BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0015.0353.p
         (651 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300312560|ref|YP_003776652.1| xanthine dehydrogenase subunit ...  1211   0.0  

>gi|300312560|ref|YP_003776652.1| xanthine dehydrogenase subunit B
           [Herbaspirillum seropedicae SmR1]
          Length = 789

 Score = 1211 bits (3133), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 591/645 (91%), Positives = 618/645 (95%)

Query: 7   VLTPRDAHAAQSYVLPPMHLSRGEPAVALALAPHKLRGQFDVGGQEQFYLEGQISYAIPK 66
           +LTPR AHAAQSYVLPPMHLSRGEPA+ALALAPH+LRGQFDVGGQEQFYLEGQISYAIPK
Sbjct: 145 ILTPRQAHAAQSYVLPPMHLSRGEPAIALALAPHRLRGQFDVGGQEQFYLEGQISYAIPK 204

Query: 67  EGRGMHVYCSTQHPSEMQHHIATVLKLASHDVLVECRRMGGGFGGKESQSALWACAAAVA 126
           EGRGMHVYCSTQHPSEMQHH+ATVL LASHDVLVECRRMGGGFGGKESQSALWACAAAVA
Sbjct: 205 EGRGMHVYCSTQHPSEMQHHVATVLGLASHDVLVECRRMGGGFGGKESQSALWACAAAVA 264

Query: 127 AAKLRRPVKLRADRDDDMMVTGKRHCFAYDYEIGYDDDGRILAAKIDMISRAGFSADLSG 186
           AA+L+RPVKLRADRDDDMMVTGKRHCFAYDYEIGYDD GRI+AAKI+MISRAGFSADLSG
Sbjct: 265 AARLQRPVKLRADRDDDMMVTGKRHCFAYDYEIGYDDHGRIVAAKIEMISRAGFSADLSG 324

Query: 187 PVATRAVCHFDNAYYLSDVEIHAMCGKTNTQSNTAFRGFGGPQGALAIEYILDDIARNLG 246
           PVATRAVCHFDNAYYLSDV+I AMCGKTNTQSNTAFRGFGGPQGALAIEYI+DDIAR+LG
Sbjct: 325 PVATRAVCHFDNAYYLSDVDIRAMCGKTNTQSNTAFRGFGGPQGALAIEYIIDDIARHLG 384

Query: 247 RDPLEIRRNNFYGPSDAEGPEARNVTHYGQKVEDNVIHGLVDQLERSSRYQERRRAVAEF 306
           RDPLEIRRNNFYGPSD EGP+ARNVTHYGQKVEDN+I  LVDQLERSSRYQERR+AVA F
Sbjct: 385 RDPLEIRRNNFYGPSDEEGPQARNVTHYGQKVEDNIIPALVDQLERSSRYQERRQAVAAF 444

Query: 307 NAGSTVLKKGLALTPVKFGISFNVPHLNQAGSLVHVYTDGSVLVNHGGTEMGQGLNTKVA 366
           NAGSTVLKKGLALTPVKFGISFNVPHLNQAG+LVHVYTDGSVLVNHGGTEMGQGLNTKVA
Sbjct: 445 NAGSTVLKKGLALTPVKFGISFNVPHLNQAGALVHVYTDGSVLVNHGGTEMGQGLNTKVA 504

Query: 367 QVVANALGVPLEKVRCTATDTSKIANTSATAASTGSDLNGKAAQDAALQIRARLADVAAR 426
           QVVA+ LGVPLE+VRC+ATDTSK+ANTSATAASTGSDLNGKAAQDAALQ+R RLA VAA 
Sbjct: 505 QVVAHTLGVPLERVRCSATDTSKVANTSATAASTGSDLNGKAAQDAALQVRTRLAQVAAT 564

Query: 427 HFGVEAATVRFADGLVLAGEQSLPFVELVMKAYLQRVQLWSDGFYSTPKVHWDAKRMHGH 486
             GVE   VRFADG V+AG QS+ F ELVMKAYLQRVQLWSDGFYSTPKVHWDAKRMHGH
Sbjct: 565 LLGVEPTAVRFADGRVMAGAQSMAFAELVMKAYLQRVQLWSDGFYSTPKVHWDAKRMHGH 624

Query: 487 PFFYFAYAAAVSEVVIDTLTGEWKLLQADLLYDAGESLNPALDIGQVEGGFIQGMGWLTT 546
           PFFYFAYAAAVSEVVIDTLTGEWKLLQADLLYDAG+SLNPALDIGQVEGGFIQGMGWLTT
Sbjct: 625 PFFYFAYAAAVSEVVIDTLTGEWKLLQADLLYDAGQSLNPALDIGQVEGGFIQGMGWLTT 684

Query: 547 EELWWNKDGKLMTHAPSTYKIPAISDCPEAFRTELYANSNVSDTIHRSKAVGEPPLLLPF 606
           EELWWNKDGKLMTHAPSTYKIPAISDCP   RTEL+ N NVSDTIHRSKAVGEPPLLLPF
Sbjct: 685 EELWWNKDGKLMTHAPSTYKIPAISDCPARLRTELFQNRNVSDTIHRSKAVGEPPLLLPF 744

Query: 607 SVFLAIRDAVSSVGGHRVNPPLRAPATSEAILDAVDAVRAATLTQ 651
           SVFLAIRDAVS+VGGHRVNPPLRAPATSEAILDAVDAVRAAT ++
Sbjct: 745 SVFLAIRDAVSAVGGHRVNPPLRAPATSEAILDAVDAVRAATASR 789


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.319    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 2,075,083
Number of extensions: 89650
Number of successful extensions: 244
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 243
Number of HSP's successfully gapped: 1
Length of query: 651
Length of database: 1,619,870
Length adjustment: 91
Effective length of query: 560
Effective length of database: 1,188,985
Effective search space: 665831600
Effective search space used: 665831600
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 134 (56.2 bits)