BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0015.0470.p
         (282 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300312528|ref|YP_003776620.1| lysophospholipase [Herbaspirill...   478   e-136
gi|300309425|ref|YP_003773517.1| lysophospholipase [Herbaspirill...    89   4e-19

>gi|300312528|ref|YP_003776620.1| lysophospholipase [Herbaspirillum
           seropedicae SmR1]
          Length = 282

 Score =  478 bits (1230), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 232/271 (85%), Positives = 246/271 (90%)

Query: 8   QEHWIDAADGTRLFCRDWLLPGATSAVQMVHGLGEHGGRYAALAHLFNAAGCSVRICDHR 67
           QEHWIDA DGTRLFCRDWLLPGAT+AVQMVHGLGEHGGRY +LA LFN AG SVRICD R
Sbjct: 8   QEHWIDADDGTRLFCRDWLLPGATAAVQMVHGLGEHGGRYFSLARLFNEAGLSVRICDQR 67

Query: 68  GHGNSGGRQGSLIQPDDLLRDLKQTFDDFSRRTQCTPLLFGHSMGGLVAARFATGGFSPV 127
           GHGNSGG QGSLI+PDDLLRDLK +FDDFSRRT+C P+LFGHSMGGLVAARFATGG+SPV
Sbjct: 68  GHGNSGGVQGSLIRPDDLLRDLKLSFDDFSRRTECVPVLFGHSMGGLVAARFATGGYSPV 127

Query: 128 RALALSSPALALDLSGWQRLLLKVSSAIAPGLALPTALPAERISHDPHEVRAYRQDPLNH 187
           RALALSSPALALD+ GWQ+LLL VS+AIAPGLALPTALPA RISHDPHEVRAYR+DPLNH
Sbjct: 128 RALALSSPALALDMKGWQKLLLAVSTAIAPGLALPTALPASRISHDPHEVRAYRKDPLNH 187

Query: 188 GKIAPRMLNFMLDAMHHVARDAAQFTRPVLLQVAGDDAFVAPRGSRAFFEALPGERKTLH 247
           GKIAPRML+FMLDAM  V R+A QFTRPVLLQVAGDDAFVAPRGSRAFF+ALP  RKTLH
Sbjct: 188 GKIAPRMLHFMLDAMRQVEREAGQFTRPVLLQVAGDDAFVAPRGSRAFFDALPSGRKTLH 247

Query: 248 WYASAYHEIFNEEAGLREQAMHDLREWLGQL 278
           WY  AYHEIFNEEA LR QAM DLR WL QL
Sbjct: 248 WYEHAYHEIFNEEASLRAQAMQDLRNWLAQL 278


>gi|300309425|ref|YP_003773517.1| lysophospholipase [Herbaspirillum
           seropedicae SmR1]
          Length = 583

 Score = 89.0 bits (219), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 76/263 (28%), Positives = 111/263 (42%), Gaps = 10/263 (3%)

Query: 6   PVQEHWIDAADGTRLFCRDWLLPGATS----AVQMVHGLGEHGGRYAALAHLFNAAGCSV 61
           PVQEH     D   LF R W  P   +    AV M H   EHGGR A L    +      
Sbjct: 4   PVQEHQFTTHDDQTLFYRRW--PATATERRGAVVMFHRGHEHGGRMAHLVDELDLPDFDF 61

Query: 62  RICDHRGHGNSGGRQGSLIQPDDLLRDLKQTFDDFSRRTQCTP---LLFGHSMGGLVAAR 118
              D RGHG S G +G      D +RD++       ++ Q       +   S+G ++ + 
Sbjct: 62  YAWDARGHGRSPGPRGYSPSFADSVRDVQTFIGHLRQQWQLAEEDLAVLAQSVGAVLVST 121

Query: 119 FATGGFSPVRALALSSPALALDLS-GWQRLLLKVSSAIAPGLALPTALPAERISHDPHEV 177
           +A      VR L L+SPA  + L   + R  L +   +     + + + A+ ++HDP   
Sbjct: 122 WAHDYAPRVRCLVLASPAFKVKLYVPFARPGLALQQKLRGNFFVNSYVKAKYLTHDPARQ 181

Query: 178 RAYRQDPLNHGKIAPRMLNFMLDAMHHVARDAAQFTRPVLLQVAGDDAFVAPRGSRAFFE 237
            +Y  DPL    I+  +L  + +A   V  DA   T P  L ++G D  V       FF+
Sbjct: 182 ASYDSDPLISRPISVNILLALYEAAERVVADAQAITIPTQLLISGADWVVHHGPQHDFFD 241

Query: 238 ALPGERKTLHWYASAYHEIFNEE 260
            L    K  H     YH+ F E+
Sbjct: 242 RLGTTTKEKHVLPGFYHDTFGEK 264


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.323    0.138    0.436 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 935,054
Number of extensions: 38506
Number of successful extensions: 115
Number of sequences better than 1.0e-08: 2
Number of HSP's gapped: 113
Number of HSP's successfully gapped: 2
Length of query: 282
Length of database: 1,619,870
Length adjustment: 84
Effective length of query: 198
Effective length of database: 1,222,130
Effective search space: 241981740
Effective search space used: 241981740
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 130 (54.7 bits)