Query: 652 QEKHNVSRLIGSPPGYVGYGEGGVLTEAVRQRPYSVVLLDEVEKAHLDVMNLFYQVFDKG 711 QE H VS L GSPPGYVGYGEGGVLTEAVR+ PYSVVLLDEVEKAH DV+ LF+QVFDKG Sbjct: 660 QEAHTVSGLKGSPPGYVGYGEGGVLTEAVRRNPYSVVLLDEVEKAHADVLELFFQVFDKG 719 Query: 712 MLSDGEGKEIDFSNTVIFLTSNLATDVITEMT---AGDDRPDHDTLLSAVRPILSAHFKP 768 ++ D EG+EIDF NT+I LTSN+A+ + + + ++ P + L + +RP L FKP Sbjct: 720 VMDDAEGREIDFKNTIIILTSNVASAQMMQACLNKSQEELPTPEELDTLIRPQLIKTFKP 779 Query: 769 ALLARMTVIPYFTLARDALAGIVRLKMNKIVSRLLHNNKMKFTYTDAVVEQIASRCTEVE 828 A L R+ V+PY+ +A L I++LK+ +I R+ N++++F+Y A+VE + RCTEV+ Sbjct: 780 AFLGRLKVVPYYPIADVVLVEIIKLKLARIAKRVAENHRVEFSYDKALVEAVLGRCTEVD 839 Query: 829 TGARNIDFILRGTVMPLMSQEILSRMSGEVQPAAITLDVAEDGTFK 874 +GARN+D IL GT++P +++ +L RM+ V+ I + ++ G FK Sbjct: 840 SGARNVDNILSGTLLPAVAESVLVRMAEGVEIRRIKVSASKKGDFK 885 >gi|300311426|ref|YP_003775518.1| ATP-dependent Clp protease subunit [Herbaspirillum seropedicae SmR1] Length = 861 Score = 543 bits (1399), Expect = e-155, Method: Compositional matrix adjust. Identities = 326/860 (37%), Positives = 499/860 (58%), Gaps = 44/860 (5%) Query: 12 RLNGYSKQALEDGVGLCVSRGHYEITVEHLLVKLLDDLQSDIVLMLRQHGVDAALVRRAL 71 +L ++AL D V + I HL++ LL+ +L++ GV+ + AL Sbjct: 5 KLTTKLQEALADAQSQAVGHDNQYIEPVHLILALLNQEDGGARSLLQRAGVNVNGLSAAL 64 Query: 72 EKSIEDMR--TGNAGRPAFSPLLLELLQDAWLIASVNLFESRIRSGAILLAFLARATYYA 129 + +++ + +GN G L+ LL A A + + + S +LL + + Sbjct: 65 QAAVKRLPQVSGNGGEVQVGRELVALLNLADKEAQKH-GDQFVASEMVLLGLVDDKS--- 120 Query: 130 TGDYATPLRALNRETLLASFGQICSASIEETAAAADAPGGGEAAGAPAGDGSAIARFCEN 189 A L R++L E A A G ++ G A+ ++ + Sbjct: 121 DAGRAARENGLTRKSL-------------EAAITAVRGGASVSSQQDEGQREALKKYTLD 167 Query: 190 FTDKARAGKIDPVFGRDMEIRQMVDILARRRKNNPICVGDPGVGKTAVVEGLALRIVTGD 249 T++ARAGK+DPV GRD EIR+ + +L RR KNNP+ +G+PGVGKTA+VEGLA RIV G+ Sbjct: 168 LTERARAGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLAQRIVNGE 227 Query: 250 VPDSLKEVTILGLDMGLLQAGASVKGEFENRLKGVITEIKSSPKPIILFIDEAHTLIGAG 309 VPDSLK +L LDM L AGA +GEFE RLK V+ EI I+FIDE HT++GAG Sbjct: 228 VPDSLKSKRVLSLDMAALLAGAKYRGEFEERLKAVLKEIAQDEGQTIVFIDELHTMVGAG 287 Query: 310 GQAGTSDAANLLKPALARGELRTIAATTWAEYKKYFEKDAALARRFQLVKLDEPDLATAV 369 G DA N+LKPALARGEL + ATT EY++Y EKDAAL RRFQ + +DEP + + Sbjct: 288 KAEGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKILVDEPSVEATI 347 Query: 370 LILRGLKEKYEDVHHVVMRDDAIIAAAELSSRYITGRQLPDKAVDLLDTACARVKVLQSA 429 ILRGL+EKYE H V + D AI+AAAELS RYIT R LPDKA+DL+D A +++K+ + Sbjct: 348 AILRGLQEKYEVHHGVDITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAASKIKIEIDS 407 Query: 430 KPDVLEDKERLIQALQREKGGLERDRDNLQPVDLARLDDIDGLLATAEEQAEALRQVWQG 489 KP+V++ +R + L+ E+ ++R++D RL I+ + E + L ++W+ Sbjct: 408 KPEVMDKLDRRLIQLKIEREAVKREKDE---ASQKRLQLIEEEIEKLEREYADLEEIWKA 464 Query: 490 QKAAADA-----------LLAARAARKKARDEGASEEELARLVQ-----EIEAASDAFKT 533 +K++A L A +K+ + SE + +L + E++ DA Sbjct: 465 EKSSAQGGQQLKEEIEKVRLQMEEATRKSDWQKVSELKYGKLAELEAALEVQNKKDAAGV 524 Query: 534 AQGKEPLVRVDVDPDVVAKVISDWTGIPVGKMLRDQAATVMHMARTLSERVRGQDHAMHQ 593 K LVR V + +A++++ TGIPV +M++ + ++HM L ERV GQD A+ Sbjct: 525 KTEKPKLVRTQVGAEEIAEIVARATGIPVSRMMQGEREKLLHMEDVLHERVVGQDEAIVA 584 Query: 594 IGEILKTAQSGLRDPQQPLGVFLLAGPSGVGKTETALSVADILFGDEKSTVIINMSEFQE 653 + + ++ +++GL DP +P G F+ GP+GVGKTE ++A LF E++ + I+MSEF E Sbjct: 585 VSDAIRRSRAGLGDPSKPYGSFMFLGPTGVGKTELCKALASYLFDTEEAMIRIDMSEFME 644 Query: 654 KHNVSRLIGSPPGYVGYGEGGVLTEAVRQRPYSVVLLDEVEKAHLDVMNLFYQVFDKGML 713 KH+V+RLIG+PPGYVGY EGG LTEAVR++PYSV+LLDE+EKAH DV N+ QV D G + Sbjct: 645 KHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEIEKAHPDVFNVLLQVLDDGRM 704 Query: 714 SDGEGKEIDFSNTVIFLTSNLATDVITEMTAGDDRPDHDTLLSAVRPILSAHFKPALLAR 773 +DG+G+ +DF NTVI +TSNL + I M D +++ VR HF+P + R Sbjct: 705 TDGQGRTVDFKNTVIVMTSNLGSHKIQSMEDSDPALVKLAVMAEVR----THFRPEFINR 760 Query: 774 M-TVIPYFTLARDALAGIVRLKMNKIVSRLLHNNKMKFTYTDAVVEQIASRCTEVETGAR 832 + ++ + L + I ++++ +I+ + L ++ ++A +++IA + GAR Sbjct: 761 VDEIVVFHALDAKNIGAIAKIQL-RILEQRLAKLEIGLEISEAGLQKIAEAGFDPVYGAR 819 Query: 833 NIDFILRGTVMPLMSQEILS 852 + ++ + +S++IL+ Sbjct: 820 PLKRAIQQEIENPLSKQILA 839 >gi|300310731|ref|YP_003774823.1| ATP-dependent protease ATP-binding specificity subunit [Herbaspirillum seropedicae SmR1] Length = 767 Score = 273 bits (697), Expect = 6e-74, Method: Compositional matrix adjust. Identities = 209/597 (35%), Positives = 301/597 (50%), Gaps = 77/597 (12%) Query: 33 HYEITVEHLLVKLLDDLQSDIVLMLRQHGVDAALVRRALEKSIEDMRTGNAG------RP 86 H ITVEHLL+ LLD+ + VL R V+ +R+ L I D G +P Sbjct: 22 HEFITVEHLLLALLDNPSAAEVL--RACSVNIDDLRKTLTNFITDNTPTVPGTNEVDTQP 79 Query: 87 AFSPLLLELLQDAWL-IASVNLFESRIRSGAILLAFL----ARATYYATGDYATPLRALN 141 ++Q A + + S + + + +L+A + A YY T L +N Sbjct: 80 TLG--FQRVIQRAIMHVQSASNGKKEVTGANVLVAIFGEKDSHAVYYLHQQGVTRLDVVN 137 Query: 142 RETLLASFGQICSASIEETAAAADAPGGGEAAGAPAGDG-SAIARFCENFTDKARAGKID 200 S G ++ A AP G E A S + +F +N A GKID Sbjct: 138 ----FISHG----VRKDQQADPQKAPEGAEDVQAEGQQKESPLDQFTQNLNKAAAEGKID 189 Query: 201 PVFGRDMEIRQMVDILARRRKNNPICVGDPGVGKTAVVEGLALRIVTGDVPDSLKEVTIL 260 P+ GR+ E+ +++ L RRRKNNP+ VG+ GVGKTA+ EGLA R+ GDVP+ LK + Sbjct: 190 PLIGRESEVERVIQTLCRRRKNNPLLVGEAGVGKTAIAEGLAWRVTQGDVPEILKNAVVY 249 Query: 261 GLDMGLLQAGASVKGEFENRLKGVITEIKSSPKPIILFIDEAHTLIGAG-GQAGTSDAAN 319 LDMG L AG +G+FE RLK V+ ++K SP ILFIDE HT+IGAG GT DA+N Sbjct: 250 SLDMGALLAGTKYRGDFEQRLKAVLKQLKDSPNG-ILFIDEIHTIIGAGSASGGTLDASN 308 Query: 320 LLKPALARGELRTIAATTWAEYKKYFEKDAALARRFQLVKLDEPDLATAVLILRGLKEKY 379 LLKPAL+ G+L+ I ATT+ E++ FEKD AL+RRFQ + ++EP + V ILRGLK K+ Sbjct: 309 LLKPALSSGQLKCIGATTYTEFRGVFEKDHALSRRFQKIDVNEPTVEQTVQILRGLKSKF 368 Query: 380 EDVHHVVMRDDAIIAAAELSSRYITGRQLPDKAVDLLDTACARVKVLQSA-------KPD 432 E+ H V A+ +AAEL++R+I R LPDKA+D++D A A ++L + KP+ Sbjct: 369 EEHHGVKYSASALTSAAELAARFINDRHLPDKAIDVIDEAGAAQRILPKSKQKKTIGKPE 428 Query: 433 VLEDKERLIQALQR--EKGGLERDRDNLQPVDLARLDDIDGLLATAEEQAEALRQVWQGQ 490 + E +I + R + + DR LQ +D L+ V GQ Sbjct: 429 I----EEIISKIARIPPQSVNQDDRAKLQTID------------------RDLKNVVFGQ 466 Query: 491 KAAADALLAA-RAARKKARDEGASEEELARLVQEIEAASDAFKTAQGKE-------PLVR 542 A +AL +A + AR G +++ + + + KT K+ LVR Sbjct: 467 DPAIEALSSAIKMARAGL---GKTDKPIGSFL--FSGPTGVGKTEVAKQLAFILGIELVR 521 Query: 543 VDVDPDVVAKVISDWTGIPVGKMLRDQAATVMHMARTLSERVRGQDHAMHQIGEILK 599 D+ + +S G P G + DQ L+E V + HA+ + EI K Sbjct: 522 FDMSEYMERHAVSRLIGAPPGYVGFDQGG-------LLTEAVNKKPHAVLLLDEIEK 571 Score = 183 bits (465), Expect = 4e-47, Method: Compositional matrix adjust. Identities = 126/424 (29%), Positives = 229/424 (54%), Gaps = 27/424 (6%) Query: 465 RLDDIDGLLATAEEQAEALR------QVWQGQKAAADALLAARAARKKARDEGASEEELA 518 R ID T E+ + LR + G K +A AL +A + ++ ++ Sbjct: 343 RFQKIDVNEPTVEQTVQILRGLKSKFEEHHGVKYSASALTSAAELAARFINDRHLPDKAI 402 Query: 519 RLVQEIEAASDAFKTAQGKEPLVRVDVDPDVVAKVISDWTGIPVGKMLRDQAATVMHMAR 578 ++ E AA ++ K+ + + +++ ++IS IP + +D A + + R Sbjct: 403 DVIDEAGAAQRILPKSKQKKTIGKPEIE-----EIISKIARIPPQSVNQDDRAKLQTIDR 457 Query: 579 TLSERVRGQDHAMHQIGEILKTAQSGLRDPQQPLGVFLLAGPSGVGKTETALSVADILFG 638 L V GQD A+ + +K A++GL +P+G FL +GP+GVGKTE A +A IL G Sbjct: 458 DLKNVVFGQDPAIEALSSAIKMARAGLGKTDKPIGSFLFSGPTGVGKTEVAKQLAFIL-G 516 Query: 639 DEKSTVIINMSEFQEKHNVSRLIGSPPGYVGYGEGGVLTEAVRQRPYSVVLLDEVEKAHL 698 E V +MSE+ E+H VSRLIG+PPGYVG+ +GG+LTEAV ++P++V+LLDE+EKAH Sbjct: 517 IE--LVRFDMSEYMERHAVSRLIGAPPGYVGFDQGGLLTEAVNKKPHAVLLLDEIEKAHP 574 Query: 699 DVMNLFYQVFDKGMLSDGEGKEIDFSNTVIFLTSNLATDVITEMTAG-DDRPDHDTLLSA 757 D+ N+ QV D G L+D G++ DF N +I +T+N + + + T G ++ + ++ Sbjct: 575 DIFNILLQVMDHGTLTDNNGRKTDFRNVIIIMTTNAGAESLQKRTIGFTEKKEAGDEMAD 634 Query: 758 VRPILSAHFKPALLARMTVIPYFTLARDALAGIVRLKMNKIVSRL---LHNNKMKFTYTD 814 ++ + + F+ L A +I + L + + +V +K + +L LH K++ ++D Sbjct: 635 IKRMFTPEFRNRLDA---IISFRPLDEEIILRVV----DKFLMQLEEQLHEKKVEAVFSD 687 Query: 815 AVVEQIASRCTEVETGARNIDFILRGTVMPLMSQEILSRMSGEVQPAAITLDVAEDGTFK 874 ++ + + + + GAR + +++ + ++ E+L V +T+++ + K Sbjct: 688 SLRKFLGKKGFDPLMGARPMSRLIQDLIRKALADELL--FGKLVSGGRVTVEMDDKDQIK 745 Query: 875 VDFP 878 ++FP Sbjct: 746 LEFP 749 Database: BlastDatabases/689/689 Posted date: Apr 10, 2011 12:15 AM Number of letters in database: 1,619,870 Number of sequences in database: 4735 Lambda K H 0.318 0.135 0.378 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 4735 Number of Hits to DB: 2,355,676 Number of extensions: 92222 Number of successful extensions: 386 Number of sequences better than 1.0e-08: 4 Number of HSP's gapped: 374 Number of HSP's successfully gapped: 5 Length of query: 879 Length of database: 1,619,870 Length adjustment: 94 Effective length of query: 785 Effective length of database: 1,174,780 Effective search space: 922202300 Effective search space used: 922202300 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 135 (56.6 bits)