BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0015.0418.p
         (197 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300313826|ref|YP_003777918.1| heme oxygenase [Herbaspirillum ...   284   4e-78

>gi|300313826|ref|YP_003777918.1| heme oxygenase [Herbaspirillum
           seropedicae SmR1]
          Length = 196

 Score =  284 bits (726), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 153/195 (78%), Positives = 166/195 (85%)

Query: 2   MNPLSTAPALLSARLKNETATLHEQMHALMEQAQPFASRAQYVRFVAAQYHFQRDVEHLF 61
           M P++T    LSARLK +TA LHEQMHALMEQAQPFA RA+Y +FVAAQYHFQRDVEHLF
Sbjct: 1   MKPVATPAPSLSARLKADTAALHEQMHALMEQAQPFADRARYAQFVAAQYHFQRDVEHLF 60

Query: 62  DDPAIQAAVPDLQVRGREAAALADLADLQAAPGEAVIATGNVAMPEALGWLYVSEGSTLG 121
           DDPA+QAAVPDLQVRGREA ALADLADL A PG+  IAT  V MPEALGWLYVSEGSTLG
Sbjct: 61  DDPALQAAVPDLQVRGREADALADLADLGAVPGQIDIATATVRMPEALGWLYVSEGSTLG 120

Query: 122 AAFLLKEVKDKLGLSESFGARNLAAYPEGRAVVWRRFVSFLDAPGLSAQEQDAVVAGAAA 181
           AAFLLK+V+ +LGL E FGARNLAAY EGRAVVWRRFV FLD  G S Q Q+AV+AGA A
Sbjct: 121 AAFLLKQVQQRLGLDEQFGARNLAAYAEGRAVVWRRFVGFLDQAGDSPQVQEAVLAGARA 180

Query: 182 AFERFGVLLKRHFAL 196
           AFERFG LL+RHFAL
Sbjct: 181 AFERFGALLRRHFAL 195


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.321    0.132    0.378 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 521,922
Number of extensions: 17580
Number of successful extensions: 95
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 95
Number of HSP's successfully gapped: 1
Length of query: 197
Length of database: 1,619,870
Length adjustment: 80
Effective length of query: 117
Effective length of database: 1,241,070
Effective search space: 145205190
Effective search space used: 145205190
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 128 (53.9 bits)