BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0019.0097.p
         (237 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300311854|ref|YP_003775946.1| type 2 phosphatidic acid phosph...   361   e-101

>gi|300311854|ref|YP_003775946.1| type 2 phosphatidic acid
           phosphatase family protein [Herbaspirillum seropedicae
           SmR1]
          Length = 257

 Score =  361 bits (927), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 192/235 (81%), Positives = 210/235 (89%)

Query: 1   MARDHHLGLPLTTGLMAALATVMLFALIAYEVSSKGALTRLDQQLADWFNQHAFSPLTEL 60
           +ARDHHLGLPL+TGL+A LAT +LFALIAYEV + GALTRLDQQLADWFNQ AFSPLTEL
Sbjct: 23  LARDHHLGLPLSTGLLAVLATALLFALIAYEVHTHGALTRLDQQLADWFNQRAFSPLTEL 82

Query: 61  VLGYTHLHGTIGVLVMGALLLWHMVRKQRWAWVTDLLLVLPGGMLCNFTLKHIFARLRPS 120
           VLGYTHLHGTIGVLVMG LLL HMVR ++W WV DLLLVLPGGML N+ LKH+FARLRPS
Sbjct: 83  VLGYTHLHGTIGVLVMGGLLLRHMVRARQWPWVIDLLLVLPGGMLLNYLLKHLFARLRPS 142

Query: 121 FDDPILVLHSYSFPSGHTIGATLLYAMLAAYLLNQPGVTAAIGARLKTGERGVQAAVIGA 180
           F+DP+LVLHSYSFPSGHTIGATLLY MLAAY+LNQP ++ A+  RL   +RGVQ AVIGA
Sbjct: 143 FEDPLLVLHSYSFPSGHTIGATLLYTMLAAYVLNQPALSEALSRRLGGSQRGVQLAVIGA 202

Query: 181 ALLLVALTAFSRVYLGAHFLSDVVGAMLLGTAWFALWTTVVFTWQRHYYAQPRSN 235
           ALL+VALTAFSRVYLGAHFLSDV+GAMLLGTAWFALWTTVVFT QRHYY   RSN
Sbjct: 203 ALLMVALTAFSRVYLGAHFLSDVLGAMLLGTAWFALWTTVVFTLQRHYYGGTRSN 257


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.328    0.139    0.441 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 715,969
Number of extensions: 26903
Number of successful extensions: 152
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 152
Number of HSP's successfully gapped: 1
Length of query: 237
Length of database: 1,619,870
Length adjustment: 82
Effective length of query: 155
Effective length of database: 1,231,600
Effective search space: 190898000
Effective search space used: 190898000
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 129 (54.3 bits)