BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0015.0126.p (1174 letters) Database: BlastDatabases/689/689 4735 sequences; 1,619,870 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|300312677|ref|YP_003776769.1| two component hybrid sensor his... 2075 0.0 gi|300311948|ref|YP_003776040.1| sensor histidine kinase/respons... 200 5e-52 gi|300310566|ref|YP_003774658.1| Hpt sensor hybrid histidine kin... 181 4e-46 gi|300313023|ref|YP_003777115.1| hypothetical protein Hsero_3729... 177 3e-45 gi|300313029|ref|YP_003777121.1| two component hybrid sensor his... 162 1e-40 >gi|300312677|ref|YP_003776769.1| two component hybrid sensor histidine kinase/response regulator protein [Herbaspirillum seropedicae SmR1] Length = 1160 Score = 2075 bits (5377), Expect = 0.0, Method: Compositional matrix adjust. Identities = 1043/1164 (89%), Positives = 1097/1164 (94%), Gaps = 7/1164 (0%) Query: 14 MLKRQGKGAFSGPPLPLGPLIGFSVAILAVVLIALFTWEASVSRGLAANAVSHTMKVREQ 73 MLKRQGKGAFSGPPLPLGPLIGF+VAILAVVLIALFT+EASVSRG AANAVSHTMKVREQ Sbjct: 1 MLKRQGKGAFSGPPLPLGPLIGFAVAILAVVLIALFTYEASVSRGQAANAVSHTMKVREQ 60 Query: 74 LQVLVSTLKDAETSQRGFLLTGTESYLSPYNQARAALPGEIARLRELLSDNPDQLQRLSQ 133 LQ LVSTLKDAETSQRG+LLTGTESYLSPYNQARAALPGEIARLR LL+DNPDQLQRLSQ Sbjct: 61 LQSLVSTLKDAETSQRGYLLTGTESYLSPYNQARAALPGEIARLRALLADNPDQLQRLSQ 120 Query: 134 IERVVADKLEELAETVSRRRNGDTAGALAVVQSDRGKMFMDRVRVLSRDMEEQERDLLAS 193 IE + DKL+ELAET+ RR GD A ALAVVQSDRGKM MDRVR L+R+ME +ERDLLA+ Sbjct: 121 IEGITNDKLQELAETIDLRRKGDAAAALAVVQSDRGKMSMDRVRTLAREMEGEERDLLAA 180 Query: 194 RQSDWRDAVVFSTAVAWGGSGLLLVLIIAAAMTTSRDYRAREKQTWIRNGQMGLAERLQG 253 RQSDWRDAV FSTAVAWGGSGLLLVLI+AAAMTTSRDYR REKQ WIR GQMGLAERLQG Sbjct: 181 RQSDWRDAVSFSTAVAWGGSGLLLVLIVAAAMTTSRDYRQREKQAWIRAGQMGLAERLQG 240 Query: 254 EQRLGALGENTLAFLTAYLNAQVGAIYLRTDSGDFQRFAAYALEEDASEQPPHLRDGQGL 313 EQRL ALG+NTL+FLTAYLNAQVGAIYLR+D GDF+RFA++AL D ++ P L GQGL Sbjct: 241 EQRLDALGDNTLSFLTAYLNAQVGAIYLRSDGGDFERFASHAL--DDADGPRTLHSGQGL 298 Query: 314 LGQAAKLNRAMHVKEVPAQYLTVSSSVGRHAPRELLIVPAAADGVVQAVFELGFLRQVRA 373 LGQAAKLNRAMHVK+VP YLT+SS+VGR PREL++VPA+ADG+VQAVFELGFLRQVR Sbjct: 299 LGQAAKLNRAMHVKDVPEDYLTISSAVGRRQPRELMVVPASADGMVQAVFELGFLRQVRP 358 Query: 374 EEEELLARLSDQIAIAVRSSKDRTRLEELLEETQRQSEELQAQQEELRVNNEELEEQGQA 433 EEEELLARLSDQIAIAVRSSKDRTRLEELLEETQRQSEELQAQQEELRVNNEELEEQGQA Sbjct: 359 EEEELLARLSDQIAIAVRSSKDRTRLEELLEETQRQSEELQAQQEELRVNNEELEEQGQA 418 Query: 434 LKASQLRLETQQAELEETNAQLEEQTQLLEIQKDDLAKTQVVLVEKATELERANQYKSEF 493 LKASQLRLETQQAELEETNAQLEEQTQLLE+QKDDLAKTQVVLVEKATELERANQYKSEF Sbjct: 419 LKASQLRLETQQAELEETNAQLEEQTQLLELQKDDLAKTQVVLVEKATELERANQYKSEF 478 Query: 494 LANMSHELRTPLNSTLILAKLLADNKQGNLSDEQVRFAQTISSAGNDLLALINDILDLSK 553 LANMSHELRTPLNSTLILAKLLADNKQGNLSDEQVRFAQTISSAGNDLLALINDILDLSK Sbjct: 479 LANMSHELRTPLNSTLILAKLLADNKQGNLSDEQVRFAQTISSAGNDLLALINDILDLSK 538 Query: 554 MEAGKLDIVSESFVVSKMAEELKASFAMTAQQKGLGFKVEVEPGVPQRMETDMQRLGQIL 613 MEAGKLDIV ESF ++K+A+EL ASFA+TAQQKGLGFKVEVEPGVPQRMETD+QRLGQIL Sbjct: 539 MEAGKLDIVPESFPLTKLADELSASFAITAQQKGLGFKVEVEPGVPQRMETDIQRLGQIL 598 Query: 614 KNLLSNAIKFTEKGEVSLRIYADAGGRIAFAVRDTGIGIGADQHQFIFEAFRQADGSTHR 673 KNLLSNAIKFTEKGEVSLRIY DAGGRIAFAVRDTGIGIG DQHQFIFEAFRQADGSTHR Sbjct: 599 KNLLSNAIKFTEKGEVSLRIYPDAGGRIAFAVRDTGIGIGEDQHQFIFEAFRQADGSTHR 658 Query: 674 KYGGTGLGLSISRDLAHLLGGDIQVQSRVGEGSIFTLSLPQVYSGEQAV--VRTPAAVAP 731 KYGGTGLGLSISRDLAHLLGGDI+V SR+GEGSIFTLSLP +YS EQAV A Sbjct: 659 KYGGTGLGLSISRDLAHLLGGDIRVTSRLGEGSIFTLSLPPLYSSEQAVSNTAPEPTPAA 718 Query: 732 SAAAATLQAAQVATAPDIRIP-SPQVVPGTPAKLQDIAIDDDRHRIESSSRLILVIEDDT 790 +AAA+TLQAA VATAPD+RI +P P +LQ+I+IDDDR RIE+SSRLILVIEDD Sbjct: 719 AAAASTLQAAHVATAPDVRINRTP--AAAAPQRLQEISIDDDRDRIETSSRLILVIEDDA 776 Query: 791 AFAMILRDLAHEMGFQCVVTHSANEGVSAAEMYRPSAILMDMNLPDFSGLGVLDQIKRNP 850 AFAMILRDLA EMGFQCVVTHSANEGV+AAEMYRPSAILMDMNLPDFSGLGVLDQIKRNP Sbjct: 777 AFAMILRDLAREMGFQCVVTHSANEGVAAAEMYRPSAILMDMNLPDFSGLGVLDQIKRNP 836 Query: 851 KTRHIPVHVVSVADYSHEALERGAIGYALKPVQREELVGAIRKLEAKFLQGLRHVLVVED 910 KTRHIPVHVVSVADYSHEA+ERGAIGYALKPVQREEL+GAIRKLEAKFLQGLRHVLVVED Sbjct: 837 KTRHIPVHVVSVADYSHEAMERGAIGYALKPVQREELIGAIRKLEAKFLQGLRHVLVVED 896 Query: 911 DARQLDSIRQLLAGENINLVGVRTAADALARLRETTFDCMVMDLNLPDLSGYQLLEKMAE 970 DARQLDSIRQLLAGENINLVGVRTAADALARLR+ TFDCMVMDLNLPDLSGYQLLEKMAE Sbjct: 897 DARQLDSIRQLLAGENINLVGVRTAADALARLRQNTFDCMVMDLNLPDLSGYQLLEKMAE 956 Query: 971 QEHVAFPPVIVYTGRSLSAEEEQHLRRFSRSIIIKDARSPERLLDEVTLFLHQVETTLPP 1030 QEHVAFPPVIVYTGRSLSAEEEQ+LRRFSRSIIIKDARSPERLLDEVTLFLHQVETTLP Sbjct: 957 QEHVAFPPVIVYTGRSLSAEEEQNLRRFSRSIIIKDARSPERLLDEVTLFLHQVETTLPA 1016 Query: 1031 ESQRMLKVARDRETVFEGRRILVVEDDVRNIFALSSVLEPKGMKVDIARNGREALEALQR 1090 ESQRMLKVARDRETVFEGRRILVVEDDVRNIFALSSVLEPKGMKV+IARNGREAL+ALQR Sbjct: 1017 ESQRMLKVARDRETVFEGRRILVVEDDVRNIFALSSVLEPKGMKVEIARNGREALQALQR 1076 Query: 1091 SQEQPGAPIDLVLMDIMMPEMDGLTAMREIRKQAVWKRLPIIALTAKAMKDDQEKCLAAG 1150 SQ++P APIDLVLMDIMMPEMDGLTAMREIRKQAVWKRLPIIALTAKAMKDDQEKCLAAG Sbjct: 1077 SQDKPDAPIDLVLMDIMMPEMDGLTAMREIRKQAVWKRLPIIALTAKAMKDDQEKCLAAG 1136 Query: 1151 ANDYIAKPLDVEKLLSLVRVWMPK 1174 ANDYIAKPLDVEKLLSLVRVWMPK Sbjct: 1137 ANDYIAKPLDVEKLLSLVRVWMPK 1160 >gi|300311948|ref|YP_003776040.1| sensor histidine kinase/response regulator protein [Herbaspirillum seropedicae SmR1] Length = 1145 Score = 200 bits (509), Expect = 5e-52, Method: Compositional matrix adjust. Identities = 153/447 (34%), Positives = 231/447 (51%), Gaps = 62/447 (13%) Query: 456 EEQTQLLEIQKDDLAKTQVVLVEKATEL-ERANQYKSEFLANMSHELRTPLNSTLILAKL 514 E QT LL +Q+ + K +++A E E AN KS F+A MSHELRTPLNS L A++ Sbjct: 654 ERQTNLL-LQEIEAHKQTDAELQRAKEAAESANLAKSRFVAGMSHELRTPLNSILGYAQI 712 Query: 515 LADNKQGNLSDEQVRFAQTISSAGNDLLALINDILDLSKMEAGKLDIVSESFVVSKMAEE 574 L + + + I +G LL+LI+ +LD++K+EAGK+ + S+ + E+ Sbjct: 713 L--HVDATIPPARKDAIGVIRRSGEHLLSLIDGLLDIAKIEAGKMRLASDELALEAFLEQ 770 Query: 575 LKASFAMTAQQKGLGFKVEVEPGVPQRMETDMQRLGQILKNLLSNAIKFTEKGEVSLRI- 633 + FA A+QKGL F+ + +PQ + D +RL QIL NLL NA+KFT+ G V+LR+ Sbjct: 771 IVGMFAPQAEQKGLHFRFDKSGRLPQIVHADQKRLRQILINLLGNAVKFTDHGGVTLRLR 830 Query: 634 YADAGGRIA-FAVRDTGIGIGADQHQFIFEAFRQADGSTHRKYGGTGLGLSISRDLAHLL 692 YA IA F V DTGIGI D + IF F ++ + R+ GTGLGL+ISR L H++ Sbjct: 831 YAR---EIAYFDVIDTGIGIADDDRERIFLPFERSSAANLREDIGTGLGLAISRMLVHIM 887 Query: 693 GGDIQVQSRVGEGSIFTLSLPQVYSGEQAVVRTPAAVAPSAAAATLQAAQVATAPDIRIP 752 GG++ VQS+VG+GS F L ++Y P++ +P Sbjct: 888 GGELSVQSQVGQGSSFHL---KIY-----------------------------LPEVHVP 915 Query: 753 SPQVVPGTPAKLQDIAIDDDRHRIESSSRLILVIEDDTAFAMILRDLAHEMGFQCVVTHS 812 P+ I ++D SR ILV++D + +L+D+ +GF Sbjct: 916 RPR-----------IKLEDQMSGYAGPSRHILVVDDQASQRRLLKDMLMPLGF---TVSE 961 Query: 813 ANEGVSAAEMY---RPSAILMDMNLPDFSGLGVLDQIKRNPKTRHIPVHVVSVADYS--H 867 A+ G++ E P +L+D+ +P G V I R +P+ +VS + H Sbjct: 962 ADSGLACMETLGHALPDLVLLDIAMPQMDGWSVARAI-RARGLAQLPILLVSANAFENLH 1020 Query: 868 EALERGAIG-YALKPVQREELVGAIRK 893 E E + + +KPV EL+G IR+ Sbjct: 1021 ERNEPPLVNDFVVKPVSYHELLGKIRQ 1047 Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 42/121 (34%), Positives = 64/121 (52%), Gaps = 7/121 (5%) Query: 1049 RRILVVEDDVRNIFALSSVLEPKGMKVDIARNGREALEALQRSQEQPGAPIDLVLMDIMM 1108 R ILVV+D L +L P G V A +G +E L + DLVL+DI M Sbjct: 933 RHILVVDDQASQRRLLKDMLMPLGFTVSEADSGLACMETLGHALP------DLVLLDIAM 986 Query: 1109 PEMDGLTAMREIRKQAVWKRLPIIALTAKAMKDDQEKCLAAGANDYIAKPLDVEKLLSLV 1168 P+MDG + R IR + + +LPI+ ++A A ++ E+ ND++ KP+ +LL + Sbjct: 987 PQMDGWSVARAIRARGL-AQLPILLVSANAFENLHERNEPPLVNDFVVKPVSYHELLGKI 1045 Query: 1169 R 1169 R Sbjct: 1046 R 1046 >gi|300310566|ref|YP_003774658.1| Hpt sensor hybrid histidine kinase [Herbaspirillum seropedicae SmR1] Length = 723 Score = 181 bits (458), Expect = 4e-46, Method: Compositional matrix adjust. Identities = 105/268 (39%), Positives = 154/268 (57%), Gaps = 9/268 (3%) Query: 470 AKTQVVLVEKATELERANQYKSEFLANMSHELRTPLNSTLILAKLLADNKQGNLSDEQVR 529 A+T LV+ + A + FL+ MSHE+RTP+N+ L +A LL + L +Q Sbjct: 67 ARTAEKLVQAKEAADHAMLTRGAFLSTMSHEIRTPMNAVLGMAGLLRSTR---LDTQQAE 123 Query: 530 FAQTISSAGNDLLALINDILDLSKMEAGKLDIVSESFVVSKMAEELKASFAMTAQQKGLG 589 FA+ I + + LL ++ND+LD SK++ GK+DI F ++K+ E + + A++K + Sbjct: 124 FAKAIEDSAHALLGIVNDVLDFSKIDVGKMDIAVVEFDLAKVVEASAEALSFKAREKRVR 183 Query: 590 FKVEVEPGVPQRMETDMQRLGQILKNLLSNAIKFTEKGEVSLRIYA----DAGGRIAFAV 645 ++ +P R+ D R+ QIL NLL NA+KFT GEV LR+ A R+ F V Sbjct: 184 LLAHLDSRLPPRLVGDPGRIRQILLNLLGNALKFTHAGEVLLRVQALQVTSDHCRVRFEV 243 Query: 646 RDTGIGIGADQHQFIFEAFRQADGSTHRKYGGTGLGLSISRDLAHLLGGDIQVQSRVGEG 705 RD+GIG+ D + +F F QAD S R+YGGTGLGLSI + L L+GG I V+S +G G Sbjct: 244 RDSGIGMDEDTLRRLFSPFAQADSSVTRQYGGTGLGLSICKRLVELMGGSIGVESALGTG 303 Query: 706 SIFTLSLPQVYSGEQAVVRT--PAAVAP 731 S F L + ++R+ PAA P Sbjct: 304 SCFWFELGIPVTTGPGMIRSEPPAADRP 331 Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 55/127 (43%), Positives = 67/127 (52%), Gaps = 7/127 (5%) Query: 1034 RMLKVARDRETVFEGRRILVVEDDVRNIFALSSVLEPKGMKVDIARNGREALEALQRSQE 1093 RM A R+ R IL+VED+V N L G DIA NG EALE L R + Sbjct: 461 RMAAPATPRQGHSGQRDILLVEDNVMNQKVAVYQLNAMGYAADIAANGLEALERLARHR- 519 Query: 1094 QPGAPIDLVLMDIMMPEMDGLTAMREIRK-QAVWKRLPIIALTAKAMKDDQEKCLAAGAN 1152 LVLMD MP +DG R IR+ Q I+A+TA AM D+E+CL AG + Sbjct: 520 -----YALVLMDCQMPLLDGYETTRRIRRMQGELAHTTIVAMTANAMAGDRERCLEAGMD 574 Query: 1153 DYIAKPL 1159 DY+ KPL Sbjct: 575 DYLTKPL 581 >gi|300313023|ref|YP_003777115.1| hypothetical protein Hsero_3729 [Herbaspirillum seropedicae SmR1] Length = 765 Score = 177 bits (450), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 103/239 (43%), Positives = 149/239 (62%), Gaps = 13/239 (5%) Query: 482 ELERANQYKSEFLANMSHELRTPLNSTLILAKLLADNKQGNLSDEQVRFAQTISSAGNDL 541 E + AN+ KS FLA +SHE+RTP+N L L++LL ++ LS +Q +A +I A L Sbjct: 340 EADHANEAKSHFLAMVSHEIRTPMNGILGLSELLMES---GLSSKQRDYADSIHGATGGL 396 Query: 542 LALINDILDLSKMEAGKLDIVSESFVVSKMAEELKASFAMTAQQKGLGFKVEVEPGVPQR 601 + +INDILD SK+E+GKLD+ +F ++ +EL + + Q+K + F + ++ P+ Sbjct: 397 VRIINDILDFSKIESGKLDLEMVAFHPVRLVQELSDLYRPSLQRKDVQFDLHLD--CPEN 454 Query: 602 MET--DMQRLGQILKNLLSNAIKFTEKGEVSLRIYA--DAGG----RIAFAVRDTGIGIG 653 + D RL Q+L NLLSNAIKFT+ G V L + A D G R+ FA+ DTGIGI Sbjct: 455 LSVVGDPARLKQVLGNLLSNAIKFTQAGHVQLSMSARQDESGPSRWRLFFAITDTGIGIS 514 Query: 654 ADQHQFIFEAFRQADGSTHRKYGGTGLGLSISRDLAHLLGGDIQVQSRVGEGSIFTLSL 712 + Q +F F QAD S R++GGTGLGL+IS++L L+GG I QS GE + F+ + Sbjct: 515 PEALQQLFRPFAQADSSISRRFGGTGLGLAISKNLVELMGGTIACQSIPGESTRFSFEI 573 Score = 88.2 bits (217), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 54/134 (40%), Positives = 74/134 (55%), Gaps = 9/134 (6%) Query: 1044 TVFEGRRILVVEDDVRNIFALSSVLEPKGMKVDIARNGREALEALQRSQEQPGAPIDLVL 1103 ++ G RIL+ ED N L +L KG + NG +A+EA++ DLVL Sbjct: 637 SLLAGARILMAEDTEINRQLLRILLARKGCILQEVENGLQAVEAIRTGH------YDLVL 690 Query: 1104 MDIMMPEMDGLTAMREIRKQAVWK---RLPIIALTAKAMKDDQEKCLAAGANDYIAKPLD 1160 MD MMP MDG A EIR + R PIIALTA A++ D+++CL AG +DY++KP Sbjct: 691 MDCMMPIMDGYQATAEIRAHEAARGLPRTPIIALTASAIEGDRQRCLDAGMDDYLSKPFT 750 Query: 1161 VEKLLSLVRVWMPK 1174 L+ V W+ K Sbjct: 751 QVGLMQTVEKWLQK 764 >gi|300313029|ref|YP_003777121.1| two component hybrid sensor histidine kinase/response regulator protein [Herbaspirillum seropedicae SmR1] Length = 1524 Score = 162 bits (411), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 144/429 (33%), Positives = 217/429 (50%), Gaps = 43/429 (10%) Query: 476 LVEKATELERANQYKSEFLANMSHELRTPLNSTLILAKLLADNKQGNLSDEQVRFAQTIS 535 LV+ + E+AN KS FLA++SHE+RTP+N L + +LL + L +Q + Sbjct: 883 LVDARLKAEQANSAKSLFLASVSHEIRTPMNGVLGMIQLL--QRTQPLPAQQDYLDKAEI 940 Query: 536 SAGNDLLALINDILDLSKMEAGKLDIVSESFVVSKMAEELKASFAMTAQQKGLGFKVEVE 595 SA LL L+ND+LD SKM+A +L + ++F + + L A A + Q G+ + ++ Sbjct: 941 SA-KSLLNLLNDLLDFSKMDAKQLQLDLQAFELERFGHNLAAVLAGSPPQAGVSLHIALD 999 Query: 596 PGVPQRMETDMQRLGQILKNLLSNAIKFTEKGEVSL---RIYADAGGRIAF--AVRDTGI 650 P +P+R+ D RL Q+L NL NA+KFT +G + + R+ G +A V DTGI Sbjct: 1000 PQLPRRLVGDAHRLQQVLVNLTGNALKFTHQGHIDVHFTRLDPLPGRTVALRVEVSDTGI 1059 Query: 651 GIGADQHQFIFEAFRQADGSTHRKYGGTGLGLSISRDLAHLLGGDIQVQSRVGEGSIFTL 710 GI AD+ IF+AF QA+ ST R+YGGTGLGL+IS+ L L+GG +QV S G GS F Sbjct: 1060 GIAADRLDDIFDAFTQAEASTTRRYGGTGLGLAISKHLVGLMGGQLQVSSEPGRGSRFWF 1119 Query: 711 SLPQVYSGEQAVVRTPAAVAPSAAAATLQAAQVAT---APDI--RIPSPQVVPGTPAKLQ 765 L Q+ + +V+ PAA +A LQAA AP+ P Q + G Sbjct: 1120 DL-QLAVDDDSVL-GPAAADDAARPQPLQAASHTAGSRAPETARSAPDAQCLQGVQ---- 1173 Query: 766 DIAIDDDRHRIESSSRLILVIEDDTAFAMILRDLAHEMGFQCVVTHSANEGVSAA--EMY 823 IL++ED+ + +L G Q S + GV+ A Sbjct: 1174 -----------------ILLVEDNPVNRQVASELLALSGAQVTCADSGSMGVAMACDPAR 1216 Query: 824 RPSAILMDMNLPDFSGLGVLDQIKRNPKTRHIPVHVVSVADYSHE----ALERGAIGYAL 879 +LMD+ +P G+ +I+ + R +P+ + A+ S E +E G G+ Sbjct: 1217 HFDLVLMDLQMPGMDGIEATRRIRGQYELRGLPI-LAMTANASPEDKQRCIEAGMAGHIA 1275 Query: 880 KPVQREELV 888 KP+ L+ Sbjct: 1276 KPIDIATLI 1284 Score = 85.1 bits (209), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 51/139 (36%), Positives = 77/139 (55%), Gaps = 8/139 (5%) Query: 1030 PESQRMLKVARDRETVFEGRRILVVEDDVRNIFALSSVLEPKGMKVDIARNGREALEALQ 1089 PE+ R A+ +G +IL+VED+ N S +L G +V A +G + Sbjct: 1157 PETARSAPDAQ----CLQGVQILLVEDNPVNRQVASELLALSGAQVTCADSGSMGVAMAC 1212 Query: 1090 RSQEQPGAPIDLVLMDIMMPEMDGLTAMREIRKQAVWKRLPIIALTAKAMKDDQEKCLAA 1149 P DLVLMD+ MP MDG+ A R IR Q + LPI+A+TA A +D+++C+ A Sbjct: 1213 ----DPARHFDLVLMDLQMPGMDGIEATRRIRGQYELRGLPILAMTANASPEDKQRCIEA 1268 Query: 1150 GANDYIAKPLDVEKLLSLV 1168 G +IAKP+D+ L+ ++ Sbjct: 1269 GMAGHIAKPIDIATLIPVL 1287 Database: BlastDatabases/689/689 Posted date: Apr 10, 2011 12:15 AM Number of letters in database: 1,619,870 Number of sequences in database: 4735 Lambda K H 0.317 0.132 0.360 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 4735 Number of Hits to DB: 3,070,202 Number of extensions: 124351 Number of successful extensions: 960 Number of sequences better than 1.0e-08: 71 Number of HSP's gapped: 866 Number of HSP's successfully gapped: 80 Length of query: 1174 Length of database: 1,619,870 Length adjustment: 96 Effective length of query: 1078 Effective length of database: 1,165,310 Effective search space: 1256204180 Effective search space used: 1256204180 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 136 (57.0 bits)