BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0015.0280.p
         (400 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300312586|ref|YP_003776678.1| bifunctional folylpolyglutamate...   712   0.0  

>gi|300312586|ref|YP_003776678.1| bifunctional folylpolyglutamate
           synthase/dihydrofolate synthase [Herbaspirillum
           seropedicae SmR1]
          Length = 437

 Score =  712 bits (1839), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 357/366 (97%), Positives = 362/366 (98%)

Query: 1   MTSQASPTPATLNEWLALLEQRHFKQIDMGLDRVQAVKEKLDIRFDCPVIMVAGTNGKGS 60
           MTSQASPTP TLNEWLALLEQRHFKQIDMGL+RV  VK+KLDI FDCPVIMVAGTNGKGS
Sbjct: 1   MTSQASPTPTTLNEWLALLEQRHFKQIDMGLERVMQVKQKLDIHFDCPVIMVAGTNGKGS 60

Query: 61  TCAMLESILLRAGYRVGLYIKPHFLHFNERARLSGDMASDAQLIAAFEAVEAQRGDISLT 120
           TCAMLESILLRAGYRVGLY+KPHFLHFNERARLSGDMASDAQLIAAFEAVEAQRGDISLT
Sbjct: 61  TCAMLESILLRAGYRVGLYMKPHFLHFNERARLSGDMASDAQLIAAFEAVEAQRGDISLT 120

Query: 121 YFEFTTLAIMKLLADARQDVVILEVGLGGRLDAVNVIDADVAIVTSIDIDHTEYLGETRE 180
           YFEFTTLAIMKLLADARQDVVILEVGLGGRLDAVNVIDADVAIVTSIDIDHTEYLGETRE
Sbjct: 121 YFEFTTLAIMKLLADARQDVVILEVGLGGRLDAVNVIDADVAIVTSIDIDHTEYLGETRE 180

Query: 181 EIGFEKAGIFRPGKVAVCGDPVPPKSLIAHAEKIGADLWLMGRDFNYQGDKQQWAYGGRG 240
           EIGFEKAGIFRPGKVAVCGDP+PPKSLIAHAEKIGADLWLMGRDFNYQGDKQQWAYGGRG
Sbjct: 181 EIGFEKAGIFRPGKVAVCGDPLPPKSLIAHAEKIGADLWLMGRDFNYQGDKQQWAYGGRG 240

Query: 241 MRRNSLAYPSLRGANQILNASAALAALEALREVLPVGAQEVRTGLATVELPGRFQVLPGQ 300
           MRRNSLAYPSLRGANQ+LNASAALAALEALREVLPVGAQEVRTGLATVELPGRFQVLPGQ
Sbjct: 241 MRRNSLAYPSLRGANQLLNASAALAALEALREVLPVGAQEVRTGLATVELPGRFQVLPGQ 300

Query: 301 PLVILDVAHNPHAAATLAQNLDNMGFHPYTYAVFGSMLDKDIEGVIGHLKDKIDHWCVTD 360
           PLVILDVAHNPHAAATLAQNLDNMGFHPYTYAVFGSMLDKDIEGVIGHLKDKIDHWCVTD
Sbjct: 301 PLVILDVAHNPHAAATLAQNLDNMGFHPYTYAVFGSMLDKDIEGVIGHLKDKIDHWCVTD 360

Query: 361 LPLPRA 366
           LPLPRA
Sbjct: 361 LPLPRA 366


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.321    0.138    0.413 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 1,242,315
Number of extensions: 51282
Number of successful extensions: 160
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 160
Number of HSP's successfully gapped: 1
Length of query: 400
Length of database: 1,619,870
Length adjustment: 87
Effective length of query: 313
Effective length of database: 1,207,925
Effective search space: 378080525
Effective search space used: 378080525
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 132 (55.5 bits)