BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0015.0511.p
         (356 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300312493|ref|YP_003776585.1| fatty acid desaturase [Herbaspi...   696   0.0  

>gi|300312493|ref|YP_003776585.1| fatty acid desaturase
           [Herbaspirillum seropedicae SmR1]
          Length = 390

 Score =  696 bits (1797), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 332/355 (93%), Positives = 344/355 (96%)

Query: 1   MPHRKIIRSWVIPISQRSTAIALALSVLDFCLFGASLAAIVWAPWLLAKIALGVVNGFII 60
           MPHRK+IRSWVIP+S+RSTAIAL LSV+DF LFGASLAAIVWAPWLLAKIALGVVNGFII
Sbjct: 35  MPHRKVIRSWVIPLSKRSTAIALLLSVIDFALFGASLAAIVWAPWLLAKIALGVVNGFII 94

Query: 61  GRLFILGHDACHQAFTPSRKLNTWLGRLLFMPSLTPYSLWAVGHNVVHHGYTNLKGFDFV 120
           GRLFILGHDACHQAFTP+RKLNTWLGRLLFMPSLTPYSLWAVGHNVVHHGYTNLKGFDFV
Sbjct: 95  GRLFILGHDACHQAFTPNRKLNTWLGRLLFMPSLTPYSLWAVGHNVVHHGYTNLKGFDFV 154

Query: 121 WQPRSLEEFRALPRWRQRLERIYRSGFGPGLYYMIDMWWKRMYFPSKKQMPTRRAEFMWD 180
           WQPRSLEEF ALPRWRQRLERIYRSGFGPGLYYMIDMWWKRMYFPSKKQMPTRRAEFMWD
Sbjct: 155 WQPRSLEEFNALPRWRQRLERIYRSGFGPGLYYMIDMWWKRMYFPSKKQMPTRRAEFMWD 214

Query: 181 GVLVTAVAVVWIAGLAWAAQATEQSFWTLLVTGFAIPLLFWKAMIGFVVYVHHTHTSVAW 240
           G LVTAVA VW+ GLAWAAQ+T QSFWTLLVTGF IPLLFWKAMIGFVVYVHHTHTSVAW
Sbjct: 215 GALVTAVAAVWVGGLAWAAQSTGQSFWTLLVTGFVIPLLFWKAMIGFVVYVHHTHTSVAW 274

Query: 241 YEDKITWAAAQPFVSTTVHLTFGRYWGSLLHHIMEHTAHHVDMSVPLYRLKQAQKKLETM 300
           Y+DK+TWAAAQPFVSTTVHLTFGR+WG+LLHHIMEHTAHHVDMSVPLYRLKQAQKKLETM
Sbjct: 275 YDDKVTWAAAQPFVSTTVHLTFGRFWGALLHHIMEHTAHHVDMSVPLYRLKQAQKKLETM 334

Query: 301 LPGRIVIQRFSWRWYFDTARRCKLYDFKRLCWTDYRGRPTSTPLPLPDMSKPTAE 355
           LPGRIVIQRFSWRWYFDTARRCKLYDFKRLCWTDYRGRPTS PLPLP+MSK  AE
Sbjct: 335 LPGRIVIQRFSWRWYFDTARRCKLYDFKRLCWTDYRGRPTSQPLPLPEMSKSMAE 389


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.329    0.139    0.484 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 1,257,355
Number of extensions: 54620
Number of successful extensions: 185
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 185
Number of HSP's successfully gapped: 1
Length of query: 356
Length of database: 1,619,870
Length adjustment: 86
Effective length of query: 270
Effective length of database: 1,212,660
Effective search space: 327418200
Effective search space used: 327418200
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 131 (55.1 bits)