BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0004.0061.p (712 letters) Database: BlastDatabases/689/689 4735 sequences; 1,619,870 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|300312345|ref|YP_003776437.1| cell wall surface anchor protei... 681 0.0 gi|300310420|ref|YP_003774512.1| inner membrane protein [Herbasp... 471 e-133 gi|300313785|ref|YP_003777877.1| autotransporter adhesin protein... 436 e-123 gi|300310421|ref|YP_003774513.1| hypothetical protein Hsero_1088... 388 e-109 >gi|300312345|ref|YP_003776437.1| cell wall surface anchor protein [Herbaspirillum seropedicae SmR1] Length = 7175 Score = 681 bits (1757), Expect = 0.0, Method: Compositional matrix adjust. Identities = 359/717 (50%), Positives = 485/717 (67%), Gaps = 5/717 (0%) Query: 1 VVQAIKLAGSSTHDGLRTAQVSLVSASGETGNPSTASIRFDTHAPVLDADTSRVDVQTSS 60 +VQ+IKL G++ DG+RTA +LVS +GETG STA++ DT AP++D D + VQ S+ Sbjct: 6459 LVQSIKLGGAALGDGVRTASFALVSTTGETGGASTAALMVDTRAPLVDLDGALPGVQNSA 6518 Query: 61 FKTLNGAKAVAGEGLFAHDIVVWPTSDISSIVIRMDGPQLNLQHDKLLLDVPLALDASLP 120 K+++ A+A AGE LF + VV +DI SI + M G L+L DKL+LD PL L+ S Sbjct: 6519 SKSISAARATAGESLFPQETVVQQANDIVSIKLAMSGAALDLARDKLVLDQPLDLNTSAT 6578 Query: 121 SVTGKTVGGVAGLTYGYEGSGHRLSISKSSGAALSGLEARAILKAIQFQNATPSAGDRSA 180 ++ + VGGVAGL+YGY+ + LSISK++G A++ E +I+KAIQF+NA P AGDR A Sbjct: 6579 TIGNRVVGGVAGLSYGYDDASRTLSISKTAGTAMTSDEVSSIVKAIQFKNAAPQAGDRLA 6638 Query: 181 SITLTDQAGNSNTVVANLSVDLTLPASISAALVSGKQVSYKTLTVPDIMGSTNPHNLHSG 240 S+TLTD AGN +T LSVD T+PAS+ A L +G Q+SYK L+VPD++G N H L +G Sbjct: 6639 SLTLTDLAGNRSTASVKLSVDTTVPASLKATLAAGNQLSYKMLSVPDVLGPINKHTLSNG 6698 Query: 241 ESADLTSLLPADMTAASFISSLKGMYAEWGGMAITTNDNTTEKHFNSVYSFPNGFGLGTT 300 ES DL+SL+P A S +SSLKG+Y EWGG+A + N NTT + SV F + G + Sbjct: 6699 ESVDLSSLMPGSGDAVSLLSSLKGIYGEWGGLAFSGNGNTTNPNDRSVIGFSSSPGFDHS 6758 Query: 301 FAVVHQGGPYAKGENFKFVSPDGHQLLLSALDGFYAANTDVFSYKSP--TATQNYDIGNV 358 F ++HQ GE++ F +PD L+L+A GF NTDVF++ + YDIGN+ Sbjct: 6759 FRLIHQNNRLVMGESYFFTAPDAKTLVLNAQAGFDDVNTDVFAFNPDGVPMDKGYDIGNL 6818 Query: 359 RLLYQVTTDNPSSQPTIKVSYDGTKASAGDVIGLYEGDKLLGSRTLTAADVGTAGMTLDV 418 RLL+Q T N ++QPTI+VS+DGT+A+AGDVI L EG ++L SRTL+ AD+G++ +TL + Sbjct: 6819 RLLFQAPTANVNTQPTIQVSFDGTRAAAGDVIRLMEGGQVLASRTLSDADLGSSNVTLSL 6878 Query: 419 TTTGSLSAGEHVIQTRFSDTAGNLVVGNDVHVTLAAGAVAPMLGNLRVNGETPDIQPINA 478 T SL AG+H + +++ D AGN V GND+ + GA AP+L NL+V+G+ Q IN Sbjct: 6879 TPASSLGAGQHTLSSKYIDVAGNTVTGNDIVFNVQGGATAPVLSNLKVSGDGQAAQAIND 6938 Query: 479 SSTKYAMIAETPTSAATLTGLDQNLTFSGTVGGAGTNDTYLISVSMGGKVIVFGEVKAGD 538 S+T+YAM++ + +GL L+F+GTVG AG+ +YL++VSMGGK++ F + AGD Sbjct: 6939 STTRYAMVSAAAGDSTGSSGLQHQLSFTGTVGTAGSGHSYLVTVSMGGKLLAFNQFAAGD 6998 Query: 539 FSLTTPANVLAPGMYHDLTITATNTSAGVNNGQTTVVQNQTLGWYWVPQKLESLKGGAGD 598 F L PANVLAPG Y DL+I AT+ + G +NGQ+T + QTLGWYW PQ L +L GAGD Sbjct: 6999 FKLEAPANVLAPGFYKDLSIVATDVTDGPSNGQSTAIGGQTLGWYWAPQSLTNLTAGAGD 7058 Query: 599 DQIQLSVTA---GGANTVVQTGIGKDTLVLGGFGTSDSSRLVATVSDFTLGQDKVAVFAQ 655 D I L A G NT VQTG GKDTLV+G G +DS+RL+A VSDF +G DKV+V Q Sbjct: 7059 DMIPLGAAATANGIYNTEVQTGAGKDTLVVGASGATDSARLMARVSDFMVGMDKVSVAGQ 7118 Query: 656 NVTKDNLGTYVQASSYNTSSTKLMVDLDGAGAGNTVYTLYLQNLAYNPGNTHTIFGV 712 VT NL +V AS+ + T L +DLDG G G+ YTL L N+ Y NTHTIFGV Sbjct: 7119 TVTAANLDRFVTASAAPANGTILSIDLDGPGPGSLTYTLLLVNVQYAQSNTHTIFGV 7175 Score = 84.7 bits (208), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 65/209 (31%), Positives = 111/209 (53%), Gaps = 7/209 (3%) Query: 1 VVQAIKLAGSSTHDGLRTAQVSLVSASGETGNPST-ASIRFDTHAPVLDADTSRVDVQTS 59 +V+ IKL + G RT +SLV A G+ +P A++ + ++D D Q + Sbjct: 6298 IVENIKLQNVAPTPGRRTIDISLVDA-GKLASPVVQATLAISSDNLLIDLDPKTTGAQLA 6356 Query: 60 SFKTLNGAKAVAGEGLFAHDIVVWPTSDISSIVIRMDGPQLNLQHDKLLLDVPLALDASL 119 + + + A +A F ++ + + + + G LN + DKL+LD PL L ASL Sbjct: 6357 ATQIVTDAAVLAAGVAFDANVGAPSATTARLLRVSLGGAGLNPKSDKLMLDTPLDLSASL 6416 Query: 120 PSVTGKTVGGVAGLTYGYEGSGHRLSISKSSGAALSGLEARAILKAIQFQNATPSAGDRS 179 +V+G+TV G+ GL+Y Y+ + L I+K+ G+ LSG + ++++++I+ A G R+ Sbjct: 6417 ATVSGRTVAGITGLSYTYDAASRTLDIAKTDGSTLSGSQVQSLVQSIKLGGAALGDGVRT 6476 Query: 180 ASITL---TDQAGNSNTVVANLSVDLTLP 205 AS L T + G ++T A L VD P Sbjct: 6477 ASFALVSTTGETGGAST--AALMVDTRAP 6503 Score = 71.2 bits (173), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 56/166 (33%), Positives = 89/166 (53%), Gaps = 9/166 (5%) Query: 45 PVLDADTSRVDVQTSSFKTLNGAKAVAGEGLFAHDIVVWPTSDISSIVIRMDGPQLNLQH 104 P LD D + QT++ + + ++ AG A D+ + ++I + GP+L + Sbjct: 6182 PTLDLDAAVARTQTTALRQSSNSELRAGTAFLA-DVAAPLKNSTTTIKVVFGGPELRVAD 6240 Query: 105 DKLLLDVPLALDASLPSVTGKTVGGVAGLTYGYEGSGHRLSISKSSGAALSGLEARAILK 164 D+LLLD +ALD +L V GKTVGGV ++Y Y + LS++K+ G +G E AI++ Sbjct: 6241 DRLLLDALVALDQNLAPVKGKTVGGVNDVSYVYTAATRTLSLTKTLGGTFTGQEVEAIVE 6300 Query: 165 AIQFQNATPSAGDRSASITLTDQAGNSNTVVA--------NLSVDL 202 I+ QN P+ G R+ I+L D ++ VV NL +DL Sbjct: 6301 NIKLQNVAPTPGRRTIDISLVDAGKLASPVVQATLAISSDNLLIDL 6346 >gi|300310420|ref|YP_003774512.1| inner membrane protein [Herbaspirillum seropedicae SmR1] Length = 1882 Score = 471 bits (1212), Expect = e-133, Method: Compositional matrix adjust. Identities = 283/734 (38%), Positives = 421/734 (57%), Gaps = 30/734 (4%) Query: 1 VVQAIKLAGSSTHDGLRTAQVSLVSASGETGNPSTASIRFDTHAPVLDADTSRVDVQTSS 60 +V+ +KL DG R AQ L+ GE G PST + DT APVLD D Q+ S Sbjct: 1157 IVRLVKLVNPLGLDGERQAQFRLIDMDGEMGTPSTTRLLVDTQAPVLDLDFFTPGTQSLS 1216 Query: 61 FKTLNGAKAVAG---EGLFAHDIVVWPTSDISSIVIRMDGPQ--LNLQHDKLLLD----- 110 KT+ +A + EGLF+H I +D++ I ++ G L+ D L L Sbjct: 1217 EKTIGLGRANSDGYPEGLFSHRITAPMANDVARIKLQFSGKDAPLSFSEDVLALKNEDYW 1276 Query: 111 VPLA-LD-ASLPSVTGKTVGGVAGLTYGYEGSGHRLSISKSSGAALSGLEARAILKAIQF 168 P+A +D +V GK +G + Y Y+ + L K G + G E +A+L+++ + Sbjct: 1277 QPVAEIDLGKSNTVHGKYIGKLYDFNYTYDAATKELVFQKWLGESFLGTEVKALLESLHY 1336 Query: 169 QNATPSAGDRSASITLTDQAGNSNTVVANLSVDLTLPASISAALVSGKQVSYKTLTVPDI 228 + + G RS ITLTDQAGNS++ + VD T ++ A LV+ Q+SY+ L + DI Sbjct: 1337 KIGSKEPGTRSIDITLTDQAGNSSSATTRIKVDTTPAPAVKAELVAQNQMSYQVLNLGDI 1396 Query: 229 MGSTNPHNLHSGESADLTSLLPADMTAASFISSLKGMYAEWGGMAITTNDNTTEKHFNSV 288 +G +PHNL GES +L LP M A +F++++KG+ AEWGG IT N NTT + S Sbjct: 1397 LGQVHPHNLSKGESVNLP--LPVGMDAQTFLAAVKGISAEWGGRGITGNPNTTFAEYKSY 1454 Query: 289 YSFPNGFGLGTTFAVVHQGGPYAKGENFKF-VSPDGHQLLLSALDGFYAANTDVFSY--K 345 F G +F + HQ G Y KG F F + DG L+L+ G YA+N D++ + Sbjct: 1455 LVFDKPLTSGQSFGMAHQSGAYVKGNMFSFTATADGKGLVLTNKGGSYASNLDMYQFGGS 1514 Query: 346 SPTATQNYDIGNVRLLYQVTTDNPSSQPTIKVSYDGTKASAGDVIGLYEGDKLLGSRTLT 405 + NYDIGN+R+LYQV T + PT+KV ++ ++AS GD++ + G+ + S+TLT Sbjct: 1515 EQSTNGNYDIGNIRILYQVDTGMSNLNPTVKVKFNASEASVGDIVSVRSGNSV-ASKTLT 1573 Query: 406 AADVGTAGMTLDVTTTGSLSAGEHVIQTRFSDTAGNLVVGNDV--HVTLAAGAVAPMLGN 463 A D+ + ++ +T S+ ++ + T + + +GN+ N++ + VAP+L + Sbjct: 1574 ANDLASPEASVSLTLAESILGSDNYLYTEYKEASGNIASANEITAYADRPQSVVAPVLSD 1633 Query: 464 LRVNGETPD---IQPINASSTKYAMIAETPTSAATLTGLDQNLTFSGTVGGAGTNDTYLI 520 L V +P+ +Q +N S+T+YA I++ P + ++ L F G VG G++D YLI Sbjct: 1634 LNV--ASPNKGGVQALNDSTTQYASISD-PGAPWAPGNYERGLLFGGKVGAEGSSDKYLI 1690 Query: 521 SVSMGGKVIVFGEVKAGDFSLTTPANVLAPGMYHDLTITATNTSAGVNNGQTTVVQNQTL 580 +V MG KV+ F V AGDF+L++ AN++APG++ DL+ TATN ++G NNG T+ V L Sbjct: 1691 TVKMGSKVLAFDTVNAGDFTLSSAANLIAPGLHEDLSFTATNITSGNNNGMTSTVTGLKL 1750 Query: 581 GWYWVPQKLESLKGGAGDDQIQLSVTAGGANTVVQTGIGKDTLVLGGFGTSDSSRLVATV 640 G YW Q L +GG G+D L T G NT++QT G DTL LG FG AT+ Sbjct: 1751 GHYWATQFLGDTRGGHGNDNFLLGATKNGLNTLIQTNGGDDTLTLGAFGK--QGNFAATI 1808 Query: 641 SDFTLGQDKVAVFAQNVTKDNLGTYVQ--ASSYNTSSTKLMVDLDGAGAGNTVYTLYLQN 698 +DFT G DK+AVF +++ NL +V+ A + TK++VDLDGA AGN YTL+LQN Sbjct: 1809 TDFTAGADKIAVFGKSIDLGNLQQFVKEVAPIQGGNGTKVVVDLDGAAAGNQTYTLHLQN 1868 Query: 699 LAYNPGNTHTIFGV 712 +AY P NTHT+FG+ Sbjct: 1869 VAYQPANTHTLFGI 1882 >gi|300313785|ref|YP_003777877.1| autotransporter adhesin protein [Herbaspirillum seropedicae SmR1] Length = 3631 Score = 436 bits (1122), Expect = e-123, Method: Compositional matrix adjust. Identities = 282/716 (39%), Positives = 422/716 (58%), Gaps = 33/716 (4%) Query: 17 RTAQVSLVSASGETGNPSTASIRFDTHAPVLDADTSRVDVQTSSFKTLNGAKAVAGEGLF 76 R+ ++LV+A+G +G S A++ DT APVLD D + +Q S K++ +A+ G LF Sbjct: 2929 RSMDITLVTATG-SGTTSRATLVLDTRAPVLDLDANTPGIQIQSSKSVRLDEAITGVKLF 2987 Query: 77 AHDIVVWPTSDISSIVIRMDGPQL-NLQHDKLLLDVPLALDASLPSVTGKTVGGVAGLTY 135 ++ DI S+ R+ P+ + +D L+L S +G ++GGV+GL Sbjct: 2988 NGEMSAPIAQDIGSL--RLTLPRSGDASNDDLILGNERFATRSNIDFSG-SLGGVSGLEL 3044 Query: 136 GYEGSGHRLSISKSSGAALSGLEARAILKAIQFQNATPSAGDRSASITLTDQAGNSNTVV 195 Y S + +IS++ GA + GL+ +AIL++++++ A SAG R+ ++ + DQAGN Sbjct: 3045 HYAASTGQAAISRTGGAPMDGLQVKAILESLKYRFA--SAGARNIAVEVADQAGNVARGD 3102 Query: 196 ANLSVDLTLPASISAALVSGKQVSYKTLTVPDIMGS-----TNPHNLHSGESADLTSLLP 250 L++D T+PA ++ +++ Q ++ + +I GS T+PHNL+ GE LT+L Sbjct: 3103 VTLTLDTTVPAQLTTTMLAETQKAFGVAKMENIFGSPFFPITSPHNLNKGEGVALTNLPS 3162 Query: 251 ADMTAASFISSLKGMYAEWGGMAITTNDNTTEKHFNSVYSFPNGFGLGTTFAVVHQGGPY 310 AASF+ +++G+ AEWGG+A+T N N++ + S F G AV+ Q G Sbjct: 3163 GFANAASFLGAIRGVSAEWGGVALTGNPNSSNPNLKSYTLFNQPLNPGQEVAVMQQAGSD 3222 Query: 311 AKGE--NFKFVSPDGHQ---LLLSALDGFYAANTDVFSYKSPTATQN----YDIGNVRLL 361 A G +F V G Q + L+ L F + D+ Y+S T+ YD+ NV LL Sbjct: 3223 ALGSWLSFTLVRQAGRQADDVYLNHLGSFVLNHLDL--YRSETSRDKSQSGYDLANVGLL 3280 Query: 362 YQVTTDNPSSQPTIKVSYDGTKASAGDVIGLYEGDKLLGSRTLTAADVGTAGMTLDVTTT 421 YQ+ T P+ PT++V YD ++A+ GDV+ L+EG +L + LTAAD+G+ T+++T Sbjct: 3281 YQIDTHRPNKTPTLQVGYDASRAAVGDVVALFEGGTMLARKVLTAADLGSGTKTVNLTVA 3340 Query: 422 GSLSAGEHVIQTRFSDTAGNLVVGNDVHVTLAAGAVAPMLGNL--RVNGETP-DIQPINA 478 SL+ GEH I R++D AGN V G HV++A G L +L R + + P +Q +NA Sbjct: 3341 QSLAPGEHDIVARYTDLAGNTVNGTAQHVSVAGGGDPVTLTDLAVRSSKQAPAAVQALNA 3400 Query: 479 SSTKYAMIAETPTSAATLTGLDQN-LTFSGTVGGAGTNDTYLISVSMGGKVIVFGEVKAG 537 S +YA+I + TS ++G + SG VGG +D Y+++V MGGKV+ F EV AG Sbjct: 3401 SENRYAVINDLDTS--DISGHSASGPVISGKVGGGRDSDRYVVTVEMGGKVLAFDEVGAG 3458 Query: 538 DFSLTTPANVLAPGMYHDLTITATNTSAGVNNGQTTVVQNQTLGWYWVPQKLESLKGGAG 597 DFS++ A LAPG+Y DLT+TA+ S G GQ+T VQ LGWYW Q + + GG G Sbjct: 3459 DFSISLSAGSLAPGLYRDLTVTASRAS-GNEPGQSTAVQGLKLGWYWAAQSVSDIFGGNG 3517 Query: 598 DDQIQLSVTAGGANTVVQTGIGKDTLVLGGFGTSDSSRLVATVSDFTLGQDKVAVFAQNV 657 +D I + T A + VQTG G+D +++G FG SD+ L ATV DF LG DKV VF Q++ Sbjct: 3518 NDDIVIGTTHYSAASFVQTGAGQDKVIVGAFGRSDN--LAATVGDFVLGVDKVEVFNQSL 3575 Query: 658 TKDNLGTYVQASS-YNTSSTKLMVDLDGAGAGNTVYTLYLQNLAYNPGNTHTIFGV 712 T+ NL +V AS+ N + T+L +DLDGAG G YTL LQN+AYN NT TIFG+ Sbjct: 3576 TQANLSRFVTASAGVNPNDTRLSIDLDGAGPGTLTYTLMLQNVAYNSANTATIFGL 3631 Score = 57.4 bits (137), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 54/187 (28%), Positives = 92/187 (49%), Gaps = 7/187 (3%) Query: 20 QVSLVSASGETGNPSTASIRFDTHAP-VLDADTSRVDVQTSSFKTLNGAKAVAGEGLFAH 78 Q+ V A G + +R T AP +LD D VQ S ++ A + G+ Sbjct: 2600 QLKQVDAQGRISEAADLKLRMVTTAPSLLDLDAFTDGVQASRSIVVSNADVSSASGVALM 2659 Query: 79 DIVVWPT-SDISSIVIRMDGPQLNLQHDKLLLDVPLALDASLPSVTGKTVGGVAGLTYGY 137 V P SDI I + D + D LLLD + ++ +L V +++GGV GL+Y Sbjct: 2660 PQVATPKASDIRFIELVSDNAGAS-PVDSLLLDRAVGINNNLAQVDNRSIGGVTGLSYKV 2718 Query: 138 EGSGHR--LSISKSSGAALSGLEARAILKAIQFQNATPSAGD--RSASITLTDQAGNSNT 193 + ++++K+ G+A +G EAR +L++++ QN G RS I+L D +G+ + Sbjct: 2719 STVAKKSTVTLTKTDGSAFTGDEARNVLQSLRLQNLGFDTGKKSRSVDISLGDGSGHRSA 2778 Query: 194 VVANLSV 200 + ++V Sbjct: 2779 DLNRVTV 2785 >gi|300310421|ref|YP_003774513.1| hypothetical protein Hsero_1088 [Herbaspirillum seropedicae SmR1] Length = 8016 Score = 388 bits (997), Expect = e-109, Method: Compositional matrix adjust. Identities = 285/747 (38%), Positives = 404/747 (54%), Gaps = 47/747 (6%) Query: 1 VVQAIKLAGSSTHDGLRTAQVSLVSASGETGNPSTASIRFDTHAPVLDADTSRVDVQTSS 60 +V+++ L+ + DG R A++ + G G STA I DT APVLD D VQTSS Sbjct: 7282 IVESLALSNPAAKDGERVAELLVFRTDGSKGPVSTARIILDTVAPVLDLDAGVAGVQTSS 7341 Query: 61 FKTLNGAKAVAGEGLFAHDIVVWPTSDISSIVIRMDGPQLNLQHD-----KLLLDVPLAL 115 K+ A AG GLF I V +DI I + G L D LL V L L Sbjct: 7342 AKSAVLASVAAGTGLFGKPIAVAAATDIDLIRLDYTGRTSELLKDFLSTASLLPAVALPL 7401 Query: 116 DASLPSVTGK---TVGGVAGLTYGYEGSG---HRLSISKSSGAALSGLEARAILKAIQFQ 169 A TG+ + GV+ L Y G R+ SK SG A++ +EA+ IL+A++F+ Sbjct: 7402 GA-----TGRGNIDISGVSRLKYALSSPGSVSKRIEFSKESGEAITSIEAKTILEALRFK 7456 Query: 170 NATPSAGDRSASITLTDQAGNSNTVV-ANLSVDLTLPASIS-AALVSGKQVSYKTLTV-P 226 + R + L D+AGN++ +V + LS+D P ++S L G Q+S+ LT+ Sbjct: 7457 TTSTDTTSRRFDVVLVDKAGNASALVQSTLSIDTRTPPTLSMTKLEEGNQISFGMLTLNT 7516 Query: 227 DIMGSTNPHNLHSGESADLTSLLPADMTAASFISSLKGMYAEWGGMAITTNDNTTEKHFN 286 D+ N NL GES LT LPA+ T SF+S+LK + ++WGG I+ + + E + Sbjct: 7517 DLGNDVNTGNLKKGESVALT--LPAEFTPTSFLSALKAISSDWGGPGISGSSSVIEDRYR 7574 Query: 287 SVYSFPNGFGLGTTFAVVHQGGPYAKGENFKFVSPDGHQLLLSALDGFYAANTDVFSY-- 344 S S L ++F++ HQ KG +F S G+ L GF ++D++ + Sbjct: 7575 SYTSVAAPSTLTSSFSMAHQSHSSVKGNQVQF-SIAGNTLSFINNGGFAVLDSDIYRFTR 7633 Query: 345 ---KSPTATQNYDIGNVRLLYQVTTDNPSSQPTIKVSYDGTKASAGDVIGLYEGDKLLGS 401 +S T YD+GN+RLLYQ TT N +S PT VSYD + + GDVIGLYEG+KLL S Sbjct: 7634 FNGESKDLTGGYDMGNLRLLYQTTTANVNSTPTFAVSYDRARVAVGDVIGLYEGNKLLAS 7693 Query: 402 RTLTAADVGTAG-MTLDVTTTGSLSAGEHVIQTRFSDTAGNLVVGNDVHVTLAAGAVAPM 460 +TL +ADVG G TL++ + SL+ G H I ++++ G V + A P+ Sbjct: 7694 KTLESADVGGTGTATLNLKISDSLAPGNHAIVSKYTSATGLTSQSTATTVNITGDAKTPL 7753 Query: 461 LGNLRVN---GETPDIQPINASSTKYAMIAETPTSAATLTGLDQNLTFSGTVGGAGTN-- 515 L +L+V GE + I Y I + P T D+ L FSG+V G Sbjct: 7754 LTDLKVKAGYGEESTAKAILLGGDAYTSITD-PGRVGTEGTYDKGLIFSGSVNTPGLTGP 7812 Query: 516 DTYLISVSMGGKVIVF--------GEVKAGDFSLTTPANVLAPGMYHDLTITATNTSAG- 566 YL++VS+GGK++ + + F+L +N+LAPG+Y DLT T TN + G Sbjct: 7813 QKYLVTVSLGGKLLGYDTFTLSTTDDPATSKFTLQAASNLLAPGLYRDLTATVTNVTEGS 7872 Query: 567 VNNGQTTVVQNQTLGWYWVPQKLESLKGGAGDDQIQLSVTAGGANTVVQTGIGKDTLVLG 626 ++NGQT+V+++ +LGWYWV Q + +L GG G+D + L + + V TG G TL LG Sbjct: 7873 IHNGQTSVIKDASLGWYWVGQGMGNLIGGQGNDGMLLGASQTTSPFTVTTGAGAGTLTLG 7932 Query: 627 GFGTSDSSRLVATVSDFTLGQDKVAVFAQNVTKDNLGTYVQA-SSYNTSSTKLMVDLDGA 685 FG SS L ATV+DF LG DKV V+ Q++T NL ++ A +S N ST L VDLDG Sbjct: 7933 AFGK--SSNLTATVTDFQLGLDKVQVWGQSITSANLSSFASATASDNGRSTTLTVDLDGV 7990 Query: 686 GAGNTVYTLYLQNLAYNPGNTHTIFGV 712 G + YTL LQN+A+N NT TIFGV Sbjct: 7991 RGGLS-YTLQLQNVAFNAANTQTIFGV 8016 Score = 73.9 bits (180), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 61/220 (27%), Positives = 105/220 (47%), Gaps = 2/220 (0%) Query: 1 VVQAIKLAGSSTHDGLRTAQVSLVSASGETGNPSTASIRFDTHAPVLDADTSRVDVQTSS 60 ++++I+L +G RT ++LV +G PSTA+I + LD D + + Q +S Sbjct: 7122 IIRSIRLHNPGFTEGERTMTITLVDGAGRESLPSTATISVTSPFMWLDLDPNTAETQFNS 7181 Query: 61 FKTLNGAKAVAGEGLFAHDIVVWPTSDISSIVIRMDGPQLNLQHDKLLLDVPLALDASLP 120 L A ++ F I P + + + +++ G L++ +DKL LDV L L+A Sbjct: 7182 TNYLRSAASLVNGVAFDSQIAA-PYNTVRGLEVKLSGAGLDVVNDKLKLDVSLNLNADSR 7240 Query: 121 SVTGKTVGGVAGLTYGYEGSGHRLSISKSSGAALSGLEARAILKAIQFQNATPSAGDRSA 180 GK +G + GL Y Y L I ++G L+ + +AI++++ N G+R A Sbjct: 7241 YQIGKVLGNITGLGYEYTADTRTLRIVDTTGLGLNDTKIQAIVESLALSNPAAKDGERVA 7300 Query: 181 SITLTDQAGNSNTV-VANLSVDLTLPASISAALVSGKQVS 219 + + G+ V A + +D P A V+G Q S Sbjct: 7301 ELLVFRTDGSKGPVSTARIILDTVAPVLDLDAGVAGVQTS 7340 Database: BlastDatabases/689/689 Posted date: Apr 10, 2011 12:15 AM Number of letters in database: 1,619,870 Number of sequences in database: 4735 Lambda K H 0.312 0.129 0.361 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 4735 Number of Hits to DB: 2,249,880 Number of extensions: 98404 Number of successful extensions: 321 Number of sequences better than 1.0e-08: 4 Number of HSP's gapped: 288 Number of HSP's successfully gapped: 10 Length of query: 712 Length of database: 1,619,870 Length adjustment: 92 Effective length of query: 620 Effective length of database: 1,184,250 Effective search space: 734235000 Effective search space used: 734235000 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.9 bits) S2: 134 (56.2 bits)