BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0011.0020.p (700 letters) Database: BlastDatabases/689/689 4735 sequences; 1,619,870 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|300309529|ref|YP_003773621.1| TonB dependent ferrisiderophore... 596 e-171 gi|300310762|ref|YP_003774854.1| outer membrane ferric sideropho... 304 2e-83 gi|300312681|ref|YP_003776773.1| TonB-dependent siderophore rece... 280 3e-76 gi|300310859|ref|YP_003774951.1| TonB-dependent siderophore rece... 252 9e-68 gi|300311660|ref|YP_003775752.1| TonB-dependent receptor protein... 236 4e-63 >gi|300309529|ref|YP_003773621.1| TonB dependent ferrisiderophore receptor protein [Herbaspirillum seropedicae SmR1] Length = 704 Score = 596 bits (1536), Expect = e-171, Method: Compositional matrix adjust. Identities = 341/701 (48%), Positives = 442/701 (63%), Gaps = 18/701 (2%) Query: 6 CTLSALLALAFDSYAQQVQTNALPEVTVKATADDNSGYRPKNSSAATKIDVPLRDVPQTV 65 C+LS L L + AQQ T ALP + V A N GY + + TK + PLRDVPQT+ Sbjct: 16 CSLSPLAILP--ACAQQ-DTTALPAIEVSG-ARANDGYVAPTAVSGTKSEAPLRDVPQTI 71 Query: 66 NTVTKQVMRDQNALSLQDALQNVAGLSFSLGDAQRDQVIIRGFSAITDQFIDGVRDDALY 125 N V QV+RDQNA SLQD L+NV GL S GD QRDQV IRGF+AI DQF+DG RDDALY Sbjct: 72 NVVPAQVIRDQNASSLQDVLKNVPGLGLSTGDGQRDQVFIRGFTAIGDQFVDGFRDDALY 131 Query: 126 FRDLSNVERVEVLKGPASVLYGRGSAGGIVNRVTKKPSEDPVSEIGLTVGSEGQKRSEFD 185 FRDLSNVE VEV+KGPA+VLYGRGS+GG++NRVTKKP D VS++ T S +R+E D Sbjct: 132 FRDLSNVESVEVIKGPAAVLYGRGSSGGLINRVTKKPGVD-VSDVSFTANSTAGRRAELD 190 Query: 186 VGRNSADGTLLFRLTGAVEDSSSFRNQYFLERQALSPSLTYKPDAQTSFTAQFNYLHDRR 245 +GR + +G L +RLTGAVE SFR Q F++R A++PS+ + A T Q +YL DRR Sbjct: 191 LGR-AGEGALSWRLTGAVERGDSFRAQQFIDRTAIAPSVALRFSADTKLLLQMDYLEDRR 249 Query: 246 LADQGIPSYRGRPADVPIATYYGAANGRDRAFVQSEVKDATFTLDHKFSEKLAWRSVLRT 305 + D GIPSYRGRP DV T YGA N RD FVQS V T T H+F+++ ++R+ LR Sbjct: 250 MMDFGIPSYRGRPVDVDPGTTYGARNARDADFVQSRVASTTATFTHRFNDEFSFRNGLRY 309 Query: 306 YDFDLDRNYTTISRVTQTANPTVTIAQAHRQRAERGLFWQNELTQKLQLAGMHHELLYGV 365 YD+ L+RN T V + A T T+ A R E G F Q+ELTQKLQL + HE+LYG+ Sbjct: 310 YDYHLNRNNTNGGTVNE-ATATTTLNHAKLVRDENGWFNQSELTQKLQLGSIRHEILYGL 368 Query: 366 EYSWQNKTDWQVTR-NNAATYSLFNPVLANLSPIAANAVPNINAETRINTLATYVQDLIS 424 E Q+K Q + N S+FNPVL + P N P + T +T ATY+QD +S Sbjct: 369 ELGSQSKDASQASGVVNFPGVSIFNPVLPVVDPNRLNP-PTLTYGT-YDTFATYLQDSLS 426 Query: 425 LTPQWKLLAGLRYERL-SQDRDDRVAKSS---LNRVDTPLSPRVGLVYQPDERTSLYAGY 480 L+ QWK L GLRY+R Q R +A S L R DT +SPR GLV+QP S Y + Sbjct: 427 LSEQWKALVGLRYDRYRQQSRILNLANGSTADLQRTDTAVSPRAGLVWQPSLTQSYYLSW 486 Query: 481 SRSFQPLADSFVFYGNSAQLEPTKTESKEVGIKYEL-NDKTSLTAALFEMTQNNIQVADP 539 SRSFQP +SF N+A L P +T + E G KY+ + S T ++F + ++NI+ A P Sbjct: 487 SRSFQPSGESFALATNNADLAPEQTRNTEAGAKYDFWEGRASATVSVFRLERDNIKSALP 546 Query: 540 TRPGFAINVGQQRTRGVELSASGELAPHWNLIAGYAYMNGLIVQSSGLTSAGTPFQGNVS 599 G I VG+QRT G ELS S +L W L+AGYA++N +I +SS + G PF+G + Sbjct: 547 N--GVVIPVGKQRTDGAELSFSADLKQGWKLLAGYAWLNAVITESSSFDN-GVPFKGKNA 603 Query: 600 SLTPRHTFNLWLKRDLPDGYWVAAGARAESARFASSDNLTVLPGYAVINLGAGYVAEKFD 659 +LTPRH+ NLWL R+L +G V GA A ARFA+ N LPGY ++ A Y K++ Sbjct: 604 TLTPRHSGNLWLTRELGEGLVVGGGANAVGARFANPGNTVTLPGYVTVDAMAAYRTSKYE 663 Query: 660 VTLSLKNLLDRSYFISAHSAANDYNMPGEPRSLLVSTRYRF 700 V L++ NL + Y IS H + +MPG PR++ ++ RY Sbjct: 664 VQLNIGNLFNTGYIISGHGTNPNLSMPGAPRNVALTLRYHM 704 >gi|300310762|ref|YP_003774854.1| outer membrane ferric siderophore receptor protein [Herbaspirillum seropedicae SmR1] Length = 717 Score = 304 bits (778), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 223/680 (32%), Positives = 342/680 (50%), Gaps = 48/680 (7%) Query: 44 RPKNSSAATKIDVPLRDVPQTVNTVTKQVMRDQNALSLQDALQNVAGLSFSLGDAQRDQV 103 R + AT+ +VPQ++ +V+ + + A +L AL V G+S S+ D + D Sbjct: 63 RARRVGTATRSAADPMEVPQSIQSVSVEQVSVYGARTLAGALLGVPGIS-SISDTRFDAF 121 Query: 104 IIRGFSAITDQFIDGVRDDALYFRDLSNVERVEVLKGPASVLYGRGSAGGIVNRVTKKPS 163 IRGFS+ D +DG+RDD Y R L N+ERVEVL+GPASVLYGRGS GG++NR++K+P Sbjct: 122 RIRGFSSANDLLLDGMRDDPQYVRGLGNIERVEVLRGPASVLYGRGSGGGVINRISKQPG 181 Query: 164 EDPVSEIGLTVGSEGQKRSEFDVGRNSADGTLLFRLTGAVEDSSSFRNQYFLERQALSPS 223 +D S+ L++GS G + D R A L R+ E + SFR+ RQ +P+ Sbjct: 182 QDVASQATLSLGSAGLLGAALDWNRPLAPHWAL-RINTGREHAGSFRDTVNGTRQYFAPA 240 Query: 224 LTYKPDAQTSFTAQFNYLHDRRLADQGIP-----SYRGRPADVPIAT-----YYGAANGR 273 L ++ + S+ Q Y R+ D+GIP + G P + + ++GAA GR Sbjct: 241 LKWE-SGRDSWLLQAEYDEYERVPDRGIPGRAIATANGEPTAYALPSAGHEQFFGAA-GR 298 Query: 274 DRAFVQSEVKDATFTLDHKFSEKLAWRSVLRTYDFDLDRNYTTISRVTQTANPTVTIAQA 333 D ++ TL S+ R L D + + + T +++ Q+A + + + Sbjct: 299 D--VIRDIHMSLRSTLTRALSQDWTLRHALALMDLNSNFDNTFVTQAYQSA--PLDLDRV 354 Query: 334 HRQRAERGLFWQNELTQKLQLAGM--HHELLYGVEYSWQNKTDWQVTRNNAATYSLFNPV 391 R R ++ L Q + L+L G H+LL GVE+SWQ + +S+ P Sbjct: 355 QRTRYQQNLQ-QRSVQNNLELLGQLGAHDLLLGVEHSWQKR--------EPRLWSVAAPA 405 Query: 392 LANLSPIAANAVPNINAETRIN-----TLATYVQDLISLTPQWKLLAGLRYERLSQDRDD 446 ++ ++P + ++N L YVQD I+L WK+LAGLR++R D + Sbjct: 406 VSAVTPENTRNGDDPTTPFQMNYHKASNLGLYVQDKITLAAHWKMLAGLRWDRFEVDSRN 465 Query: 447 RVAKSSLNRVDTPLSPRVGLVYQPDERTSLYAGYSRSFQPLADSFVFY-----GNSAQLE 501 R R LSPR+G+V++ Y +S++F P+ + GN L+ Sbjct: 466 RRNGVRSERTAHALSPRIGVVWEALPGQHAYLSWSKNFAPVGGDVIGITPDARGNFNDLK 525 Query: 502 PTKTESKEVGIKYE-LNDKTSLTAALFEMTQNNIQVADPTRPGFAINVGQQRTRGVELSA 560 P + E GIK E L+ + S T A F++ N VADP RPGF G +R RG+ELS Sbjct: 526 PQFSRQVEAGIKSEWLDRRLSTTLAWFQLELFNRNVADPVRPGFFEQSGLERNRGIELSV 585 Query: 561 SGELAPHWNLIAGYAYMNGLIVQSSGLTSAGTPFQGNVSSLTPRHTFNLWLKRDLPDGYW 620 GELA W + AG+A +QS+ + A F G +S +L+L G++ Sbjct: 586 EGELAAPWFVRAGWA------IQSAKIVQAEPKFVGKRASGVSGRGGSLFLSYAPTLGWF 639 Query: 621 VAAGARAESARFASSDNLTVLPGYAVINLGAGYVAEKFDVTLSLKNLLDRSYFISAHSAA 680 G E AR+A DNL LP Y + GY ++ + TL++ NL +R Y+ SA + Sbjct: 640 AELGLTVEGARYADRDNLLELPAYTRWDGKMGYRLDEAEFTLAVTNLANRRYYESATGLS 699 Query: 681 NDYNMPGEPRSLLVSTRYRF 700 PG PR+LL++ Y+F Sbjct: 700 Q--VRPGAPRALLLTAAYKF 717 >gi|300312681|ref|YP_003776773.1| TonB-dependent siderophore receptor protein [Herbaspirillum seropedicae SmR1] Length = 738 Score = 280 bits (715), Expect = 3e-76, Method: Compositional matrix adjust. Identities = 221/721 (30%), Positives = 334/721 (46%), Gaps = 72/721 (9%) Query: 28 LPEVTVKATADDNSGYRPKNSSAATKIDVPLRDVPQTVNTVTKQVMRDQNALSLQDALQN 87 L VTV+ DD + +A TK+ LRDVPQ+V V K M+ Q A SL DAL+N Sbjct: 42 LAPVTVQGQRDDFA----STGTALTKLPADLRDVPQSVTVVNKAQMQSQGASSLSDALRN 97 Query: 88 VAGLSFSLGDAQRDQVI----IRGFSAITDQFIDGVRDDALYFRDLSNVERVEVLKGPAS 143 V+G++ LG A+ Q+ + GFSA TD ++DG RD Y+RD ++ VEVL GP+S Sbjct: 98 VSGIT--LGGAEGGQIGNNINLNGFSARTDIYLDGFRDRGQYYRDTFAIDEVEVLMGPSS 155 Query: 144 VLYGRGSAGGIVNRVTKKPSEDPVSEIGLTVGSEGQKRSEFDVGRNSADGTLLFRLTGAV 203 +L+GRGS GGI+N+V+KK + +EI ++ + G RS DV R +D + L A Sbjct: 156 MLFGRGSTGGIINQVSKKANLKAATEISGSITTNGLVRSTVDVNRPLSDTSALRIEAMAQ 215 Query: 204 EDSSSFRNQYFLERQALSPSLTYKPDAQTSFTAQFNYLHDRRLADQGIPSYRGRPADVPI 263 ++S R Q ++ L+ S + T T H++ D G+P G PA+V Sbjct: 216 NGAASTRKQTDVQDFGLAGSYVWGIGTPTEITLSALLQHNQDQPDYGLPPLNGHPANVGR 275 Query: 264 ATYYGAANGRDRAFVQSEVKDATFTLDHKFSEKLAWRSVLRTYDFDLDRNYT---TISRV 320 T YG + DR +V + HK + + R+ + D T TI V Sbjct: 276 DTAYGLNS--DRTI--QDVASFNVGVKHKIAPDVTLRNQTQFNYVHTDAVETAPNTIGTV 331 Query: 321 -----TQTANPTVTI--------AQAH-RQRAERGLFWQNELTQKLQLAGMHHELLYGVE 366 TQ N + + Q+H R + +F Q ELT K + H+ + GVE Sbjct: 332 SGAGFTQLVNASSNLPLSSLFVRGQSHDRVITDYSIFNQTELTAKFATGSIKHDAVVGVE 391 Query: 367 YSWQNKTDWQVTRNNAATYSLFNPVLANLSPIAANAVPNIN-----------------AE 409 + RN + + N A + + VP +N A Sbjct: 392 VGHDGYDNQNYYRNGSCNGTALNANGATTGYV--DCVPLLNPSYSAAGSSVSSSTGNRAG 449 Query: 410 TRINTLATYVQDLISLTPQWKLLAGLRYER--------LSQDRDDRVAKSSLNRVDTPLS 461 NT+A YV D + L PQ+KL+ GLRY+R ++ R A ++N LS Sbjct: 450 GSANTVAAYVGDTVELVPQFKLVGGLRYDRYIASITNSIASARTPAAASQTINF----LS 505 Query: 462 PRVGLVYQPDERTSLYAGYSRSFQPLADSFVFYGNSAQLEPTKTESKEVGIKYELNDKTS 521 R G ++QP + Y Y SF P + L+P K S E+G K++L D + Sbjct: 506 LRSGAIWQPTSAQAYYVSYGTSFNPSLEQLTGTQGQQNLDPEKNRSYELGGKWDLADGLA 565 Query: 522 LTAALFEMTQNNI--QVADPTRPGFAINVGQQRTRGVELSASGELAPHWNLIAGYAYMNG 579 LTAA F++T++N QVA G G+ R G A+G + W + A Y Y+ Sbjct: 566 LTAAAFQITKDNARSQVA----TGVYALAGKVRVNGARAGATGHITREWQVAANYTYLGA 621 Query: 580 LIVQSSGLTSAGTPFQGNVSSLTPRHTFNLWLKRDLPDGYWVAAGARAESARFASSDNLT 639 +++ +AG G V TP+HT W DL + + GA S R+A + N Sbjct: 622 KVLEG----AAGDNSVGKVPVNTPKHTLTTWTTYDLAPHWQIGGGASYMSQRYADAPNTV 677 Query: 640 VLPGYAVINLGAGYVAEKFDVTLSLKNLLDRSYFISAHSAANDYNMPGEPRSLLVSTRYR 699 + GY + Y + +D+ L+L NL ++ Y+ + + ++PG R+ L+S YR Sbjct: 678 QVGGYTRYDAMLAYTTKAYDIRLNLYNLSNKMYYDALIQSDGGRSVPGSGRTALLSLTYR 737 Query: 700 F 700 Sbjct: 738 M 738 >gi|300310859|ref|YP_003774951.1| TonB-dependent siderophore receptor protein [Herbaspirillum seropedicae SmR1] Length = 705 Score = 252 bits (643), Expect = 9e-68, Method: Compositional matrix adjust. Identities = 203/703 (28%), Positives = 342/703 (48%), Gaps = 55/703 (7%) Query: 24 QTNALPEVTVKATADDNSGYRPKNSSAATKIDVPLRDVPQTVNTVTKQVMRDQNALSLQD 83 Q L E+ V + YR ++S+AT+ + PL+++PQ+V V++Q++ D A L D Sbjct: 32 QEGDLGEIVVTGQGERQQ-YRQSSTSSATRTETPLQELPQSVQVVSRQLIDDLAATRLDD 90 Query: 84 ALQNVAGLSF--SLGDAQRDQVIIRGFSAITDQFID----GVRDDALYF--RDLSNVERV 135 L V+G++ + G D IRGFS + ++ G + Y RD++NVE V Sbjct: 91 VLLYVSGVARQNNFGGLW-DNYSIRGFSGSENGGMNILWNGFASNRGYAPPRDMANVESV 149 Query: 136 EVLKGPASVLYGRGSAGGIVNRVTKKPSEDPVSEIGLTVGSEGQKRSEFDVGRNSADGTL 195 + LKGPA+ LYG GG +N VTKKP + + L++GS RS D + T+ Sbjct: 150 DFLKGPAAALYGNSEPGGTINVVTKKPQFKSANALDLSIGSNDAYRSAVD-STGALSSTV 208 Query: 196 LFRLTGAVEDSSSFRNQYFLERQALSPSLTYKPDAQTSFTAQFNYLHDRRLADQGIPSYR 255 +RL A+E S R+Q ER+ +P+ T+ T + +L + D+GI + Sbjct: 209 AYRLNAAMEHKGSMRDQVRSEREFFAPAFTWLLTENTILNYEGEFLRQKAPLDRGIVAVN 268 Query: 256 GRPADVPIATYYGAANGRDRAFVQSEVKDATFTLDHKFSEKLAWRSVLRTYDFDLDRNYT 315 G +P++ + G N D ++ + ++ TL+ + +E R+ + + LD Y+ Sbjct: 269 GNAGVLPVSRFLGEPNDGD---IKMQNQNHLLTLEQRLNENWHLRTGIFHKEGSLD-GYS 324 Query: 316 TISRVTQTANPTVTIAQAHRQRAERGLFW-----QNELTQKLQLAGMHHELLYGVEYSW- 369 T + Q N T+ RQR R W Q E+ K AG+ HE+L G E W Sbjct: 325 TEAFALQADNATL-----RRQRRYRDYSWHDTSLQAEIGGKFATAGVGHEVLVGTEVDWL 379 Query: 370 -QNKTDWQVTRNNAATYS--LFNPVLANLSPIAANAVPNINAETRINTLAT--YVQDLIS 424 ++ ++ +N A Y+ ++NPV P P N +T ++T Y+QD +S Sbjct: 380 TLDQRMLRINPSNVAPYAVNIYNPVYGQAQP-----TPTANTDTSERQISTGLYLQDQLS 434 Query: 425 LTPQWKLLAGLRYERLSQDRDDRVAKSSLNRVDT-PLSPRVGLVYQPDERTSLYAGYSRS 483 L+ +W+LLAG+R + ++ + ++ R D SPR+GL Y S+Y S+S Sbjct: 435 LSERWRLLAGVRADAFRSTLNN-LRNGAVTRQDKHAYSPRLGLTYLLTPSWSVYVSASKS 493 Query: 484 FQPLADSFVFYGNSAQLEPTKTESKEVGIKYELNDKTS-LTAALFEMTQNNIQVADPTRP 542 F+P + S V GN+ P + + E G+K++ DK S T A+F++T+ N+ DP P Sbjct: 494 FRPNSGSDV-SGNA--FSPETSRAAEAGLKFQSEDKRSGATLAVFDITKQNVLTTDPANP 550 Query: 543 GFAINVGQQRTRGVELSASGELAPHWNLIAGYAYMNGLIVQSSGLTSAGTPFQGNVSSLT 602 F+I G+ R++GVEL A+ L HW + AY + + + + L P + ++ Sbjct: 551 NFSIAAGEVRSKGVELDANARLGHHWRVTGNLAYTDAYVSRDNTL-----PVGSRLVNI- 604 Query: 603 PRHTFNLWLKRDLPDG----YWVAAGARAESARFASSDNLTVLPGYAVIN-LGAGYVAEK 657 PR + +L + D Y V G R +LP Y L K Sbjct: 605 PRSSASLLAVFEDADAHGAPYGVGGGLNYVGRRTGDQAGSFMLPSYVTARALAYWQFTPK 664 Query: 658 FDVTLSLKNLLDRSYFISAHSAANDYNMPGEPRSLLVSTRYRF 700 ++L + NL ++ Y+ S++++ + MPG+ R+ ++ +F Sbjct: 665 MKLSLDVNNLFNKRYYSSSYNSL--WIMPGDERNATLALNIKF 705 >gi|300311660|ref|YP_003775752.1| TonB-dependent receptor protein [Herbaspirillum seropedicae SmR1] Length = 705 Score = 236 bits (602), Expect = 4e-63, Method: Compositional matrix adjust. Identities = 204/700 (29%), Positives = 332/700 (47%), Gaps = 52/700 (7%) Query: 28 LPEVTVKATADDNSG----YRPKNSSAATKIDVPLRDVPQTVNTVTKQVMRDQNALSLQD 83 LP+V +KA A+ +G Y K +++ATK D P+ +VPQ+V+ VT+ M + SL D Sbjct: 31 LPQVEIKADAETANGPVNGYVAKRTASATKTDTPVLEVPQSVSVVTRDEMDARGVTSLLD 90 Query: 84 ALQNVAGL-SFSLGDAQR--DQVIIRGF--SAITDQFIDGVRDDALYF----RDLSNVER 134 L+ + G S + G R + +RGF + +T F++G+R F + +ER Sbjct: 91 VLRYMPGANSETHGVDPRGYEYFNLRGFINAQVTSNFLNGLRQIPGGFGQFRTETYGMER 150 Query: 135 VEVLKGPASVLYGRGSAGGIVNRVTKKPSEDPVSEIGLTVGSEGQKRSEFDVGRNSADGT 194 +EVL+GP SV +G+ GG++NRV+K P D +E+G+ +GS +K+ D+ ++ DG Sbjct: 151 IEVLRGPGSVTFGQADPGGVINRVSKLPGMDIPNELGVDIGSFNRKQVVADLNGHTQDGE 210 Query: 195 LLFRLTGAVEDSSSFRNQYFL--------ERQALSPSLTYKPDAQTSFTAQFNYLHDRRL 246 L+R+ G DS+ NQY R L+PSLT++P A TS T +Y++DR Sbjct: 211 YLWRVVGLGLDSN---NQYKFNNGQSGDNNRFYLAPSLTWRPSASTSLTLMADYMNDRSG 267 Query: 247 ADQGIPSYRGRPADVPIATYYGAANGRDRAFVQSEVKDATFTLDHKFSEKLAWRSVLRTY 306 + + RP +V T G N DR ++ + +HKF +R R Sbjct: 268 SSRWTAV---RPGNVLTHTLIGDPN-FDRQ--SNDQWSFGYQFEHKFDNAWTFRQNFR-- 319 Query: 307 DFDLDRNYTTISRVTQTANPTVTIAQAHRQRAERGLFWQNELTQKLQLAGMHHELLYGVE 366 +L Y ++ T T + + + + L N+L +L+ H +L+G++ Sbjct: 320 QANLKSVYAALNPGTLTGSVLTRGTTVYNSQVDNTLV-DNQLEGRLKWGATEHTVLFGLD 378 Query: 367 YSWQNKTDWQVT-RNNAATYSLFNPVLANLSPIAANAVPNINAETRINTLATYVQDLISL 425 W D +V R A + ++ NPV P A N+ E +N Y QD I Sbjct: 379 --WSRMYDREVRYRGAAPSLNIDNPVYGVTIPAATTLFGNL--EENMNQTGLYAQDQIKF 434 Query: 426 TPQWKLLAGLRYERLSQDRDDRVAKSSLNRVDTPLSPRVGLVYQPDERTSLYAGYSRSFQ 485 + L G R++++ + + +++ D+ LS R+GL Y + Y Y+ SF Sbjct: 435 DQRLTLTLGGRWDKVKDETRNYFNRTTTRSDDSALSGRIGLSYLVTRDIAPYVSYATSFL 494 Query: 486 PLADSFVFYGNSAQLEPTKTESKEVGIKYELND-KTSLTAALFEMTQNNIQVADPTRPGF 544 P S N +PTK EVGIKY+ D KT TAALFE+T+ N+Q DP F Sbjct: 495 PQTGSDF---NGKPFDPTKARQAEVGIKYQPADGKTLFTAALFELTKTNVQTPDPAHTNF 551 Query: 545 AINVGQQRTRGVELSASGELAPHWNLIAGYAYMNGLIVQSSGLTSAGTPFQGNVSSLTPR 604 + G+ ++RG+EL A GE+ NL A Y Y + Q++ + G L PR Sbjct: 552 NVLSGEIKSRGLELEAKGEIVKGLNLSASYTYTDVKNTQNNTAS-----LLGKQPILVPR 606 Query: 605 HTFNLW----LKRDLPDGYWVAAGARAESARFASSDNLTVLPGYAVINLGAGYVAEKFDV 660 ++W ++ G + GAR + +A + N G V + Y ++ Sbjct: 607 QAASVWADYTVQGGPLAGAGIGGGARYTGSNYADAANTVKNGGVTVFDAVFHYNLNRWRY 666 Query: 661 TLSLKNLLDRSYFISAHSAANDYNMPGEPRSLLVSTRYRF 700 L++ N+ ++ Y S + R+ ++S RYR+ Sbjct: 667 ALNISNITNKEY-TSCLAEPTTTCFWAAERTAILSARYRW 705 Database: BlastDatabases/689/689 Posted date: Apr 10, 2011 12:15 AM Number of letters in database: 1,619,870 Number of sequences in database: 4735 Lambda K H 0.316 0.131 0.376 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 4735 Number of Hits to DB: 2,037,631 Number of extensions: 81834 Number of successful extensions: 356 Number of sequences better than 1.0e-08: 21 Number of HSP's gapped: 260 Number of HSP's successfully gapped: 26 Length of query: 700 Length of database: 1,619,870 Length adjustment: 92 Effective length of query: 608 Effective length of database: 1,184,250 Effective search space: 720024000 Effective search space used: 720024000 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 134 (56.2 bits)