BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0007.0128.p (640 letters) Database: BlastDatabases/689/689 4735 sequences; 1,619,870 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|300310722|ref|YP_003774814.1| ABC transporter ATPase [Herbasp... 1203 0.0 gi|300313989|ref|YP_003778081.1| ABC transporter ATPase [Herbasp... 352 5e-98 gi|300311473|ref|YP_003775565.1| ABC transporter ATPase [Herbasp... 249 4e-67 gi|300311530|ref|YP_003775622.1| ABC transporter ATPase [Herbasp... 248 1e-66 gi|300311157|ref|YP_003775249.1| multidrug ABC transporter ATPas... 91 3e-19 >gi|300310722|ref|YP_003774814.1| ABC transporter ATPase [Herbaspirillum seropedicae SmR1] Length = 640 Score = 1203 bits (3112), Expect = 0.0, Method: Compositional matrix adjust. Identities = 627/640 (97%), Positives = 632/640 (98%) Query: 1 MAVISLSDAQLAFGHVALLDHAEFSLETGERIGLIGRNGTGKSSLLKIIAGRSKLDDGLL 60 MAVISLSDAQLAFGHVALLDHAEFSLETGERIGLIGRNGTGKSSLLKIIAGRSKLDDGLL Sbjct: 1 MAVISLSDAQLAFGHVALLDHAEFSLETGERIGLIGRNGTGKSSLLKIIAGRSKLDDGLL 60 Query: 61 VMQQNLKIAYVDQEPHFPEEMTVFDAVASGLGELPALLAEYEAITGQFGGDNDDALLERM 120 VMQQNLKIAYVDQEPHFPEEMTVFDAVASGLGELPALLAEYEAITGQFGGDNDDALLERM Sbjct: 61 VMQQNLKIAYVDQEPHFPEEMTVFDAVASGLGELPALLAEYEAITGQFGGDNDDALLERM 120 Query: 121 HQIQTVLDAADAWSIGNKVETTLDKLNLNRDARIGELSGGMKKRVALACGLVGNPDVLLL 180 HQIQTVLDAADAWSIGNKVETTLDKLNLNRDARIGELSGGMKKRVALACGLVGNPDVLLL Sbjct: 121 HQIQTVLDAADAWSIGNKVETTLDKLNLNRDARIGELSGGMKKRVALACGLVGNPDVLLL 180 Query: 181 DEPTNHLDFGSILWLEGLLRDFKGSILFITHDRSFLDNVSTRIIELDRGKILSFPGNFTT 240 DEPTNHLDFGSILWLEGLLRDFKGSILFITHDRSFLDNVSTRIIELDRGKILSFPGNFTT Sbjct: 181 DEPTNHLDFGSILWLEGLLRDFKGSILFITHDRSFLDNVSTRIIELDRGKILSFPGNFTT 240 Query: 241 YQARKAELLANEEVENAKFDKFLAQEEVWIRKGVQARRTRDEGRVRRLEALRVQRSERRE 300 YQ RKAELLANEEVENAKFDKFLAQEEVWIRKGVQARRTRDEGRVRRLEALRVQRSERRE Sbjct: 241 YQTRKAELLANEEVENAKFDKFLAQEEVWIRKGVQARRTRDEGRVRRLEALRVQRSERRE 300 Query: 301 RQGQVKLEVGTGERSGKIVAELENVNKAYGPKTIVRDFSSILMRGDKVGLIGQNGAGKTT 360 RQGQVKLEVGTGERSGKIVAELENVNKAYGPKTIVRDFS+ILMRGDKVGLIGQNGAGKTT Sbjct: 301 RQGQVKLEVGTGERSGKIVAELENVNKAYGPKTIVRDFSTILMRGDKVGLIGQNGAGKTT 360 Query: 361 LLKLILGEEAPDSGTVKQGTKMLVAYFDQMRAQLNEETTLADTIAPGSDWVEVNGQRKHV 420 LLKLILGEEAPDSGTVKQGTKM VAYFDQMRAQLNEETTLADTIAPGSDWVEVNGQRKHV Sbjct: 361 LLKLILGEEAPDSGTVKQGTKMQVAYFDQMRAQLNEETTLADTIAPGSDWVEVNGQRKHV 420 Query: 421 MTYLSDFLFAPERARSPVRTLSGGERNRLLLARLFAKPANVLVLDEPTNDLDIDTLELLE 480 MTYLSDFLFAPERARSPVRTLSGGERNRLLLARLFAKPANVLVLDEPTNDLDIDTLELLE Sbjct: 421 MTYLSDFLFAPERARSPVRTLSGGERNRLLLARLFAKPANVLVLDEPTNDLDIDTLELLE 480 Query: 481 ELLEEYEGTVFLVSHDRMFLDNVVTQVIASEGNGVWREYVGGYSDWERQRPAQTSAGAKA 540 ELLEEYEGTVFLVSHDRMFLDNVVTQVIASEGNGVWREYVGGYSDWERQRPAQ +A +KA Sbjct: 481 ELLEEYEGTVFLVSHDRMFLDNVVTQVIASEGNGVWREYVGGYSDWERQRPAQQAASSKA 540 Query: 541 AAKAADKNEVKAESTMAAPAAAPAPAKKKLSYKEQRELEELPKRIAALEAEQKELSAKLA 600 AAKAADK+EVKAESTMAAP AP AKKKLSYKEQREL+ELPKRIAALEAEQKELSAKLA Sbjct: 541 AAKAADKSEVKAESTMAAPVVAPVAAKKKLSYKEQRELDELPKRIAALEAEQKELSAKLA 600 Query: 601 DPDLYKKGADEAVKLNQRFAEIDEELLVSLERWEEIEGKQ 640 DPDLYKKGADEAVKLNQRFAEIDEELLVSLERWEEIEGKQ Sbjct: 601 DPDLYKKGADEAVKLNQRFAEIDEELLVSLERWEEIEGKQ 640 >gi|300313989|ref|YP_003778081.1| ABC transporter ATPase [Herbaspirillum seropedicae SmR1] Length = 555 Score = 352 bits (903), Expect = 5e-98, Method: Compositional matrix adjust. Identities = 203/513 (39%), Positives = 299/513 (58%), Gaps = 5/513 (0%) Query: 18 LLDHAEFSLETGERIGLIGRNGTGKSSLLKIIAGRSKLDDGLLVMQQNLKIAYVDQEPHF 77 +L S G +IG++G NG+GKS+LLKI+AG K +G + NL I Y+ QEP Sbjct: 21 ILKDISLSFFPGAKIGVLGLNGSGKSTLLKIMAGIDKEIEGEAIPMPNLNIGYLPQEPQL 80 Query: 78 PEEMTVFDAVASGLGELPALLAEYEAITGQFGGDNDD--ALLERMHQIQTVLDAADAWSI 135 E TV V S LGE+ A+ +A+ + ++ D AL +++ ++ AAD S+ Sbjct: 81 DAEKTVRQEVESALGEVFEAQAKLDAVYAAYAEEDADFDALATEQARLEAIIAAADGNSL 140 Query: 136 GNKVETTLDKLNLNR-DARIGELSGGMKKRVALACGLVGNPDVLLLDEPTNHLDFGSILW 194 ++E D L L DA+IG LSGG K+RVAL L+ PD+LLLDEPTNHLD S+ W Sbjct: 141 NQQLEMAADALRLPPWDAKIGVLSGGEKRRVALCKLLLSKPDMLLLDEPTNHLDAESVDW 200 Query: 195 LEGLLRDFKGSILFITHDRSFLDNVSTRIIELDRGKILSFPGNFTTYQARKAELLANEEV 254 LE L+ F G+++ ITHDR FLDN + I+ELDRG + + GN++++ +K L EE Sbjct: 201 LEQFLQRFPGTVVAITHDRYFLDNAAEWILELDRGHGIPWKGNYSSWLEQKEARLKQEEA 260 Query: 255 ENAKFDKFLAQEEVWIRKGVQARRTRDEGRVRRLEALRVQRSERRERQGQVKLEVGTGER 314 + K +A+E W+R+ + R+ + + R+ R L ++R ++ + V ER Sbjct: 261 SESARQKTIAKELEWVRQNPKGRQAKSKARLARFNELSEYEYQKRNETQEIFIPVA--ER 318 Query: 315 SGKIVAELENVNKAYGPKTIVRDFSSILMRGDKVGLIGQNGAGKTTLLKLILGEEAPDSG 374 G V E +NV+K YG + ++ D + + G VG+IG NGAGK+TL +++ G E PDSG Sbjct: 319 LGNEVIEFKNVSKGYGDRLLIDDLNFKIPAGAIVGIIGPNGAGKSTLFRMLAGRETPDSG 378 Query: 375 TVKQGTKMLVAYFDQMRAQLNEETTLADTIAPGSDWVEVNGQRKHVMTYLSDFLFAPERA 434 V G + V+ DQ R L + T+ + ++ G+D + V YL F F Sbjct: 379 EVVLGPTVKVSLVDQSREDLGNKKTVFEDVSGGADILTVGRFEMPSRAYLGRFNFKGGDQ 438 Query: 435 RSPVRTLSGGERNRLLLARLFAKPANVLVLDEPTNDLDIDTLELLEELLEEYEGTVFLVS 494 + V LSGGER RL LA+ + NVL+LDEP+NDLD++TL LE+ L E+ GTV ++S Sbjct: 439 QKIVGNLSGGERGRLHLAKTLLQGGNVLLLDEPSNDLDVETLRALEDALLEFAGTVLVIS 498 Query: 495 HDRMFLDNVVTQVIASEGNGVWREYVGGYSDWE 527 HDR FLD + T +IA EG+ + G Y ++E Sbjct: 499 HDRWFLDRIATHIIAFEGDSQVTFFDGNYQEYE 531 Score = 114 bits (286), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 80/252 (31%), Positives = 122/252 (48%), Gaps = 35/252 (13%) Query: 3 VISLSDAQLAFGHVALLDHAEFSLETGERIGLIGRNGTGKSSLLKIIAGRSKLDDGLLVM 62 VI + +G L+D F + G +G+IG NG GKS+L +++AGR D G +V+ Sbjct: 323 VIEFKNVSKGYGDRLLIDDLNFKIPAGAIVGIIGPNGAGKSTLFRMLAGRETPDSGEVVL 382 Query: 63 QQNLKIAYVDQE-PHFPEEMTVFDAVASGLGELPALLAEYEAITGQFGGDNDDALLERMH 121 +K++ VDQ + TVF+ V+ G L G+F + R + Sbjct: 383 GPTVKVSLVDQSREDLGNKKTVFEDVSGGADIL---------TVGRF------EMPSRAY 427 Query: 122 QIQTVLDAADAWSIGNKVETTLDKLNLNRDARIGELSGGMKKRVALACGLVGNPDVLLLD 181 + D I +G LSGG + R+ LA L+ +VLLLD Sbjct: 428 LGRFNFKGGDQQKI------------------VGNLSGGERGRLHLAKTLLQGGNVLLLD 469 Query: 182 EPTNHLDFGSILWLEGLLRDFKGSILFITHDRSFLDNVSTRIIELD-RGKILSFPGNFTT 240 EP+N LD ++ LE L +F G++L I+HDR FLD ++T II + ++ F GN+ Sbjct: 470 EPSNDLDVETLRALEDALLEFAGTVLVISHDRWFLDRIATHIIAFEGDSQVTFFDGNYQE 529 Query: 241 YQARKAELLANE 252 Y+A K + L E Sbjct: 530 YEADKKKRLGEE 541 >gi|300311473|ref|YP_003775565.1| ABC transporter ATPase [Herbaspirillum seropedicae SmR1] Length = 660 Score = 249 bits (637), Expect = 4e-67, Method: Compositional matrix adjust. Identities = 202/651 (31%), Positives = 317/651 (48%), Gaps = 62/651 (9%) Query: 3 VISLSDAQLAFGHVALLDHAEFSLETGERIGLIGRNGTGKSSLLKIIAGRSKLDDGLLVM 62 +I L G LL++ + +L G++IGLIG NG GKSSL ++ G D G + Sbjct: 1 MIRFQQVSLQRGVKPLLENVDLTLNPGDKIGLIGANGAGKSSLFAMLRGELHADQGNIDF 60 Query: 63 QQNLKIAYVDQEPHFPEEMTVFDAVASGLGELPALLAEYEAITGQFGGDNDDALLERMHQ 122 ++AYV QE + + A+ G L L AE Q +D + +H Sbjct: 61 PARWRMAYVAQETPALDRPAIEYAI-DGDAHLRQLEAELARAEAQPDDKHDGNHIAELH- 118 Query: 123 IQTVLDAADAWSIGNKVETTLDKLNLNRDAR---IGELSGGMKKRVALACGLVGNPDVLL 179 T L ADA+++ ++ E L L + + + SGG + R+ LA L+ D+LL Sbjct: 119 --TALADADAYTVRSRAEQLLLGLGFSLEQMERPVASFSGGWRMRLNLAQALMCPSDLLL 176 Query: 180 LDEPTNHLDFGSILWLEGLLRDFKGSILFITHDRSFLDNVSTRIIELDRGKILSFPGNFT 239 LDEPTNHLD +I+WLE L+ ++G++L I+HDR FLD V I+ +D K+ + GN++ Sbjct: 177 LDEPTNHLDLDAIIWLEDWLKRYEGTLLIISHDRDFLDGVVNVIVHIDDRKLKRYSGNYS 236 Query: 240 TYQARKA---ELLA----NEEVENAKFDKFLAQEEVWIRKGVQAR-RTRDEGRVRRLEAL 291 ++ +++ EL+A ++ + A F+ + + K QA+ R + ++ L L Sbjct: 237 AFERQRSAQLELMAGMIEKQQRQRAHLQSFIDRFKAKATKARQAQSRMKALSKMEELAPL 296 Query: 292 RVQRSERRERQGQVKLEVGTGERSGKIVAELENVNKAY-------GP---KTIVRDFSSI 341 R + E + + +E VN Y P K IV Sbjct: 297 RA--------AAEFSFEFREPLSAPNPLLVMEKVNAGYHIEGKNGAPDEDKIIVHGIDFS 348 Query: 342 LMRGDKVGLIGQNGAGKTTLLKLILGEEAPDSGTVKQGTKMLVAYFDQMRAQL--NEETT 399 L G ++GL+G NGAGK+TL+K + GE P SGT + G +++ YF Q + ++ ++E+ Sbjct: 349 LQNGQRIGLLGVNGAGKSTLIKTVAGEIDPLSGTARLGKGLVIGYFAQHQVEMLRHDESP 408 Query: 400 LADTIAPGSDWVEVNGQRKHVMTYLSDFLFAPERARSPVRTLSGGERNRLLLARLFAKPA 459 L D E + + +L F F A S + SGGE+ RL LA + + Sbjct: 409 LWHLTRLAPDVRE-----QELRNFLGSFNFNGTMATSSIAPFSGGEKARLALALIVWQRP 463 Query: 460 NVLVLDEPTNDLDIDTLELLEELLEEYEGTVFLVSHDRMFLDNVVTQ-VIASEGNGVWRE 518 N+L+LDEPTN LD++T E L L ++EGT+ LVSHDR L Q +I +EG + Sbjct: 464 NLLLLDEPTNHLDLETREALTMALAQFEGTLVLVSHDRHLLRATTDQFLIVAEGK--LQP 521 Query: 519 YVG---GYSDWERQRPAQTSAGAKAAAKAADKNEVKAESTMAAPAAAPAPAKKKLSYKEQ 575 + G Y DW +T A+ A AA ++ +APAA ++K EQ Sbjct: 522 FDGDLDDYKDWL----FKTKLAARNDAAAAAPLPTASQPVESAPAALVDRKEQKRLEAEQ 577 Query: 576 RE------------LEELPKRIAALEAEQKELSAKLADPDLYKKGADEAVK 614 R+ ++ L ++IA L + E+ A+LA PD+Y E +K Sbjct: 578 RQKMSALKKPIEARIKRLDEQIAKLNVRKAEIDARLASPDIYDAANKEELK 628 >gi|300311530|ref|YP_003775622.1| ABC transporter ATPase [Herbaspirillum seropedicae SmR1] Length = 532 Score = 248 bits (632), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 163/535 (30%), Positives = 283/535 (52%), Gaps = 21/535 (3%) Query: 3 VISLSDAQLAFGHVALLDHAEFSLETGERIGLIGRNGTGKSSLLKIIAGRSKLDDGLLVM 62 ++S ++ + FG L ++ G R GLIG NG GKS+ +KI+ G + G + + Sbjct: 1 MLSTANITMQFGAKPLFENISVKFGDGNRYGLIGANGCGKSTFMKILGGDLEPSAGNVSL 60 Query: 63 QQNLKIAYVDQEPHFPEEMTVFDAVASGLGELPALLAEYEAITGQFGGDNDDALLERMHQ 122 N ++ + Q+ EEM V D V G E+ A ++E +AI +DD + + Sbjct: 61 DVNERLGKLRQDQFAYEEMRVLDVVMMGHVEMWAAMSERDAIYANPDATDDDYM--KAAD 118 Query: 123 IQTVLDAADAWSIGNKVETTLDKLNLNRDARIGELSG---GMKKRVALACGLVGNPDVLL 179 ++ D ++ + L + + + G +S G K RV LA L NPD+LL Sbjct: 119 LEAKFAEYDGYTAEARAGELLLGVGVPIEQHNGPMSNVAPGWKLRVLLAQALFSNPDILL 178 Query: 180 LDEPTNHLDFGSILWLEGLLRDFKGSILFITHDRSFLDNVSTRIIELDRGKILSFPGNFT 239 LDEPTN+LD +I WLE +L + +++ I+HDR FL+ V T + ++D G + +PGN+ Sbjct: 179 LDEPTNNLDINTIRWLEEVLNERNSTMIIISHDRHFLNQVCTHMADMDYGTLKIYPGNYD 238 Query: 240 TYQARKAELLANEEVENAKFDKFLAQEEVWIRK--GVQARRTRDEGRVRRLEALRVQRSE 297 Y ++ A + NAK + +A+ + ++R+ +++ + R ++++ ++V+ + Sbjct: 239 DYMLASSQARAQQLAANAKAKEKVAELQDFVRRFSANKSKARQATSRAKQIDKIKVEDIK 298 Query: 298 RRERQGQ-VKLEVGTGERS-GKIVAELENVNKAYGPKTIVRDFSSILMRGDKVGLIGQNG 355 R ++ E GE+ ++ E + + K Y + I ++FS ++ G+K+ +IG NG Sbjct: 299 PSSRVNPFIRFE---GEKKLHRLAVETQGITKTY-DRDIFKNFSIMVEAGEKIAIIGANG 354 Query: 356 AGKTTLLKLILGEEA---PDSGTVKQGTKMLVAYFDQ-MRAQLNEETTLADTIAPGSDWV 411 AGKTTLL+ I G+ PD G VK V Y Q + TL D + W Sbjct: 355 AGKTTLLRSIGGDVTGLHPDGGLVKWAENANVGYMPQDPTEEFAGGETLTDWMGK---WT 411 Query: 412 EVNGQRKHVMTYLSDFLFAPERARSPVRTLSGGERNRLLLARLFAKPANVLVLDEPTNDL 471 + + V L LF+ + + V+ LSGGE+ R++ +L NVL++DEPTN + Sbjct: 412 QEGDDDQAVRGILGRLLFSGDDVKKSVKVLSGGEKGRMMYGKLMLGRHNVLLMDEPTNHM 471 Query: 472 DIDTLELLEELLEEYEGTVFLVSHDRMFLDNVVTQVIASEGNGVWREYVGGYSDW 526 D++++E L LE+Y GT+ VSHDR F+ ++ T+++ + +G ++ GGY D+ Sbjct: 472 DMESIESLNIALEKYAGTLIFVSHDREFVSSLATRILEVK-DGQVIDFQGGYEDY 525 Score = 97.8 bits (242), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 65/224 (29%), Positives = 113/224 (50%), Gaps = 37/224 (16%) Query: 26 LETGERIGLIGRNGTGKSSLLKIIAGRS---KLDDGLLVMQQNLKIAYVDQEPHFPEEMT 82 +E GE+I +IG NG GK++LL+ I G D GL+ +N + Y+ Q+P EE Sbjct: 341 VEAGEKIAIIGANGAGKTTLLRSIGGDVTGLHPDGGLVKWAENANVGYMPQDP--TEEFA 398 Query: 83 VFDAVASGLGELPALLAEYEAITGQFGGDNDDALLERMHQIQTVLDAADAWSIGNKVETT 142 + + +G+ + +A+ G G +L + D Sbjct: 399 GGETLTDWMGKWTQEGDDDQAVRGILG---------------RLLFSGD----------- 432 Query: 143 LDKLNLNRDARIGELSGGMKKRVALACGLVGNPDVLLLDEPTNHLDFGSILWLEGLLRDF 202 ++ + ++ LSGG K R+ ++G +VLL+DEPTNH+D SI L L + Sbjct: 433 ----DVKKSVKV--LSGGEKGRMMYGKLMLGRHNVLLMDEPTNHMDMESIESLNIALEKY 486 Query: 203 KGSILFITHDRSFLDNVSTRIIELDRGKILSFPGNFTTYQARKA 246 G+++F++HDR F+ +++TRI+E+ G+++ F G + Y A + Sbjct: 487 AGTLIFVSHDREFVSSLATRILEVKDGQVIDFQGGYEDYLASQG 530 >gi|300311157|ref|YP_003775249.1| multidrug ABC transporter ATPase [Herbaspirillum seropedicae SmR1] Length = 923 Score = 90.9 bits (224), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 129/528 (24%), Positives = 208/528 (39%), Gaps = 105/528 (19%) Query: 2 AVISLSDAQLAFGHVALLDHAEFSLETGERIGLIGRNGTGKSSLLKIIAGRSKLDDG-LL 60 V L L +G LD + G +GLIG +G GKSSLL ++AG L G L Sbjct: 9 CVARLQRVALRYGKTVALDAVSLDIPAGCMVGLIGPDGVGKSSLLSLVAGARALQQGELA 68 Query: 61 VMQQNLKIAYVDQEPHFPEEMTVFDAVASGLGE--LPAL-LAEYEAITGQFGGDNDDALL 117 V+ +++ Q+ H + + GLG+ P L + E G+ G + Sbjct: 69 VLGGDMR-----QQRHRQQACPRIAYMPQGLGKNLYPTLSVEENLQFFGRLFGQDASERR 123 Query: 118 ERMHQIQTVLDAADAWSIGNKVETTLDKLNLNRDARIGELSGGMKKRVALACGLVGNPDV 177 R+ ++ T T LDK L R A G+LSGGMK+++ L C L+ +PD+ Sbjct: 124 RRIDELTT--------------STGLDKF-LARPA--GKLSGGMKQKLGLCCSLIHDPDL 166 Query: 178 LLLDEPTNHLDFGSILWLEGLLRDFKGSILFITHDRSFLDNVSTRIIELDRGKILSFPGN 237 L+LDEPT +D L R + + Sbjct: 167 LILDEPTTGVD------------------------------------PLSRAQFWDLIAH 190 Query: 238 FTTYQARKAELLANEEVENA-KFDKFLAQEEVWI-RKGVQARRTRDEGRVRRLEALRVQR 295 +A + ++A +E A +FD +A +E + G + + G EA Sbjct: 191 IRQQRAGMSVIVATAYMEEADRFDWLVAMDEGRVLATGTPVQLHQRTGTASLEEAFIALL 250 Query: 296 SERRERQGQ-VKLEVGTGERSGKIVAELENVNKAYGPKTIVRDFSSILMRGDKVGLIGQN 354 E + R Q V++ + E + + +G V + RG+ G +G N Sbjct: 251 PEEKRRGHQTVQVTPLDDTIDSGVAIEAKGLTMRFGDFLAVDHVDFRIRRGEIFGFLGSN 310 Query: 355 GAGKTTLLKLILGEEAPDSGTV----------KQGTKMLVAYFDQ---MRAQLNEETTL- 400 G GK+T +K++ G G T+ V Y Q + +L+ L Sbjct: 311 GCGKSTTMKMLTGLLPASEGQAWLFGREIDPRDMATRARVGYMSQAFSLYGELSVRQNLV 370 Query: 401 ---------ADTIAPGSDWVEVNGQRKHVMTYLSDFLFAPERARSPVRTLSGGERNRLLL 451 A+ IA +D + R+ + + D L PE +L G R RL L Sbjct: 371 LHARLYRVPAEQIAARTDEMA----RRFGLLDVMDSL--PE-------SLPLGIRQRLSL 417 Query: 452 ARLFAKPANVLVLDEPTNDLDIDTLELLEELL----EEYEGTVFLVSH 495 A +L+LDEPT+ +D +L +L+ + + T+F+ +H Sbjct: 418 AVAMVHKPELLILDEPTSGVDPIARDLFWQLMIGLARQDQVTIFISTH 465 Database: BlastDatabases/689/689 Posted date: Apr 10, 2011 12:15 AM Number of letters in database: 1,619,870 Number of sequences in database: 4735 Lambda K H 0.315 0.134 0.373 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 4735 Number of Hits to DB: 1,867,091 Number of extensions: 77151 Number of successful extensions: 995 Number of sequences better than 1.0e-08: 64 Number of HSP's gapped: 910 Number of HSP's successfully gapped: 85 Length of query: 640 Length of database: 1,619,870 Length adjustment: 91 Effective length of query: 549 Effective length of database: 1,188,985 Effective search space: 652752765 Effective search space used: 652752765 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 134 (56.2 bits)