BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0018.0018.p
         (319 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300309605|ref|YP_003773697.1| phosphate acetyltransferase [He...   519   e-148
gi|300311722|ref|YP_003775814.1| phosphate acetyl/butaryl transf...   328   3e-91

>gi|300309605|ref|YP_003773697.1| phosphate acetyltransferase
           [Herbaspirillum seropedicae SmR1]
          Length = 319

 Score =  519 bits (1337), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 275/319 (86%), Positives = 290/319 (90%)

Query: 1   MFPPTQATPAERYGQLIRDALGAQAMRVAVVHPCSAEALQGALEAREEGLLEPLLVGPEA 60
           M    QATPAERY QLIRDALGAQAMRVAVVHPCS EALQGALEAR+EGL +P+LVGPE 
Sbjct: 1   MLQSVQATPAERYDQLIRDALGAQAMRVAVVHPCSPEALQGALEARDEGLFDPVLVGPET 60

Query: 61  RIRRVAEEAGLSLAGLQIESTEHSHAAAARAVELAVQGQVSALMKGSLHSDELLGAVVAS 120
           RIRR+AE A +SL GL I   EHSHAAAARAVE+AV G+V ALMKGSLHSDELLGAVV  
Sbjct: 61  RIRRIAEAADISLQGLPIVPAEHSHAAAARAVEMAVAGEVGALMKGSLHSDELLGAVVGG 120

Query: 121 GSGLRTERRISHVYAMAIPTYAKPLIITDAAINIAPTLAHKRDICQNAIDLLHVMGVPRP 180
            SGLRTERRISHVYAMAIP Y KPLIITDAAINIAPTLAHKRDICQNAIDLLHVMGVPRP
Sbjct: 121 ASGLRTERRISHVYAMAIPAYPKPLIITDAAINIAPTLAHKRDICQNAIDLLHVMGVPRP 180

Query: 181 HVAVLAAVETVNPAMPSTLDAAALTVMATRHQITGALVDGPLAFDNAISLQSASIKQITS 240
           HVAVLAAVETVNPAMPSTLDAAALTVMATRHQITGALVDGPLAFDNAISLQ+AS+K I S
Sbjct: 181 HVAVLAAVETVNPAMPSTLDAAALTVMATRHQITGALVDGPLAFDNAISLQAASVKGIVS 240

Query: 241 PVAGSADILLVPDLEAGNMLAKQLIYLSQAEAAGLVLGARVPVILTSRADSLRVRLASSA 300
           PVAGSADILLVPDLEAGNMLAKQLIYLSQA+AAGLVLGARVP+ILTSRADSLRVRLASSA
Sbjct: 241 PVAGSADILLVPDLEAGNMLAKQLIYLSQADAAGLVLGARVPIILTSRADSLRVRLASSA 300

Query: 301 LARLFASRSKVQAVGKEAA 319
           LARL ASR ++Q+  +E A
Sbjct: 301 LARLVASRQRLQSADRELA 319


>gi|300311722|ref|YP_003775814.1| phosphate acetyl/butaryl
           transferase [Herbaspirillum seropedicae SmR1]
          Length = 484

 Score =  328 bits (842), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 171/283 (60%), Positives = 211/283 (74%), Gaps = 1/283 (0%)

Query: 28  VAVVHPCSAEALQGALEAREEGLLEPLLVGPEARIRRVAEEAGLSLAGLQIESTEHSHAA 87
           VAVVHPC   +L   L+A   GL+ P+LV P +R+  +AE   L ++   +E   HSHAA
Sbjct: 199 VAVVHPCDELSLAAVLDAHAAGLISPILVAPRSRLLALAESHKLDISAFPLEDVPHSHAA 258

Query: 88  AARAVELAVQGQVSALMKGSLHSDELLGAVVASGSGLRTERRISHVYAMAIPTYAKPLII 147
           AARA+EL + G+V  LMKGSLH++E +GAVVA   GL T+RR+SH Y M  P+Y +P II
Sbjct: 259 AARAIELVMHGKVEMLMKGSLHTEEFMGAVVAC-PGLHTKRRMSHCYLMQTPSYPRPFII 317

Query: 148 TDAAINIAPTLAHKRDICQNAIDLLHVMGVPRPHVAVLAAVETVNPAMPSTLDAAALTVM 207
           TDAA+NI P LA K DI +NAI+L HV+GV  P VA+LAAVETVNP MP+TLDAAAL  M
Sbjct: 318 TDAAVNIEPGLAEKADIIRNAIELAHVIGVKTPKVAILAAVETVNPRMPATLDAAALCKM 377

Query: 208 ATRHQITGALVDGPLAFDNAISLQSASIKQITSPVAGSADILLVPDLEAGNMLAKQLIYL 267
           A R QITGA++DGPLAFDNA+S  SA +K I S VAG ADIL+VPDLE+GN+LAKQL Y+
Sbjct: 378 ADRGQITGAILDGPLAFDNAVSPVSARVKGIRSEVAGQADILVVPDLESGNLLAKQLEYM 437

Query: 268 SQAEAAGLVLGARVPVILTSRADSLRVRLASSALARLFASRSK 310
             A +AGLVLGAR+P+ILTSRADS   RLAS A+AR+ A   +
Sbjct: 438 GGAISAGLVLGARIPLILTSRADSRETRLASCAVARMLAQHYR 480


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.318    0.130    0.352 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 798,122
Number of extensions: 29247
Number of successful extensions: 155
Number of sequences better than 1.0e-08: 3
Number of HSP's gapped: 153
Number of HSP's successfully gapped: 3
Length of query: 319
Length of database: 1,619,870
Length adjustment: 85
Effective length of query: 234
Effective length of database: 1,217,395
Effective search space: 284870430
Effective search space used: 284870430
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 130 (54.7 bits)