BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0019.0048.p
         (982 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300311814|ref|YP_003775906.1| malto-oligosyl trehalose syntha...  1471   0.0  

>gi|300311814|ref|YP_003775906.1| malto-oligosyl trehalose synthase
           [Herbaspirillum seropedicae SmR1]
          Length = 987

 Score = 1471 bits (3809), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 760/996 (76%), Positives = 838/996 (84%), Gaps = 28/996 (2%)

Query: 2   PAPSVSPDPAAHSS-IPRATARLQLHRDFRFEQAAATVDYYHRLGISHFYLSPILVARPG 60
           P   ++  P +H++ + RATARLQLHRDF F QAA  VDYY RLG+SH Y+SPIL ARPG
Sbjct: 5   PDSELAAPPVSHAAPLIRATARLQLHRDFNFAQAAEVVDYYQRLGVSHLYVSPILTARPG 64

Query: 61  STHGYDVVDATRINPELGGEAGLRQLHQRLHAQGMGIVVDIVPNHMAVGHHNAWWQDVLR 120
           STHGYDV DA+RINPELGGE+GLRQL QRL A GMG++VDIVPNHMAVG HN WWQDVLR
Sbjct: 65  STHGYDVADASRINPELGGESGLRQLVQRLRAAGMGLLVDIVPNHMAVGRHNPWWQDVLR 124

Query: 121 WGRHSRHAEWFDIHWDSPDPALSGKVLLPFLGQPYAEALEAGELVLRFDADHGELQIAHH 180
           WGR S HA WFDI WDS DPAL GKVLLPFLGQPYAEALEAGELVL  DA+ GEL + H+
Sbjct: 125 WGRESPHALWFDIDWDSADPALKGKVLLPFLGQPYAEALEAGELVLCLDAESGELYVEHY 184

Query: 181 DNVFPLTPTDYAAVLETAGSPRLKDVIAAFAAIDPAQEGKDGRADSARAQLRAXRTQLRA 240
           ++ FPL   D+A VLETAGS RL +VIAAF    P                 A    LR 
Sbjct: 185 EHRFPLAAPDHALVLETAGSQRLAEVIAAFRKAMPQT-------------CSAAYGLLRD 231

Query: 241 LAADPEALADIDAALAAFSASQPHGRSAMHQLLERQHYRLAYWRNAADEINWRRFFEVSE 300
           LA DPEALADIDAALA FSA+QPHGRSA+HQLLERQHYRLA WRNAADEINWRRFFEVSE
Sbjct: 232 LARDPEALADIDAALAGFSAAQPHGRSALHQLLERQHYRLACWRNAADEINWRRFFEVSE 291

Query: 301 LVGMRVEREDVFEAMHAEIFRLYAEGIIDGLRLDHIDGLTDPATYCLRLRERLRTLRPGH 360
           LVGMRVEREDVFEAMHAE+FRLYAEG+IDGLRLDHIDGLTDPA YCLRLR+RLR+LRPGH
Sbjct: 292 LVGMRVEREDVFEAMHAELFRLYAEGLIDGLRLDHIDGLTDPAAYCLRLRQRLRSLRPGH 351

Query: 361 EPYLIAEKILAGDEALPPGWQLDGTTGYEFMDQCAAVLHDGEGEPVLDELWRDIVGELPV 420
           EPY++AEKILAGDEALP  WQLDG+TGY+FM+QCAAVLHDG+GEPVLD+LWRDIV EL  
Sbjct: 352 EPYIVAEKILAGDEALPAAWQLDGSTGYDFMEQCAAVLHDGDGEPVLDDLWRDIVAELGS 411

Query: 421 TADQ--LQSHGPGELCHFPTIVQEARRSFLVRNFAAEFNALTLCLHQLARSATQTRDLTL 478
           ++ Q  +Q HGP ELCHFP++VQ+ARRSFL RNFAAEFN LT CLHQLARSA  TRDL+L
Sbjct: 412 SSSQDCMQVHGPAELCHFPSMVQQARRSFLTRNFAAEFNVLTHCLHQLARSAVTTRDLSL 471

Query: 479 MSIRRAVAELLVHFPVYRTYANEQGMPGGERELLAATVQKAESTLHAADHAXQAGVIDHG 538
           MS+RR VAELLVHFPVYRTYA E+GMP  ERELLA T Q A + LH +DH     V    
Sbjct: 472 MSVRRCVAELLVHFPVYRTYATEEGMPALERELLARTAQLAAARLHPSDHPTLHVVEGWL 531

Query: 539 GH----------RRALQLRAIARFQQLTPPLTAKSMEDTAFYRFGRLLSRNEVGAEPAHL 588
           G           RRALQLRAIARFQQLTPPLTAKSMEDTAFYR+GRLLSRNEVGAEPA L
Sbjct: 532 GGDLMLPVGQEPRRALQLRAIARFQQLTPPLTAKSMEDTAFYRYGRLLSRNEVGAEPAQL 591

Query: 589 SLSVSHFHRLAARRAEQTPGSLLATGTHDHKRGEDARMRLAALSEIAEEWSTVLRHWHQL 648
           +LS++HFH+LAARRA QTP SLLATGTHDHKRGEDARMRLAALSEI EEW+TV+RHW  L
Sbjct: 592 ALSIAHFHQLAARRAAQTPASLLATGTHDHKRGEDARMRLAALSEIPEEWATVVRHWRTL 651

Query: 649 NAPIVAATAGQQGGIDAVDECMLYQTLVGAWPDGMRAGDDDLSALGELAERVIAWQRKAL 708
           NAPIVAATAG +GGIDA DE MLYQ+LVG WPDGMRAGDDDLSAL ELA RVIAWQRKAL
Sbjct: 652 NAPIVAATAGAEGGIDAADEYMLYQSLVGVWPDGMRAGDDDLSALEELAARVIAWQRKAL 711

Query: 709 REAKRRSDWVVPQTDYEAACERFTRALLCDPGLDPRHHPFLTELEDFVRRLAPLGTVNSL 768
           REAKRRSDW+ PQ  YEAACERFTRALLCDPGLD RHHPFLT LE+FVRRLAPLG +NSL
Sbjct: 712 REAKRRSDWIAPQASYEAACERFTRALLCDPGLDARHHPFLTGLEEFVRRLAPLGAINSL 771

Query: 769 SQTMLKLTSPGVPDFYQGSELWDLSMVDPDNRRPVDFALRERRLADAVSRPVSLRDWQSG 828
           SQTMLKLT PGVPDFYQGSELWDLSMVDPDNRRPVDF +R+RRLADA+SRPVSLR WQSG
Sbjct: 772 SQTMLKLTVPGVPDFYQGSELWDLSMVDPDNRRPVDFDMRQRRLADAMSRPVSLRQWQSG 831

Query: 829 SAKQQLIHAVLQYRRDHALLFAQGAYVPLTTHGKLARHVIAFARLLPVQEGGE-HALEAT 887
            AKQQLIHAVLQ+RR HA L+AQG Y+PL+THGKLARHVIAFARLLP  +G +    +AT
Sbjct: 832 GAKQQLIHAVLQHRRAHAQLYAQGQYLPLSTHGKLARHVIAFARLLPAPDGAQGQGWQAT 891

Query: 888 LVICTRLAGHLLSFEGRREEALPLVSAESWGDTRIAIPQVLSHAGG-GMRRWRSVLTSGQ 946
           +V+CTRLA HLL+F+G R+EALPLVSAE WGDTRI +P  LSHA G G+R+WRSVLTSG 
Sbjct: 892 VVVCTRLAAHLLAFDGARDEALPLVSAEVWGDTRIVLPAQLSHAQGEGLRQWRSVLTSGA 951

Query: 947 GEMEECAMPDGERGGSIAVAEILGSLPVELLALRVN 982
           G +EECAMPDGERGGS+ V+EILGSLPVELL LR++
Sbjct: 952 GPLEECAMPDGERGGSMTVSEILGSLPVELLELRLS 987


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.321    0.136    0.415 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 3,353,420
Number of extensions: 152265
Number of successful extensions: 598
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 594
Number of HSP's successfully gapped: 1
Length of query: 982
Length of database: 1,619,870
Length adjustment: 95
Effective length of query: 887
Effective length of database: 1,170,045
Effective search space: 1037829915
Effective search space used: 1037829915
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 135 (56.6 bits)