BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0006.0031.p
         (382 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300314035|ref|YP_003778127.1| transmembrane patatin-like phos...   674   0.0  
gi|300312580|ref|YP_003776672.1| FabD/lysophospholipase-like est...    92   8e-20

>gi|300314035|ref|YP_003778127.1| transmembrane patatin-like
           phospholipase [Herbaspirillum seropedicae SmR1]
          Length = 395

 Score =  674 bits (1738), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 322/372 (86%), Positives = 346/372 (93%)

Query: 1   VAAKPRVALVLQGGGALGAYQAGVYQALHENDLTPDWVVGTSIGAINAALIAGNPRETRI 60
           VA KPRVALVLQGGGALGAYQAGVYQALHE+D TPDWVVGTSIGAINAALIAGNPRETRI
Sbjct: 21  VAEKPRVALVLQGGGALGAYQAGVYQALHEHDFTPDWVVGTSIGAINAALIAGNPRETRI 80

Query: 61  ARLREFWETVAHPDVFDLRQVPDALRPWATRLTTLDTFLRGTAGFFRPRPLNPFALGLPV 120
            RLREFWETVAHPD+ DLR VPD LRPWATRLTT+DTFLRGT GFFRPRPLN FALGLPV
Sbjct: 81  ERLREFWETVAHPDLLDLRTVPDTLRPWATRLTTMDTFLRGTPGFFRPRPLNAFALGLPV 140

Query: 121 PPDEASFYSTAELGETLSRLVDFDYLNGPSGIRMTVAAVKVTCGTLVNFDSRQRPLGPEH 180
           PP+EASFYSTAEL +TLSRLVDFDYLNG SGIRMTV+AVKV+CGTLVNFDSR++ LGP+H
Sbjct: 141 PPEEASFYSTAELEQTLSRLVDFDYLNGQSGIRMTVSAVKVSCGTLVNFDSREQALGPQH 200

Query: 181 VMASGALPPGFAPVRIDGELYWDGGLYSNTPLEAVLNDEPRTNLLCMMVDLWHADGPEPR 240
           V+ASGALPPGFAPVR++GELYWDGGLYSNTPLEAVLND PRTNL+C+MVDLWHADGPEPR
Sbjct: 201 VLASGALPPGFAPVRVEGELYWDGGLYSNTPLEAVLNDTPRTNLVCLMVDLWHADGPEPR 260

Query: 241 TLEEVQTREKDVTFASRSQRHIDAYLQQYKLRRAAHALYKRLPPDMLTQQDRQMMAELGA 300
           TLEEV TREKDVTFASRSQRHIDAYLQQY+LRRAAH LY+RLP ++LTQQDRQMMAEL A
Sbjct: 261 TLEEVVTREKDVTFASRSQRHIDAYLQQYRLRRAAHDLYQRLPRELLTQQDRQMMAELDA 320

Query: 301 DSTIHIVRLAYAGRDWNMASKDVNFAKGSVMWRWEQGYQDGLRAIALGKGCPFSESDTGI 360
           D+TIHIVRLAYAGRDWNMASKDVNFA+GSV WRWEQGYQD LR IAL +   F +S+ GI
Sbjct: 321 DTTIHIVRLAYAGRDWNMASKDVNFARGSVRWRWEQGYQDALRGIALSQEDSFGQSEAGI 380

Query: 361 VVHDLPSGDTHV 372
           VVHDLPSG THV
Sbjct: 381 VVHDLPSGQTHV 392


>gi|300312580|ref|YP_003776672.1| FabD/lysophospholipase-like
           esterase [Herbaspirillum seropedicae SmR1]
          Length = 338

 Score = 91.7 bits (226), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 81/258 (31%), Positives = 124/258 (48%), Gaps = 28/258 (10%)

Query: 7   VALVLQGGGALGAYQAGVYQALHEND-LTPDWVVGTSIGAINAALIAG----NPRETRIA 61
           ++L LQGGG+ GA+  GV   L E+  L  + + G S GA+NA ++A     + RE   A
Sbjct: 6   ISLALQGGGSHGAFTWGVLDRLLEDGRLGFEGISGASAGAMNAVVLAQGYVQDGREGARA 65

Query: 62  RLREFW---ETVAHPDVFDLRQVPDALRPWATRLTTLDTFLRGTAGFFRPRPLNPFALGL 118
            L  FW    T A  D  +    P    P  T +  +   L  T  FF P  LNP    L
Sbjct: 66  ALERFWTALSTGAPLDYINAEGAPVIANP--TPMPGMQALLAMTR-FFSPTQLNP----L 118

Query: 119 PVPPDEASFYSTAELGETLSRLVDFDYLNGPSGIRMTVAAVKVTCGTLVNFDSRQRPLGP 178
            + P          L + L   VDFD L     +++ +AA +V+ GTL  F  R   L  
Sbjct: 119 DINP----------LRDILLEQVDFDRLRRQRELKLFIAATQVSTGTLKIF--RNADLSV 166

Query: 179 EHVMASGALPPGFAPVRIDGELYWDGGLYSNTPLEAVLNDEPRTNLLCMMVDLWHADGPE 238
           E ++AS  LP    P+ I+GE YWDGGL +N P+  +L+     +++ +++      G  
Sbjct: 167 EALLASACLPSLHRPIEIEGEAYWDGGLTANPPIFPLLHACAARDVMVVLLHPSRRAGT- 225

Query: 239 PRTLEEVQTREKDVTFAS 256
           P +  ++  R  +++F+S
Sbjct: 226 PTSTHDIGQRLSEISFSS 243


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.320    0.136    0.422 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 1,200,365
Number of extensions: 52215
Number of successful extensions: 130
Number of sequences better than 1.0e-08: 2
Number of HSP's gapped: 129
Number of HSP's successfully gapped: 2
Length of query: 382
Length of database: 1,619,870
Length adjustment: 87
Effective length of query: 295
Effective length of database: 1,207,925
Effective search space: 356337875
Effective search space used: 356337875
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 131 (55.1 bits)