BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0010.0012.p (1198 letters) Database: BlastDatabases/689/689 4735 sequences; 1,619,870 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|300312190|ref|YP_003776282.1| hemolysin-type calcium binding ... 787 0.0 gi|300312186|ref|YP_003776278.1| calcium binding secreted hemoly... 613 e-176 gi|300312185|ref|YP_003776277.1| calcium binding secreted hemoly... 597 e-171 gi|300311899|ref|YP_003775991.1| hemolysin-type calcium binding ... 531 e-151 >gi|300312190|ref|YP_003776282.1| hemolysin-type calcium binding protein [Herbaspirillum seropedicae SmR1] Length = 1139 Score = 787 bits (2033), Expect = 0.0, Method: Compositional matrix adjust. Identities = 398/715 (55%), Positives = 521/715 (72%), Gaps = 10/715 (1%) Query: 487 GNSTIGGSNRADLLLGGKGDDIINGFGGDDRIAGGDGNDQLSGDDGNDIIDGGAGNDSLF 546 G T+ G+ D L GG G+D + G G+DR+ G DG+DQL G +G D++DGGAG+D LF Sbjct: 432 GKDTLVGTTGDDTLWGGAGNDTLFGREGNDRLFGEDGDDQLLGGEGFDLLDGGAGDDQLF 491 Query: 547 GGWGNDRLFGGDGDDTIMGSDI---GSAIPAGFSSAPADDDVIFGGAGNDSLMGNGGNDQ 603 GG GND+++GGDGDDT+MGSD+ G +PAG + DDD++FGGAG D + G GNDQ Sbjct: 492 GGLGNDQMWGGDGDDTMMGSDVSNTGRPLPAGQT----DDDIMFGGAGKDGMFGGAGNDQ 547 Query: 604 LRGGTGSDKLFGSEGNDMLYGEDGDDRLTGGNGDDVLYGGDGNDYLLGSDVRANWLQPLP 663 + GG G D L+G+EG+D LYGE G+D + GG G+DV+ GGDG+D + G D+ W+QP Sbjct: 548 MWGGDGDDGLYGNEGDDKLYGEAGNDHIYGGKGNDVIQGGDGDDLIYGDDMEYFWMQP-- 605 Query: 664 ASVVGNDKLYGGAGDDTLITAGGDDYLDGGAGNDHMEGGDGNDTYVVSSPGDVVLERDNG 723 + G+D LYGGAG+D+L G+D LDGG+GND + GG G+DTYVV GD + E + Sbjct: 606 DTTGGDDLLYGGAGNDSLFGGSGNDVLDGGSGNDSLVGGLGDDTYVVDGAGDTIREDADQ 665 Query: 724 GTDTVLAGASYALPVFVEELHLLEGGNYNAGGNGLDNLILGNSLDNVIDGGAGADTMIGG 783 G DTV+A SY L +E+L L EGG +N GN DNLI GNS DN++DGG GADT++GG Sbjct: 666 GHDTVVASCSYTLGRNLEDLRLAEGGQFNGTGNAQDNLITGNSQDNILDGGRGADTLMGG 725 Query: 784 KGSDSYFIDNVGDKVVEQAGEGIDTVYARISTTLGANVENLVLMDATTPERATIDGQSVL 843 G+DSYF+D+V DKVVEQAGEG+DTV++RISTTLGAN+ENL L+D+ TP+ ++G+ +L Sbjct: 726 TGNDSYFVDDVNDKVVEQAGEGVDTVFSRISTTLGANLENLTLLDSATPQHEIVNGRDML 785 Query: 844 VYGAPHRYNLDYDQGGDIAGYDGTCGETSISNVLNMAGTPVAEPDVVRRAISRALCEPKN 903 VYG PH LDY QG +AGY GTCGETS+ N+ MAG V E V+RAI+ C Sbjct: 786 VYGYPHYAELDYSQGDAVAGYTGTCGETSVVNLCLMAGLAVTEAQAVKRAIANGWCVTSG 845 Query: 904 ANGMGGGMNQYNCSTLLDSYGIRNRVSNNFEPQGVVDAVKAGKAVILTVDSGRLWGAPDG 963 + +GG NQY+ LL SYGIR + ++ + +V +K G+ +++V++G+LW P Sbjct: 846 ESQLGGS-NQYDQVALLASYGIRAKAGYGYDEKALVKVLKEGRGALVSVNAGKLWDNPGA 904 Query: 964 DRFIHGDHYVTVTGVACDEATGVAKGIYIADSGRGNSSDMCRLLSMEEFANVANVYGANV 1023 + +G+H +TVTGV CD TG A+G +IADSGRG D CR LS +E VA+V + Sbjct: 905 VQLGNGNHVITVTGVVCDPGTGEAQGFFIADSGRGRPEDACRYLSKDELRKVADVTDGYM 964 Query: 1024 IYTKDPIKMIDANLNGSGNALDNELVGNRGNNILTGGRGDDTLVGQAGNDTYVFSRGDGR 1083 + T DPIK+ + NL+ +GN LDN + GNRG N++ GGRG+DTL+G AGNDTYVF+RGDG+ Sbjct: 965 VATVDPIKVPNENLDATGNELDNVITGNRGANVIRGGRGNDTLIGGAGNDTYVFARGDGQ 1024 Query: 1084 DLVVDNDATKGNLDTLQFSDIKQTNLWFKHVGNDLQIDVMGGQDQVTIKDWYVGGASGSD 1143 D++ D DAT+GN+DTLQ SD++QTNLWF GNDL+IDV+GG D++TIKDWY GG+SGSD Sbjct: 1025 DVIADQDATRGNIDTLQLSDLRQTNLWFSQSGNDLRIDVLGGNDRITIKDWYQGGSSGSD 1084 Query: 1144 NRIERIKTAEGNTLYDTDVEKLVQAMASFAPPAATQMEWNSGATSEGKVLLTVTH 1198 N IERI+TA+GNTLYD+DV+KLVQAMASFAPP A Q EW G TS+GKVLLTVTH Sbjct: 1085 NHIERIRTADGNTLYDSDVDKLVQAMASFAPPPALQSEWTPGQTSQGKVLLTVTH 1139 >gi|300312186|ref|YP_003776278.1| calcium binding secreted hemolysin protein [Herbaspirillum seropedicae SmR1] Length = 1080 Score = 613 bits (1581), Expect = e-176, Method: Compositional matrix adjust. Identities = 314/559 (56%), Positives = 392/559 (70%), Gaps = 19/559 (3%) Query: 642 GGDGNDYLLGSDVRANWLQPLPASVVGNDKLYGGAGDDTLITAGGDDYLDGGAGNDHMEG 701 G G+D LLGS G D L+GG G D L G+D LDGG G D + G Sbjct: 539 GTAGDDQLLGS--------------TGEDSLHGGDGKDWLFGFDGNDVLDGGLGADTLYG 584 Query: 702 GDGNDTYVVSSPGDVVLERDNGGTDTVLAGASYALPVFVEELHLLEGGNYNAGGNGLDNL 761 GDG+DTY+V+S D V+E NGG DTV+A S L VE+L L+EGGN N GN LDNL Sbjct: 585 GDGDDTYIVNSSDDRVVETINGGHDTVIASCSTILAANVEDLRLVEGGNLNGAGNTLDNL 644 Query: 762 ILGNSLDNVIDGGAGADTMIGGKGSDSYFIDNVGDKVVEQAGEGIDTVYARISTTLGANV 821 I+GN DN++DGG GADTMIGG G+DSYF+D+ GD+V E A EG+DTVY+RIS L ANV Sbjct: 645 IVGNGQDNILDGGVGADTMIGGLGNDSYFVDDAGDQVTEAADEGVDTVYSRISMRLAANV 704 Query: 822 ENLVLMDATTPERATIDGQSVLVYGAPHRYNLDYDQGGDIAGYDGTCGETSISNVLNMAG 881 ENL L+D TP R T++G++ L+YGAP Y+LDY QG + GYDGTCGETS+ NVL MA Sbjct: 705 ENLTLLDGGTPLRGTVEGKAALIYGAPKAYDLDYQQGNGVTGYDGTCGETSVVNVLRMAD 764 Query: 882 TPVAEPDVVRRAISRALC--EPKNANGMGGGMNQYNCSTLLDSYGIRNRVSNNFEPQGVV 939 V+E +VV+RAI + C + +A+ GG + + LL+SYG+R + ++ + Sbjct: 765 QWVSEKEVVQRAIDKKWCITDAPSASAKGGS-SALDQKRLLESYGLRAEYTLKYDQDKLA 823 Query: 940 DAVKAGKAVILTVDSGRLWGAPDGDRFIHGDHYVTVTGVACDEATGVAKGIYIADSGRGN 999 VK G+ V+++VDS RLW G F DH VTVTGVA G G YIADSGRG Sbjct: 824 ALVKEGRGVMVSVDSRRLWSGGKGLNFT--DHVVTVTGVAYAAEKGELIGFYIADSGRGL 881 Query: 1000 SSDMCRLLSMEEFANVANVYGANVIYTKDPIKMIDANLNGSGNALDNELVGNRGNNILTG 1059 + D R +S +E +A+V GA+++YT DPIK+ NL +GN LDN LVGNRG+N++TG Sbjct: 882 AEDATRYVSADELRAMADVRGASMVYTLDPIKLRQQNLEATGNELDNHLVGNRGDNLITG 941 Query: 1060 GRGDDTLVGQAGNDTYVFSRGDGRDLVVDNDATKGNLDTLQFSDIKQTNLWFKHVGNDLQ 1119 +G+DTLVGQAGNDTYVF +GDGRDLV D+DAT GN+DT++FSD +QTNLWF+ VG DLQ Sbjct: 942 AKGNDTLVGQAGNDTYVFGKGDGRDLVADHDATAGNIDTIKFSDARQTNLWFRQVGQDLQ 1001 Query: 1120 IDVMGGQDQVTIKDWYVGGASGSDNRIERIKTAEGNTLYDTDVEKLVQAMASFAPPAATQ 1179 IDV+G DQVT+KDWYVGG SG+DNRIERIKTA+G TLYD+DV++LVQAMASFAPP ATQ Sbjct: 1002 IDVLGTTDQVTVKDWYVGGDSGTDNRIERIKTADGKTLYDSDVDRLVQAMASFAPPPATQ 1061 Query: 1180 MEWNSGATSEGKVLLTVTH 1198 W G +G VLLTV H Sbjct: 1062 TSWRDGQQEKGAVLLTVNH 1080 Score = 143 bits (361), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 158/525 (30%), Positives = 229/525 (43%), Gaps = 92/525 (17%) Query: 159 ARAPATLAQTTAAP------AVPALVALSPVVPAPVAVQHPAPCPPLASTCPSLPAP--- 209 ++A AT A TT P A P + PV V V P ++S P+ P Sbjct: 219 SKADATPAVTTPKPTPAKADAAPTVAITKPVPAVAVDVAKPDSTSSVSSNAPASPVSKPA 278 Query: 210 -------------APVCVQTGQPAPVYVKVFLHDQVMLCPIDIFCPALMPLAPDSSPSPA 256 AP T PV V V PDS+ S + Sbjct: 279 AQPAAATPSKADAAPTVAITKPVPPVTVDV--------------------AKPDSTSSVS 318 Query: 257 PAPAPAPVITAAPAALPTSTLPPVA-AGPALSVTPAAPVVRAAPAAPVAPVQPASTAAVA 315 +P + PAA P ++ P A A P +++T AP+V V +P ST+ A Sbjct: 319 TNVPASPA--SKPAAQPAASTPSKADAAPTVAITKPAPIVT------VDVAKPDSTSTAA 370 Query: 316 AAAP---APALAMADASVRSSADPSNAPATYRQPGRLDPASFIARQACREGGASAAESKN 372 P PA D S P + P L P S I + + ES + Sbjct: 371 KDKPDTTKPAAGKQDLS-----KPEPGKSINLSPDSLLPISAINERPSKP----ELESTS 421 Query: 373 SVSDRSWRILDSKLQGVSAAQLAALDGDHDGQLSGTELSGLMVWSDLNQDGIAQAGEIDT 432 S + R ILD + +SAAQ+AALD +H+G+L EL+ L W+D N+D +AQA E+ + Sbjct: 422 SAAARRLHILDHNGKAMSAAQVAALDLNHNGKLEAGELADLKAWTDSNEDDLAQASELTS 481 Query: 433 LAEALQRVKF-DALRAADYGVFTAGNARFQAQAPDETPLPLSARDRALPTKTGGDGNSTI 491 L++AL+ + LRA DY ++T G Q LS + G + Sbjct: 482 LSDALKAAGLPNTLRATDYSIYTVGKGPRQEWNFKSLLATLSGQ---------GAFFFVL 532 Query: 492 GGSNRADLLLGGKGDDIINGFGGDDRIAGGDGNDQLSGDDGNDIIDGGAGNDSLFGGWGN 551 + +A G GDD + G G+D + GGDG D L G DGND++DGG G D+L+GG G+ Sbjct: 533 PATPQA----GTAGDDQLLGSTGEDSLHGGDGKDWLFGFDGNDVLDGGLGADTLYGGDGD 588 Query: 552 DRLFGGDGDDTIM-----GSDIGSAIPAGFSSAPADDDVI-----FGGAGN---DSLMGN 598 D DD ++ G D A + +A +D + GAGN + ++GN Sbjct: 589 DTYIVNSSDDRVVETINGGHDTVIASCSTILAANVEDLRLVEGGNLNGAGNTLDNLIVGN 648 Query: 599 GGNDQLRGGTGSDKLFGSEGNDMLYGEDGDDRLT--GGNGDDVLY 641 G ++ L GG G+D + G GND + +D D++T G D +Y Sbjct: 649 GQDNILDGGVGADTMIGGLGNDSYFVDDAGDQVTEAADEGVDTVY 693 Score = 101 bits (251), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 74/175 (42%), Positives = 91/175 (52%), Gaps = 22/175 (12%) Query: 597 GNGGNDQLRGGTGSDKLFGSEGNDMLYGEDGDDRLTGGNGDDVLYGGDGND-YLLGSD-- 653 G G+DQL G TG D L G +G D L+G DG+D L GG G D LYGGDG+D Y++ S Sbjct: 539 GTAGDDQLLGSTGEDSLHGGDGKDWLFGFDGNDVLDGGLGADTLYGGDGDDTYIVNSSDD 598 Query: 654 ------------VRANWLQPLPASVV-------GNDKLYGGAGDDTLITAGGDDYLDGGA 694 V A+ L A+V GN G D+ ++ G D+ LDGG Sbjct: 599 RVVETINGGHDTVIASCSTILAANVEDLRLVEGGNLNGAGNTLDNLIVGNGQDNILDGGV 658 Query: 695 GNDHMEGGDGNDTYVVSSPGDVVLERDNGGTDTVLAGASYALPVFVEELHLLEGG 749 G D M GG GND+Y V GD V E + G DTV + S L VE L LL+GG Sbjct: 659 GADTMIGGLGNDSYFVDDAGDQVTEAADEGVDTVYSRISMRLAANVENLTLLDGG 713 >gi|300312185|ref|YP_003776277.1| calcium binding secreted hemolysin protein [Herbaspirillum seropedicae SmR1] Length = 984 Score = 597 bits (1538), Expect = e-171, Method: Compositional matrix adjust. Identities = 317/589 (53%), Positives = 401/589 (68%), Gaps = 18/589 (3%) Query: 615 GSEGNDMLYGEDGDDRLTGGNGDDVLYGGDGNDYLLGSDVRANWLQPLPASVVGNDKLYG 674 G GND+L+ +G++ + G GDDV+YGGDG+D L+G A L ND LYG Sbjct: 409 GGAGNDVLFATNGEE-INGNGGDDVIYGGDGDDTLVGGTYSA-----LARGETDNDVLYG 462 Query: 675 GAGDDTLITAGGDDYLDGGAGNDHMEGGDGNDTYVVSSPGDVVLERDNGGTDTVLAGASY 734 GAG D+L G+D LDGG G+D M GG G+D YVV S GD V E + G DTVLAG S Sbjct: 463 GAGKDSLSGGVGNDLLDGGTGDDRMYGGAGDDIYVVDSAGDGVFENADAGRDTVLAGMST 522 Query: 735 ALPVFVEELHLLEGGNYNAGGNGLDNLILGNSLDNVIDGGAGADTMIGGKGSDSYFIDNV 794 L VE+L LLEGG+YN GN LDN + GNS DN++DG AGADTM+GG+G+D YF+DNV Sbjct: 523 TLGENVEDLRLLEGGSYNGTGNFLDNRLTGNSQDNILDGLAGADTMMGGQGNDRYFVDNV 582 Query: 795 GDKVVEQAGEGIDTVYARISTTLGANVENLVLMDATTPERATIDGQSVLVYGAPHRYNLD 854 GD+V+E+AGEGIDTVY+ +S TLGANVENL LMDA TP I GQ L+YG P Y +D Sbjct: 583 GDQVIEEAGEGIDTVYSTVSMTLGANVENLTLMDARTPVHGEIYGQDALIYGTPKSYLMD 642 Query: 855 YDQGGDIAGYDGTCGETSISNVLNMAGTPVAEPDVVRRAISRALC--EPKNANGMGGGMN 912 Y QG G+ GTCG TS++N+L MAG V E + ++RAI R C +P + GG+ Sbjct: 643 YRQGDARPGFLGTCGVTSVANMLTMAGVNVTEKETLQRAIDRDWCDSDPSLPITLRGGVT 702 Query: 913 QYNCSTLLDSYGIRNRVSNNFEPQGVVDAVKAGKAVILTVDSG---RLWGAPDGDRFIHG 969 + + L+ S+G+ V ++ +V +K G V L D+ + G G R G Sbjct: 703 CNDLAELMGSFGVAGEVDYRYDEARLVKLLKGGHVVTLCADAAVFRDMSGYLAGKRV--G 760 Query: 970 DHYVTVTGVACDEATGVAKGIYIADSGRGNSSDMCRLLSMEEFANVANVYGANVIYTKDP 1029 H V V+GVAC TG G YI DSG G S+M R LS+ + N+ + + + +IY+ DP Sbjct: 761 FHAVAVSGVACSAKTGEVLGFYITDSGPGRYSEMNRFLSVGDLRNM-DAHESALIYSVDP 819 Query: 1030 IKMIDANLNGSGNALDNELVGNRGNNILTGGRGDDTLVGQAGNDTYVFSRGDGRDLVVDN 1089 K++ + + +GN LDN LVGN+ NN+LTG +G+DTL GQAGNDTYVF +GDGRDLVVD Sbjct: 820 AKLLHRDSSATGNELDNILVGNQDNNLLTGAKGNDTLTGQAGNDTYVFGKGDGRDLVVDQ 879 Query: 1090 DATKGNLDTLQFSDIKQTNLWFKHVGNDLQIDVMGGQDQVTIKDWYVGGASGSDNRIERI 1149 DAT GN+DT++FSD +QTNLWF VG DLQIDV+G DQVT+KDWY +G+DNR+ERI Sbjct: 880 DATAGNIDTIKFSDARQTNLWFSQVGKDLQIDVLGSTDQVTVKDWY----AGADNRVERI 935 Query: 1150 KTAEGNTLYDTDVEKLVQAMASFAPPAATQMEWNSGATSEGKVLLTVTH 1198 KTA+G TLYD+DV+KLVQAMASF PPAATQ W G TS+GKVLLTVTH Sbjct: 936 KTADGKTLYDSDVDKLVQAMASFDPPAATQTSWTDGQTSKGKVLLTVTH 984 Score = 162 bits (411), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 213/712 (29%), Positives = 284/712 (39%), Gaps = 135/712 (18%) Query: 87 IRKAAGQTERVAVSPAKSLAPVLPSAAPAAVTQAAVSALPDRAAGTPVAKSGATAAAPPV 146 +R A Q P SL P LP AAPA+ P+R A P +P Sbjct: 40 VRMAPSQATLPPRRPRPSLLPTLP-AAPASRRIPRAQTPPNRVARLPRQP----LPSPQS 94 Query: 147 ASAIATASGSTSARAPATLAQTTAAPAVPALVALSPVVPAPVAVQHPAPCPPLASTCPSL 206 A++T+ A T +T A PA PVV + P +T PS Sbjct: 95 IFAVSTSKPLDPKSADTTKPSSTTATPAPA----KPVVEIAASTSKPLDPKNADTTKPS- 149 Query: 207 PAPAPVCVQTGQPAPVYVKVFLHDQVMLCPIDIFCPALMPLAPDSSPSPAPAPAPAPVIT 266 T PAP V DI PL P + + P+ A Sbjct: 150 -------STTATPAPAKPAV-----------DIAVSTSKPLDPKNVDTTKPSSTAATPAP 191 Query: 267 AAPAA-LPTSTLPPVAAGPALSVTPAAPVVRAAPAAPVAPV-----QPASTAAVAAAAPA 320 A PA + ST P+ A + P++ AP P + +P + +A P+ Sbjct: 192 AKPAVDIAASTSKPLDPKNADATKPSSTTATPAPVKPAVDIAASTSKPLDPKSTDSAKPS 251 Query: 321 PALAMADASVRSSADPSNAPATYRQPGRLDPASFIARQACREGGASAA-ESKNSVSDRSW 379 A + + A S+ P L P + R E A AA ES + R Sbjct: 252 STAASSAGGKAAVATASSGPQA------LTPEALTVRGTQVERWARAAPESAKAALIRKL 305 Query: 380 RILDSKLQGVSAAQLAALDGDHDGQLSGTELSGLMVWSDLNQDGIAQAGEIDTLAEALQR 439 LD + ++ AQLAALD + D L EL+GL W+DLN+DGIAQAGE+ +L A+ Sbjct: 306 HFLDGADKPLTEAQLAALDKNKDAHLDSDELAGLHAWTDLNEDGIAQAGELTSLPSAMTA 365 Query: 440 VKF-DALRAADYGVFTAGNARFQAQAPDETPLPLSARDRALPTKTGGDGNSTIGGSNRAD 498 LR ADY V+ GNA F+ P++ SA + GG GN D Sbjct: 366 AGLASGLRVADYQVYLRGNASFRT--PEQVQAMRSAAQASGKKNQGGAGN---------D 414 Query: 499 LLLGGKGDDIINGFGGDDRIAGGDGNDQL---------SGDDGNDIIDGGAGNDSLFGGW 549 +L G++I NG GGDD I GGDG+D L G+ ND++ GGAG DSL GG Sbjct: 415 VLFATNGEEI-NGNGGDDVIYGGDGDDTLVGGTYSALARGETDNDVLYGGAGKDSLSGGV 473 Query: 550 GNDRLFGGDGDDTIM---GSDIGSAIPAG---FSSAPADDDVIFGGAGNDSLMGNGGND- 602 GND L GG GDD + G DI AG F +A A D + AG + +G D Sbjct: 474 GNDLLDGGTGDDRMYGGAGDDIYVVDSAGDGVFENADAGRDTVL--AGMSTTLGENVEDL 531 Query: 603 -QLRGGTGSDKLFGSEGNDMLYGEDGDDRLTGGNGDDVLYGGDGNDYLLGSDVRANWLQP 661 L GG+ + GN + D+RLTG + D++L G G D ++G Sbjct: 532 RLLEGGS-----YNGTGNFL------DNRLTGNSQDNILDGLAGADTMMG---------- 570 Query: 662 LPASVVGNDKLYGGAGDDTLITAGGDDYLDGGAGNDHMEGGDGNDTYVVSSPGDVVLERD 721 G GND Y V + GD V+E Sbjct: 571 ----------------------------------------GQGNDRYFVDNVGDQVIEEA 590 Query: 722 NGGTDTVLAGASYALPVFVEELHLLEGGNYNAGG-NGLDNLILGNSLDNVID 772 G DTV + S L VE L L++ G G D LI G ++D Sbjct: 591 GEGIDTVYSTVSMTLGANVENLTLMDARTPVHGEIYGQDALIYGTPKSYLMD 642 >gi|300311899|ref|YP_003775991.1| hemolysin-type calcium binding protein [Herbaspirillum seropedicae SmR1] Length = 1974 Score = 531 bits (1367), Expect = e-151, Method: Compositional matrix adjust. Identities = 259/452 (57%), Positives = 328/452 (72%), Gaps = 2/452 (0%) Query: 748 GGNYNAGGNGLDNLILGNSLDNVIDGGAGADTMIGGKGSDSYFIDNVGDKVVEQAGEGID 807 G + N GN LDN + GN +N++DG G DTMIGGKG DSY++DN GDK+VEQAGEG+D Sbjct: 1524 GSSLNGIGNALDNRLTGNDQNNILDGMGGTDTMIGGKGDDSYYLDNAGDKIVEQAGEGVD 1583 Query: 808 TVYARISTTLGANVENLVLMDATTPERATIDGQSVLVYGAPHRYNLDYDQGGDIAGYDGT 867 TVYA STTL ANVENLVL+DA+ P+ A ++G +VLVYG P Y LDYDQGG++ GY GT Sbjct: 1584 TVYATASTTLAANVENLVLLDASKPQSAVVNGVNVLVYGMPRSYQLDYDQGGEVEGYWGT 1643 Query: 868 CGETSISNVLNMAGTPVAEPDVVRRAISRALCEPKNANG-MGGGMNQYNCSTLLDSYGIR 926 CGETS++NV M G V+E +VV+RAI LC+ + G ++ + LL +G Sbjct: 1644 CGETSVANVTLMGGHAVSEKEVVQRAIKENLCDTAAESADTRGATSEDDRQALLQDFGFA 1703 Query: 927 NRVSNNFEPQGVVDAVKAGKAVILTVDSGRLWGAPDGDRFIHGDHYVTVTGVACDEATGV 986 V + + V ++K GK VI++V + +LW + + DH +TVTGVAC A+G Sbjct: 1704 ASVEEELDLKAVAQSIKDGKGVIISVSASKLWDLHEENEDA-SDHAITVTGVACSAASGK 1762 Query: 987 AKGIYIADSGRGNSSDMCRLLSMEEFANVANVYGANVIYTKDPIKMIDANLNGSGNALDN 1046 G YIADSGRG +SDMCR +S++ NVYGA+ + T DPIK+ + NL+ +GN LDN Sbjct: 1763 IVGFYIADSGRGLASDMCRFVSLQRLRAATNVYGADTVTTDDPIKLRNQNLDATGNELDN 1822 Query: 1047 ELVGNRGNNILTGGRGDDTLVGQAGNDTYVFSRGDGRDLVVDNDATKGNLDTLQFSDIKQ 1106 LVGNRGNN LTGG+G+D L+G AGNDTY F++GDG+D++ D+DATKGNLDTL FSD+KQ Sbjct: 1823 ILVGNRGNNALTGGKGNDLLIGGAGNDTYAFAKGDGQDVLYDHDATKGNLDTLSFSDVKQ 1882 Query: 1107 TNLWFKHVGNDLQIDVMGGQDQVTIKDWYVGGASGSDNRIERIKTAEGNTLYDTDVEKLV 1166 TNLW GNDL+IDV+G DQV +KDWYVGG SGSDN +ERIKTA+G TLYD+DV+KLV Sbjct: 1883 TNLWLSKAGNDLRIDVLGTTDQVLVKDWYVGGDSGSDNHVERIKTADGKTLYDSDVDKLV 1942 Query: 1167 QAMASFAPPAATQMEWNSGATSEGKVLLTVTH 1198 QAMASFAPPAATQ W A GKVLLT++H Sbjct: 1943 QAMASFAPPAATQTSWPETAGGNGKVLLTISH 1974 Score = 520 bits (1338), Expect = e-148, Method: Compositional matrix adjust. Identities = 253/450 (56%), Positives = 321/450 (71%), Gaps = 2/450 (0%) Query: 750 NYNAGGNGLDNLILGNSLDNVIDGGAGADTMIGGKGSDSYFIDNVGDKVVEQAGEGIDTV 809 + N GN L N I GN DN++DG AGADT+ GGKG+DSY++D+ GDKV+E+AGEG+DTV Sbjct: 693 HLNGIGNALANRITGNDRDNILDGMAGADTLTGGKGNDSYYVDDAGDKVIEKAGEGLDTV 752 Query: 810 YARISTTLGANVENLVLMDATTPERATIDGQSVLVYGAPHRYNLDYDQGGDIAGYDGTCG 869 YA +STTL ANVENLVL+DA+ P+ A ++G VLVYG P Y LDY QG + GY GTCG Sbjct: 753 YATVSTTLAANVENLVLLDASKPQTAVVNGIHVLVYGRPKSYQLDYKQGDAVKGYRGTCG 812 Query: 870 ETSISNVLNMAGTPVAEPDVVRRAISRALCEPKN-ANGMGGGMNQYNCSTLLDSYGIRNR 928 ET+++N+ + P +E +VV RAI LC+ + GG ++ LL +G+R+ Sbjct: 813 ETAVANITMLGDRPASEKEVVERAIKEKLCDTLTPYDQFRGGSDEKQQQALLKDFGLRSS 872 Query: 929 VSNNFEPQGVVDAVKAGKAVILTVDSGRLWGAPDGDRFIHGDHYVTVTGVACDEATGVAK 988 V+ F+ + V ++K GK V + V +G LWG D+ DH +TVTGVAC TG Sbjct: 873 VTEGFDEKSVAQSIKEGKGVAVGVSAGNLWGMSLRDQD-QSDHVITVTGVACSAMTGDIV 931 Query: 989 GIYIADSGRGNSSDMCRLLSMEEFANVANVYGANVIYTKDPIKMIDANLNGSGNALDNEL 1048 G YIADSG G SD CR +S E+ A V G+ + T DPIK+ + NL+ +GN LDN L Sbjct: 932 GFYIADSGLGRESDRCRFVSSEQLRYAAKVNGSYTLTTDDPIKLRNQNLDATGNELDNVL 991 Query: 1049 VGNRGNNILTGGRGDDTLVGQAGNDTYVFSRGDGRDLVVDNDATKGNLDTLQFSDIKQTN 1108 VGNRGNN+L+GG+G+D L+G GNDTY F++GDG+D + D+DATK NLDTL F+D KQTN Sbjct: 992 VGNRGNNVLSGGKGNDLLIGGPGNDTYSFAKGDGQDELYDHDATKDNLDTLTFADAKQTN 1051 Query: 1109 LWFKHVGNDLQIDVMGGQDQVTIKDWYVGGASGSDNRIERIKTAEGNTLYDTDVEKLVQA 1168 LWF GNDL+I V+G +DQVT+KDWYVGG SG+DN IERIKTA+G TLYDTDVE+LVQA Sbjct: 1052 LWFSKAGNDLKISVLGSKDQVTVKDWYVGGDSGTDNHIERIKTADGKTLYDTDVEQLVQA 1111 Query: 1169 MASFAPPAATQMEWNSGATSEGKVLLTVTH 1198 MASFAPP ATQ W G +S GKVLLTVTH Sbjct: 1112 MASFAPPTATQSSWKDGQSSNGKVLLTVTH 1141 Score = 161 bits (407), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 89/205 (43%), Positives = 122/205 (59%), Gaps = 6/205 (2%) Query: 833 ERATIDGQSVLVYGAPHRYN-LDYDQGGDIAGYDGTCGETSISNVLNMAGTPVAEPDVVR 891 E IDG+ VLVYG P Y+ L+Y QG ++GY GTC E SI+N+L++AG V+E DV++ Sbjct: 187 EHDKIDGKDVLVYGYPKSYDMLNYSQGFAVSGYYGTCTEASIANLLSIAGQDVSEADVIK 246 Query: 892 RAISRALCEPKNAN-GMGGGMNQYNCSTLLDSYGIRNRVSNNFEPQGVVDAVKAGKAVIL 950 RAI C+ + N + GG LL SYG+ V N+F+P+ + VK G+ VIL Sbjct: 247 RAIVNGWCDTTSDNPCLRGGAMTGQQRDLLKSYGVETGVLNDFDPEKLAMLVKQGRGVIL 306 Query: 951 TVDSGRLWGA---PDGDRFIHGDHYVTVTGVACDEATGVAKGIYIADSGRGNSSDMCRLL 1007 V+S LWGA P ++ +H + +TGVA TG G YI+D+GRG D R + Sbjct: 307 GVESKELWGAELPPILHTLLNDNHVINLTGVAYAADTGALLGFYISDTGRGRPEDKARFM 366 Query: 1008 SMEEFANVANV-YGANVIYTKDPIK 1031 ++ E VA+ YG N IYT DPIK Sbjct: 367 TVSELYKVAHFDYGCNAIYTLDPIK 391 Score = 111 bits (278), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 70/206 (33%), Positives = 99/206 (48%), Gaps = 2/206 (0%) Query: 828 DATTPERATIDGQSVLVYGAPHRY-NLDYDQGGDIAGYDGTCGETSISNVLNMAGTPVAE 886 D + P+ G +++YG P Y NL+YDQ +A Y T GE +++N+ +AG ++ Sbjct: 402 DPSKPQMGKEYGVKLIIYGDPKAYHNLNYDQPVVMAMYTETSGEIAVANIAALAGQSLSP 461 Query: 887 PDVVRRAISRALCEP-KNANGMGGGMNQYNCSTLLDSYGIRNRVSNNFEPQGVVDAVKAG 945 V++ AI LC+ K +GGG N LL +GI + F+ V + G Sbjct: 462 KTVLQTAIDEKLCDTTKKDRDLGGGTTSENQVALLKKFGIAATLEQGFDANAVAQHIIEG 521 Query: 946 KAVILTVDSGRLWGAPDGDRFIHGDHYVTVTGVACDEATGVAKGIYIADSGRGNSSDMCR 1005 K VIL V+ G LW + D D+ VTVTGVA TG G Y+AD G S R Sbjct: 522 KGVILRVNGGVLWCKTEPDHPGRSDYSVTVTGVAFSADTGEVAGFYLADPGFELSGARPR 581 Query: 1006 LLSMEEFANVANVYGANVIYTKDPIK 1031 + + +V G I T D IK Sbjct: 582 YIEINHLRQATSVTGVTTITTNDAIK 607 Database: BlastDatabases/689/689 Posted date: Apr 10, 2011 12:15 AM Number of letters in database: 1,619,870 Number of sequences in database: 4735 Lambda K H 0.312 0.132 0.386 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 4735 Number of Hits to DB: 3,269,490 Number of extensions: 140475 Number of successful extensions: 949 Number of sequences better than 1.0e-08: 6 Number of HSP's gapped: 529 Number of HSP's successfully gapped: 26 Length of query: 1198 Length of database: 1,619,870 Length adjustment: 96 Effective length of query: 1102 Effective length of database: 1,165,310 Effective search space: 1284171620 Effective search space used: 1284171620 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.9 bits) S2: 136 (57.0 bits)