BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0015.0086.p (529 letters) Database: BlastDatabases/689/689 4735 sequences; 1,619,870 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|300312716|ref|YP_003776808.1| ABC transporter duplicated ATPa... 923 0.0 gi|300311168|ref|YP_003775260.1| ABC transporter ATPase [Herbasp... 442 e-125 gi|300310466|ref|YP_003774558.1| dipeptide/oligopeptide/nickel A... 298 9e-82 gi|300312478|ref|YP_003776570.1| dipeptide/oligopeptide/nickel A... 239 6e-64 gi|300310863|ref|YP_003774955.1| ABC transporter containing dupl... 227 2e-60 >gi|300312716|ref|YP_003776808.1| ABC transporter duplicated ATPase [Herbaspirillum seropedicae SmR1] Length = 529 Score = 923 bits (2386), Expect = 0.0, Method: Compositional matrix adjust. Identities = 487/519 (93%), Positives = 502/519 (96%) Query: 1 MSAPLLEVKDLTVRFGDTVVVDRVSFTIAPGEKFALVGESGSGKTVSSLAVMQLNQDARY 60 MSA LLEV +LTVRFGDTVVVDRVSF IAPGEKFALVGESGSGKTVSSLAVMQLNQDARY Sbjct: 1 MSAALLEVNNLTVRFGDTVVVDRVSFAIAPGEKFALVGESGSGKTVSSLAVMQLNQDARY 60 Query: 61 EGSILLDGQDVLKKNERQMQQVRGNDVAMIFQEPMTALNPLFTIGNQIAEVLMLHEGLNA 120 EGSILLDGQDVL K+ERQMQQVRGNDVAMIFQEPMTALNPLFTIGNQIAEVLM HEGLNA Sbjct: 61 EGSILLDGQDVLAKSERQMQQVRGNDVAMIFQEPMTALNPLFTIGNQIAEVLMHHEGLNA 120 Query: 121 RDAATRAVALLEKTGIPEPARRALSYPHELSGGQRQRAMIAMALACKPKLLIADEPTTAL 180 RDAA RAVALLEKTGIPEPARRALSYPHELSGGQRQRAMIAMALACKPKLLIADEPTTAL Sbjct: 121 RDAARRAVALLEKTGIPEPARRALSYPHELSGGQRQRAMIAMALACKPKLLIADEPTTAL 180 Query: 181 DVTIQVQILALLNQLQREENMAVLIISHDLNLVRHFADRVGVMEKGKLVESASVAELFAN 240 DVTIQVQILALLNQLQREENMAVLIISHDLNLVRHFADRVGVMEKGKLVESASVAELFAN Sbjct: 181 DVTIQVQILALLNQLQREENMAVLIISHDLNLVRHFADRVGVMEKGKLVESASVAELFAN 240 Query: 241 PQQPYTRKLLQSRPQRNAADVPAQAPVVLQAEKVRCTYHIKQGWFAKRAFHAVDGIDLQL 300 PQQPYTRKLLQSRPQRNAADV A APVVLQAE++RCTYHIKQGWFAKRAFHAVDG+DLQL Sbjct: 241 PQQPYTRKLLQSRPQRNAADVAADAPVVLQAERLRCTYHIKQGWFAKRAFHAVDGVDLQL 300 Query: 301 RRGETIGIVGESGSGKSTLGMALLRLSAASVAGSIRFEGTPISERSSRELRPLRARMQVV 360 RRGET+GIVGESGSGKSTLGMALLRLSAASVAGSIRF+G PISER RELRPLR+RMQVV Sbjct: 301 RRGETLGIVGESGSGKSTLGMALLRLSAASVAGSIRFDGVPISERPQRELRPLRSRMQVV 360 Query: 361 FQDPFASLSPRRTVEQIVGEGLALHHPGKTPEQQREAIVSALEEVGLTAAVLERYPHEFS 420 FQDPFASLSPRRTVEQIVGEGL LHHP ++ EQQR+AIV+ALEEVGL+AAVLERYPHEFS Sbjct: 361 FQDPFASLSPRRTVEQIVGEGLELHHPDRSAEQQRQAIVAALEEVGLSAAVLERYPHEFS 420 Query: 421 GGQRQRIAIARALVLQPELLLLDEPTSALDVTVQQQVLQLLADLQRRHGLAYLFITHDLA 480 GGQRQRIAIARALVLQPELLLLDEPTSALDVTVQQQVLQLLA+LQRRHGLAYLFITHDLA Sbjct: 421 GGQRQRIAIARALVLQPELLLLDEPTSALDVTVQQQVLQLLAELQRRHGLAYLFITHDLA 480 Query: 481 VVQAMAHQVIVMKDGKVVESGPAEQVLKQPQQEYTRRLV 519 VVQAMAHQVIVMKDGKVVESG QVL+QPQQEYTRRLV Sbjct: 481 VVQAMAHQVIVMKDGKVVESGATAQVLQQPQQEYTRRLV 519 >gi|300311168|ref|YP_003775260.1| ABC transporter ATPase [Herbaspirillum seropedicae SmR1] Length = 617 Score = 442 bits (1138), Expect = e-125, Method: Compositional matrix adjust. Identities = 256/566 (45%), Positives = 352/566 (62%), Gaps = 48/566 (8%) Query: 5 LLEVKDLTVRFGDTV-VVDRV---SFTIAPGEKFALVGESGSGKTVSSLAVMQLNQDARY 60 +L+V L+VRF + VD V SF + GE A+VGESGSGK+VSSLA+M+L + Sbjct: 7 VLDVNHLSVRFSTSERTVDAVRDLSFHVDQGETLAIVGESGSGKSVSSLAIMRLIEHGGG 66 Query: 61 E---GSILL---DGQ--DVLKKNERQMQQVRGNDVAMIFQEPMTALNPLFTIGNQIAEVL 112 + GS+ GQ D+ + + M+ +RG ++AMIFQEPMT+LNP+FT+G QIAE + Sbjct: 67 KIASGSMQFLRRSGQRLDLAQADNATMRSIRGAEIAMIFQEPMTSLNPVFTVGEQIAESI 126 Query: 113 MLHEGLNARDAATRAVALLEKTGIPEPARRALSYPHELSGGQRQRAMIAMALACKPKLLI 172 LH+GL A A+ +LE IPE R +PH+LSGG RQR MIAMAL+CKP LLI Sbjct: 127 RLHQGLGRAAAQAEALRMLEMVRIPEAKRVLGRHPHQLSGGMRQRVMIAMALSCKPSLLI 186 Query: 173 ADEPTTALDVTIQVQILALLNQLQREENMAVLIISHDLNLVRHFADRVGVMEKGKLVESA 232 ADEPTTALDVTIQ QIL L+ LQ+E M V+ I+HD+ +V ADRV VM +G+ VE Sbjct: 187 ADEPTTALDVTIQAQILQLIRSLQQEMQMGVIFITHDMGVVAEVADRVVVMCRGEKVEEN 246 Query: 233 SVAELFANPQQPYTRKLL------------------------QSRPQRNAADVPAQAPV- 267 +V LFA P PYT+ LL ++RP A+++ AQA + Sbjct: 247 AVNPLFAAPAHPYTQSLLAAVPRLGSMRGTDKPLRFGIAPQAEARPDLIASELQAQAEIA 306 Query: 268 -----VLQAEKVRCTYHIKQGWFA--KRAFHAVDGIDLQLRRGETIGIVGESGSGKSTLG 320 +L+ + + +K G F ++ HAV+ + L GET+ IVGESG GKST G Sbjct: 307 AQRQPILKVRDLTTRFDVKSGIFGRVRQRVHAVEKVSFDLYAGETLAIVGESGCGKSTTG 366 Query: 321 MALLRLSAASVAGSIRFEGTPISERSSRELRPLRARMQVVFQDPFASLSPRRTVEQIVGE 380 +LLRL + G + F G +++ ELR LR +Q +FQDPFASL PR TV + E Sbjct: 367 RSLLRLVDIA-GGKVEFGGRDLAQLPRSELRQLRRDIQFIFQDPFASLDPRMTVGYSIME 425 Query: 381 GLALHHPGKTPEQQREAIVSALEEVGLTAAVLERYPHEFSGGQRQRIAIARALVLQPELL 440 + +H E +E + + L VGLT +RYPHEFSGGQRQRI IARAL L P+++ Sbjct: 426 PMLVH---GMKEGAQERVDALLTRVGLTPEHGQRYPHEFSGGQRQRICIARALALNPKIV 482 Query: 441 LLDEPTSALDVTVQQQVLQLLADLQRRHGLAYLFITHDLAVVQAMAHQVIVMKDGKVVES 500 + DE SALDV++Q Q++ L+ DLQ G++++FI+HD+AVV+ ++H+V VM G++VE Sbjct: 483 IADESVSALDVSIQAQIVNLMLDLQAELGISFIFISHDMAVVERISHRVAVMYLGQIVEI 542 Query: 501 GPAEQVLKQPQQEYTRRLVAAATYAE 526 GP + + PQ YTR+L+AA A+ Sbjct: 543 GPRRAIFENPQHPYTRKLMAAVPVAD 568 Score = 184 bits (467), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 108/263 (41%), Positives = 158/263 (60%), Gaps = 20/263 (7%) Query: 4 PLLEVKDLTVRFG-----------DTVVVDRVSFTIAPGEKFALVGESGSGKTVSSLAVM 52 P+L+V+DLT RF V++VSF + GE A+VGESG GK+ + +++ Sbjct: 311 PILKVRDLTTRFDVKSGIFGRVRQRVHAVEKVSFDLYAGETLAIVGESGCGKSTTGRSLL 370 Query: 53 QLNQDARYEGSILLDGQDVLKKNERQMQQVRGNDVAMIFQEPMTALNPLFTIGNQIAEVL 112 +L A G + G+D+ + +++Q+R D+ IFQ+P +L+P T+G I E + Sbjct: 371 RLVDIA--GGKVEFGGRDLAQLPRSELRQLR-RDIQFIFQDPFASLDPRMTVGYSIMEPM 427 Query: 113 MLHEGLNARDAATRAVALLEKTGI-PEPARRALSYPHELSGGQRQRAMIAMALACKPKLL 171 ++H G+ A R ALL + G+ PE +R YPHE SGGQRQR IA ALA PK++ Sbjct: 428 LVH-GMK-EGAQERVDALLTRVGLTPEHGQR---YPHEFSGGQRQRICIARALALNPKIV 482 Query: 172 IADEPTTALDVTIQVQILALLNQLQREENMAVLIISHDLNLVRHFADRVGVMEKGKLVES 231 IADE +ALDV+IQ QI+ L+ LQ E ++ + ISHD+ +V + RV VM G++VE Sbjct: 483 IADESVSALDVSIQAQIVNLMLDLQAELGISFIFISHDMAVVERISHRVAVMYLGQIVEI 542 Query: 232 ASVAELFANPQQPYTRKLLQSRP 254 +F NPQ PYTRKL+ + P Sbjct: 543 GPRRAIFENPQHPYTRKLMAAVP 565 >gi|300310466|ref|YP_003774558.1| dipeptide/oligopeptide/nickel ABC transporter ATPase [Herbaspirillum seropedicae SmR1] Length = 645 Score = 298 bits (762), Expect = 9e-82, Method: Compositional matrix adjust. Identities = 192/537 (35%), Positives = 306/537 (56%), Gaps = 24/537 (4%) Query: 4 PLLEVKDLTVRF----GDTV-VVDRVSFTIAPGEKFALVGESGSGKTVSSLAVMQLNQDA 58 PL+EV+ L V G V +V V+FT+A GE AL+GESGSGKT +L+++ + Sbjct: 27 PLVEVQGLRVNARKEDGSQVEIVKNVNFTVARGEVLALIGESGSGKTTIALSLLGYARAG 86 Query: 59 RY--EGSILLDGQDVLKKNERQMQQVRGNDVAMIFQEPMTALNPLFTIGNQIAEVLMLHE 116 + G + + + + + +E+ + +RG+ VA I Q A NP T+ +Q+ E + H Sbjct: 87 CHIAGGQVRIGERQIDQMDEKALLAMRGHHVAYIAQSAAAAFNPARTLMDQVIESALQHG 146 Query: 117 GLNARDAATRAVALLEKTGIPEPARRALSYPHELSGGQRQRAMIAMALACKPKLLIADEP 176 ++ A +AV L +P P + YPH++SGGQ QR M AMAL P+L+I DEP Sbjct: 147 VMDKASAMRKAVELFRALALPNPDKIGERYPHQVSGGQLQRVMAAMALVTGPELVILDEP 206 Query: 177 TTALDVTIQVQILALLNQLQREENMAVLIISHDLNLVRHFADRVGVMEKGKLVESASVAE 236 TTALDVT Q+++L + +E + +SHDL +V ADR+ V+ G + E+ S ++ Sbjct: 207 TTALDVTTQIEVLRAFKNVVKELGTTAVYVSHDLAVVAQMADRIIVLRDGAVRETGSTSQ 266 Query: 237 LFANPQQPYTRKLLQSRPQRNAADV-------PAQAPVVLQAEKVRCTYHIKQGWFAKR- 288 + P YT+ LL + AA V PA P +A +R + + G+ A Sbjct: 267 VLHAPADSYTQCLLAA--ASPAARVVQLREILPATLPAEARAPLLRISGLVA-GYGAPDR 323 Query: 289 ----AFHAVDGIDLQLRRGETIGIVGESGSGKSTLGMALLRLSAASVAGSIRFEGTPISE 344 +D I+L ++RG T+GI+GESGSGK+TL A+ + A + GSI+ +G +S Sbjct: 324 LGLPGVRILDDINLTIQRGSTVGIIGESGSGKTTLARAVAGMIAPA-RGSIQLDGETLSP 382 Query: 345 RSSRELRPLRARMQVVFQDPFASLSPRRTVEQIVGEGLALHHPGKTPEQQREAIVSALEE 404 R R+Q+VFQ+ +L+P ++ +I+ L+ +H G E R L+ Sbjct: 383 TLEGRTREQFRRVQIVFQNADTALNPSHSIGRILNRPLSFYH-GLKGEAMRRRTAELLDL 441 Query: 405 VGLTAAVLERYPHEFSGGQRQRIAIARALVLQPELLLLDEPTSALDVTVQQQVLQLLADL 464 V L A V++R P E SGGQ+QR+ +ARAL +P+L+L DE TSALD V +L+LLA+L Sbjct: 442 VQLPATVIDRLPAELSGGQKQRVNLARALAAKPDLILCDEVTSALDTVVAAAILELLAEL 501 Query: 465 QRRHGLAYLFITHDLAVVQAMAHQVIVMKDGKVVESGPAEQVLKQPQQEYTRRLVAA 521 +R ++Y+FI+HD++ V+A+ ++V+ G++V + P E ++ P Y+ L+++ Sbjct: 502 RRELQVSYMFISHDISTVRAICDDIVVLYAGRMVANRPREAMMAPPYHPYSHLLLSS 558 Score = 144 bits (363), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 97/261 (37%), Positives = 137/261 (52%), Gaps = 15/261 (5%) Query: 3 APLLEVKDLTVRFG--------DTVVVDRVSFTIAPGEKFALVGESGSGKTVSSLAVMQL 54 APLL + L +G ++D ++ TI G ++GESGSGKT + AV + Sbjct: 306 APLLRISGLVAGYGAPDRLGLPGVRILDDINLTIQRGSTVGIIGESGSGKTTLARAVAGM 365 Query: 55 NQDARYEGSILLDGQDVLKKNE-RQMQQVRGNDVAMIFQEPMTALNPLFTIGNQIAEVLM 113 AR GSI LDG+ + E R +Q R V ++FQ TALNP +IG + L Sbjct: 366 IAPAR--GSIQLDGETLSPTLEGRTREQFR--RVQIVFQNADTALNPSHSIGRILNRPLS 421 Query: 114 LHEGLNARDAATRAVALLEKTGIPEPARRALSYPHELSGGQRQRAMIAMALACKPKLLIA 173 + GL R LL+ +P L P ELSGGQ+QR +A ALA KP L++ Sbjct: 422 FYHGLKGEAMRRRTAELLDLVQLPATVIDRL--PAELSGGQKQRVNLARALAAKPDLILC 479 Query: 174 DEPTTALDVTIQVQILALLNQLQREENMAVLIISHDLNLVRHFADRVGVMEKGKLVESAS 233 DE T+ALD + IL LL +L+RE ++ + ISHD++ VR D + V+ G++V + Sbjct: 480 DEVTSALDTVVAAAILELLAELRRELQVSYMFISHDISTVRAICDDIVVLYAGRMVANRP 539 Query: 234 VAELFANPQQPYTRKLLQSRP 254 + A P PY+ LL S P Sbjct: 540 REAMMAPPYHPYSHLLLSSVP 560 Score = 138 bits (347), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 90/239 (37%), Positives = 135/239 (56%), Gaps = 7/239 (2%) Query: 293 VDGIDLQLRRGETIGIVGESGSGKSTLGMALLRLSAASV---AGSIRFEGTPISERSSRE 349 V ++ + RGE + ++GESGSGK+T+ ++LL + A G +R I + + Sbjct: 49 VKNVNFTVARGEVLALIGESGSGKTTIALSLLGYARAGCHIAGGQVRIGERQIDQMDEKA 108 Query: 350 LRPLRAR-MQVVFQDPFASLSPRRTVEQIVGEGLALHHPGKTPEQQREAIVSALEEVGLT 408 L +R + + Q A+ +P RT+ V E H R+A V + L Sbjct: 109 LLAMRGHHVAYIAQSAAAAFNPARTLMDQVIESALQHGVMDKASAMRKA-VELFRALALP 167 Query: 409 A--AVLERYPHEFSGGQRQRIAIARALVLQPELLLLDEPTSALDVTVQQQVLQLLADLQR 466 + ERYPH+ SGGQ QR+ A ALV PEL++LDEPT+ALDVT Q +VL+ ++ + Sbjct: 168 NPDKIGERYPHQVSGGQLQRVMAAMALVTGPELVILDEPTTALDVTTQIEVLRAFKNVVK 227 Query: 467 RHGLAYLFITHDLAVVQAMAHQVIVMKDGKVVESGPAEQVLKQPQQEYTRRLVAAATYA 525 G ++++HDLAVV MA ++IV++DG V E+G QVL P YT+ L+AAA+ A Sbjct: 228 ELGTTAVYVSHDLAVVAQMADRIIVLRDGAVRETGSTSQVLHAPADSYTQCLLAAASPA 286 >gi|300312478|ref|YP_003776570.1| dipeptide/oligopeptide/nickel ABC transporter ATPase [Herbaspirillum seropedicae SmR1] Length = 334 Score = 239 bits (609), Expect = 6e-64, Method: Compositional matrix adjust. Identities = 128/259 (49%), Positives = 171/259 (66%), Gaps = 6/259 (2%) Query: 5 LLEVKDLTVRF----GDTVVVDRVSFTIAPGEKFALVGESGSGKTVSSLAVMQL-NQDAR 59 LL+VK+L V G V + F + GE LVGESG GK+++SLA+M L + A+ Sbjct: 4 LLDVKNLKVDLPTENGMLHAVRGIDFQVRRGEMLCLVGESGCGKSMTSLALMGLLPRKAQ 63 Query: 60 YEGS-ILLDGQDVLKKNERQMQQVRGNDVAMIFQEPMTALNPLFTIGNQIAEVLMLHEGL 118 IL DG D+ ++Q+ Q+RG +AMIFQEPMT+LNP +T+GNQ+ E ++ G+ Sbjct: 64 CSADHILFDGVDLHGMPDKQLMQLRGKRMAMIFQEPMTSLNPSYTLGNQLCEAMLQQPGV 123 Query: 119 NARDAATRAVALLEKTGIPEPARRALSYPHELSGGQRQRAMIAMALACKPKLLIADEPTT 178 + +A RA+ LL +TGI R YPH+LSGG RQR MIAM+L C P L+IADEPTT Sbjct: 124 SRAEARERALYLLHRTGISNAEDRLRQYPHQLSGGLRQRVMIAMSLMCNPDLIIADEPTT 183 Query: 179 ALDVTIQVQILALLNQLQREENMAVLIISHDLNLVRHFADRVGVMEKGKLVESASVAELF 238 ALDVTIQ QIL ++ +LQ+E AV+ I+HDL +V ADRV VM G++VE+ VA+LF Sbjct: 184 ALDVTIQAQILRMIRELQQEFGAAVIFITHDLGVVSRIADRVAVMYAGQVVETTDVAQLF 243 Query: 239 ANPQQPYTRKLLQSRPQRN 257 A P+ PYT+ LL P R Sbjct: 244 AQPRHPYTQGLLNCIPVRG 262 Score = 181 bits (460), Expect = 9e-47, Method: Compositional matrix adjust. Identities = 101/236 (42%), Positives = 147/236 (62%), Gaps = 7/236 (2%) Query: 290 FHAVDGIDLQLRRGETIGIVGESGSGKSTLGMALLRL---SAASVAGSIRFEGTPISERS 346 HAV GID Q+RRGE + +VGESG GKS +AL+ L A A I F+G + Sbjct: 21 LHAVRGIDFQVRRGEMLCLVGESGCGKSMTSLALMGLLPRKAQCSADHILFDGVDLHGMP 80 Query: 347 SRELRPLRA-RMQVVFQDPFASLSPRRTVEQIVGEGLALHHPGKTPEQQREAIVSALEEV 405 ++L LR RM ++FQ+P SL+P T+ + E + L PG + + RE + L Sbjct: 81 DKQLMQLRGKRMAMIFQEPMTSLNPSYTLGNQLCEAM-LQQPGVSRAEARERALYLLHRT 139 Query: 406 GLTAAV--LERYPHEFSGGQRQRIAIARALVLQPELLLLDEPTSALDVTVQQQVLQLLAD 463 G++ A L +YPH+ SGG RQR+ IA +L+ P+L++ DEPT+ALDVT+Q Q+L+++ + Sbjct: 140 GISNAEDRLRQYPHQLSGGLRQRVMIAMSLMCNPDLIIADEPTTALDVTIQAQILRMIRE 199 Query: 464 LQRRHGLAYLFITHDLAVVQAMAHQVIVMKDGKVVESGPAEQVLKQPQQEYTRRLV 519 LQ+ G A +FITHDL VV +A +V VM G+VVE+ Q+ QP+ YT+ L+ Sbjct: 200 LQQEFGAAVIFITHDLGVVSRIADRVAVMYAGQVVETTDVAQLFAQPRHPYTQGLL 255 >gi|300310863|ref|YP_003774955.1| ABC transporter containing duplicated ATPase [Herbaspirillum seropedicae SmR1] Length = 493 Score = 227 bits (579), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 177/520 (34%), Positives = 261/520 (50%), Gaps = 59/520 (11%) Query: 6 LEVKDLTVRFGDTVVVDRVSFTIAPGEKFALVGESGSGKTVSSLAVM-QLNQDARYEGSI 64 L V+DLTV G +V VSF + G +L+GESGSGK++ + A+M L R GSI Sbjct: 10 LRVEDLTVWHGQQPLVGGVSFAVPVGGVLSLLGESGSGKSLLAQAIMGNLPASLRATGSI 69 Query: 65 LLDGQDVLKKNERQMQQVRGNDVAMIFQEPMTALNPLFTIGNQIAEVLML---------- 114 L GQ + R Q G +A++ QEP AL+P T+ Q+AE L Sbjct: 70 SLAGQYSDAADGRSRQSGWGRRIALLPQEPWLALDPTMTVARQVAETYELVSQSAPDQQN 129 Query: 115 -HEGLNARDAATRAVALLEKTGIPEPARRALSYPHELSGGQRQRAMIAMALACKPKLLIA 173 AA A L G+ A + YP +SGG QR A L+I Sbjct: 130 ESLRRARSQAAASARRALASLGLEAAADK---YPFMISGGMAQRVAFLATHAAGAPLMII 186 Query: 174 DEPTTALDVTIQVQILALLNQLQREENMAVLIISHDLNLVRHFADRVGVMEKGKLVESAS 233 DEPT LDV + ++LALL Q + E +++L I+HD+ L R ++ V++ G +VE S Sbjct: 187 DEPTKGLDVDRRGEVLALL-QAAQAEGVSLLCITHDVWLARALGGQLAVLQDGAMVEQGS 245 Query: 234 VAELFANPQQPYTRKLLQSRPQRNAADVP------AQAPVVLQAEKVRCTYHIKQGWFAK 287 L A P+ YTR+LL + P +P A A V+ + ++ ++ +Q FA Sbjct: 246 AEALLAQPRHAYTRRLLGADP--ACWPLPEVRTPRADAAVIAELREISKSFG-EQALFA- 301 Query: 288 RAFHAVDGIDLQLRRGETIGIVGESGSGKSTLGMALLRLSAASVAGSIRFEGTPISERSS 347 G+ +L GE + + G SGSGK++LG LL L +R G P Sbjct: 302 -------GVSARLHAGEVVAVSGPSGSGKTSLGNILLGLLQPDSGQVLRAPGLP------ 348 Query: 348 RELRPLRARMQVVFQDPFASLSP----RRTVEQIVGEGLALHHPGKTPEQQREAIVSALE 403 R Q ++QDP A+ +P RR+++ +V LH P Q+ EA+ LE Sbjct: 349 ------RTAFQKIYQDPAAAFAPSIPLRRSLQDLV----RLH---GLPWQELEAL---LE 392 Query: 404 EVGLTAAVLERYPHEFSGGQRQRIAIARALVLQPELLLLDEPTSALDVTVQQQVLQLLAD 463 + + A+L+R P + SGG+ QRIA+AR L+++P L+ DEPTS LD QQ+V+ LL + Sbjct: 393 RMRIAPALLDRLPRQVSGGELQRIALARVLLMKPALIFADEPTSRLDPLTQQEVMALLVE 452 Query: 464 LQRRHGLAYLFITHDLAVVQAMAHQVIVMKDGKVVESGPA 503 R G A L +THD +V+ +A + + + +S PA Sbjct: 453 QARAVGSAVLLVTHDADIVRCVADRRLTLSPAGQSQSQPA 492 Score = 112 bits (279), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 88/253 (34%), Positives = 134/253 (52%), Gaps = 21/253 (8%) Query: 284 WFAKRAFHAVDGIDLQLRRGETIGIVGESGSGKSTLGMALLRLSAASV--AGSIRFEG-- 339 W ++ V G+ + G + ++GESGSGKS L A++ AS+ GSI G Sbjct: 18 WHGQQPL--VGGVSFAVPVGGVLSLLGESGSGKSLLAQAIMGNLPASLRATGSISLAGQY 75 Query: 340 TPISERSSRELRPLRARMQVVFQDPFASLSPRRTVEQIVGEGLALHHPGKTPEQQREAIV 399 + ++ SR+ R R+ ++ Q+P+ +L P TV + V E L P+QQ E++ Sbjct: 76 SDAADGRSRQSGWGR-RIALLPQEPWLALDPTMTVARQVAETYELVSQ-SAPDQQNESLR 133 Query: 400 SALEEV-----------GLTAAVLERYPHEFSGGQRQRIAIARALVLQPELLLLDEPTSA 448 A + GL AA ++YP SGG QR+A L+++DEPT Sbjct: 134 RARSQAAASARRALASLGLEAAA-DKYPFMISGGMAQRVAFLATHAAGAPLMIIDEPTKG 192 Query: 449 LDVTVQQQVLQLLADLQRRHGLAYLFITHDLAVVQAMAHQVIVMKDGKVVESGPAEQVLK 508 LDV + +VL LL Q G++ L ITHD+ + +A+ Q+ V++DG +VE G AE +L Sbjct: 193 LDVDRRGEVLALLQAAQA-EGVSLLCITHDVWLARALGGQLAVLQDGAMVEQGSAEALLA 251 Query: 509 QPQQEYTRRLVAA 521 QP+ YTRRL+ A Sbjct: 252 QPRHAYTRRLLGA 264 Database: BlastDatabases/689/689 Posted date: Apr 10, 2011 12:15 AM Number of letters in database: 1,619,870 Number of sequences in database: 4735 Lambda K H 0.319 0.133 0.366 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 4735 Number of Hits to DB: 1,472,273 Number of extensions: 57708 Number of successful extensions: 1008 Number of sequences better than 1.0e-08: 131 Number of HSP's gapped: 623 Number of HSP's successfully gapped: 255 Length of query: 529 Length of database: 1,619,870 Length adjustment: 90 Effective length of query: 439 Effective length of database: 1,193,720 Effective search space: 524043080 Effective search space used: 524043080 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 133 (55.8 bits)