BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0012.0132.p
         (393 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300314035|ref|YP_003778127.1| transmembrane patatin-like phos...   267   1e-72
gi|300312580|ref|YP_003776672.1| FabD/lysophospholipase-like est...    85   1e-17

>gi|300314035|ref|YP_003778127.1| transmembrane patatin-like
           phospholipase [Herbaspirillum seropedicae SmR1]
          Length = 395

 Score =  267 bits (682), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 141/365 (38%), Positives = 213/365 (58%), Gaps = 25/365 (6%)

Query: 12  PSGKGRSAFECIA------LVLQGGGALGSYQAGVYEALAEAEVHPDWIAGISIGAINSA 65
           PSG+ ++A   +A      LVLQGGGALG+YQAGVY+AL E +  PDW+ G SIGAIN+A
Sbjct: 10  PSGRRKAAAAPVAEKPRVALVLQGGGALGAYQAGVYQALHEHDFTPDWVVGTSIGAINAA 69

Query: 66  IIAGNAPQDRVAKLKGFWDCITANPVLDMAVLSEVHGPHGDFSRGLFNQISAGMALFKGA 125
           +IAGN  + R+ +L+ FW+ +    +LD+  + +   P          +++      +G 
Sbjct: 70  LIAGNPRETRIERLREFWETVAHPDLLDLRTVPDTLRPWA-------TRLTTMDTFLRGT 122

Query: 126 AGFFEPRRPSPFFHPNGSLG------ATSFYDTSALKGTLERFIDFDRINSRE-TRLSVG 178
            GFF PR  + F     +LG        SFY T+ L+ TL R +DFD +N +   R++V 
Sbjct: 123 PGFFRPRPLNAF-----ALGLPVPPEEASFYSTAELEQTLSRLVDFDYLNGQSGIRMTVS 177

Query: 179 AVNVRTGNFTYFDTETHLIRPEHIMASGSLPPGFPATEIDGEFYWDGGLISNTPLQWVAD 238
           AV V  G    FD+    + P+H++ASG+LPPGF    ++GE YWDGGL SNTPL+ V +
Sbjct: 178 AVKVSCGTLVNFDSREQALGPQHVLASGALPPGFAPVRVEGELYWDGGLYSNTPLEAVLN 237

Query: 239 GPTRQDTLAFQVDLWSAEGNLPGNLVDVTTRQKDIQYSSRTRSATDHFKRVQRVRGALAN 298
              R + +   VDLW A+G  P  L +V TR+KD+ ++SR++   D + +  R+R A  +
Sbjct: 238 DTPRTNLVCLMVDLWHADGPEPRTLEEVVTREKDVTFASRSQRHIDAYLQQYRLRRAAHD 297

Query: 299 LLQKLPRQLQDMEGMELLREVADHKAYSIVHLIYRSRQYESHSKDYEFSRLTMQEHWQAG 358
           L Q+LPR+L   +  +++ E+       IV L Y  R +   SKD  F+R +++  W+ G
Sbjct: 298 LYQRLPRELLTQQDRQMMAELDADTTIHIVRLAYAGRDWNMASKDVNFARGSVRWRWEQG 357

Query: 359 YEDAV 363
           Y+DA+
Sbjct: 358 YQDAL 362


>gi|300312580|ref|YP_003776672.1| FabD/lysophospholipase-like
           esterase [Herbaspirillum seropedicae SmR1]
          Length = 338

 Score = 84.7 bits (208), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 74/264 (28%), Positives = 116/264 (43%), Gaps = 31/264 (11%)

Query: 21  ECIALVLQGGGALGSYQAGVYEALAE-AEVHPDWIAGISIGAINSAIIAGNAPQD----R 75
           + I+L LQGGG+ G++  GV + L E   +  + I+G S GA+N+ ++A    QD     
Sbjct: 4   KIISLALQGGGSHGAFTWGVLDRLLEDGRLGFEGISGASAGAMNAVVLAQGYVQDGREGA 63

Query: 76  VAKLKGFWDCITANPVLDMAVLSEVHGPHGDFSRGLFNQISA-GMALFKGAAGFFEPRRP 134
            A L+ FW  ++    LD          + + +  + N     GM        FF P + 
Sbjct: 64  RAALERFWTALSTGAPLDYI--------NAEGAPVIANPTPMPGMQALLAMTRFFSPTQL 115

Query: 135 SPFFHPNGSLGATSFYDTSALKGTLERFIDFDRIN-SRETRLSVGAVNVRTGNFTYFDTE 193
           +P              D + L+  L   +DFDR+   RE +L + A  V TG    F   
Sbjct: 116 NPL-------------DINPLRDILLEQVDFDRLRRQRELKLFIAATQVSTGTLKIFRNA 162

Query: 194 THLIRPEHIMASGSLPPGFPATEIDGEFYWDGGLISNTPLQWVADGPTRQDTLAFQVDLW 253
              +  E ++AS  LP      EI+GE YWDGGL +N P+  +      +D +   +   
Sbjct: 163 D--LSVEALLASACLPSLHRPIEIEGEAYWDGGLTANPPIFPLLHACAARDVMVVLLH-P 219

Query: 254 SAEGNLPGNLVDVTTRQKDIQYSS 277
           S     P +  D+  R  +I +SS
Sbjct: 220 SRRAGTPTSTHDIGQRLSEISFSS 243


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.319    0.135    0.406 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 1,242,518
Number of extensions: 52660
Number of successful extensions: 136
Number of sequences better than 1.0e-08: 2
Number of HSP's gapped: 133
Number of HSP's successfully gapped: 2
Length of query: 393
Length of database: 1,619,870
Length adjustment: 87
Effective length of query: 306
Effective length of database: 1,207,925
Effective search space: 369625050
Effective search space used: 369625050
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 131 (55.1 bits)