BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.0033.p (422 letters) Database: BlastDatabases/689/689 4735 sequences; 1,619,870 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|300310367|ref|YP_003774459.1| sugar ABC transporter ATPase [H... 712 0.0 gi|300310063|ref|YP_003774155.1| sugar ABC transporter ATPase [H... 269 3e-73 gi|300310382|ref|YP_003774474.1| sugar ABC transporter ATPase [H... 257 2e-69 gi|300310396|ref|YP_003774488.1| sugar ABC transporter ATPase [H... 232 6e-62 gi|300313728|ref|YP_003777820.1| sugar ABC transporter ATPase [H... 231 1e-61 >gi|300310367|ref|YP_003774459.1| sugar ABC transporter ATPase [Herbaspirillum seropedicae SmR1] Length = 516 Score = 712 bits (1838), Expect = 0.0, Method: Compositional matrix adjust. Identities = 357/378 (94%), Positives = 366/378 (96%) Query: 45 DIDVGALLSSYPLAIQQMVAISRALSVSAKVLILDEPTSSLDEAEVQQLFKVLRRLREQG 104 DIDV A LSSYPLAIQQMVAISRALSVSAKVLILDEPTSSLDEAEVQQLFKVLRRLREQG Sbjct: 139 DIDVAAPLSSYPLAIQQMVAISRALSVSAKVLILDEPTSSLDEAEVQQLFKVLRRLREQG 198 Query: 105 MAILFVTHFLDQTYDISDRITVLRNGVREGEYLVGDLSRLDLVNKMVGVTAVDHRKVEAG 164 MAILFVTHFLDQTY+ISDRITVLRNGVREGEYLV +LSRLDLVNKMVGVTAVDHRKVEAG Sbjct: 199 MAILFVTHFLDQTYEISDRITVLRNGVREGEYLVSELSRLDLVNKMVGVTAVDHRKVEAG 258 Query: 165 AEALAAGLSADEAGKGEVFLQADGFGRRGVLSPQDLELRRGEVFGLCGLLGSGRTEMARL 224 AEALA+ LS D A G VFLQA+GFGRRGVL+PQDL+LRRGEVFGLCGLLGSGRTEMARL Sbjct: 259 AEALASELSTDAAAAGAVFLQAEGFGRRGVLAPQDLQLRRGEVFGLCGLLGSGRTEMARL 318 Query: 225 LFGADRADCGQLRIEGRSVKLDNPRDAIAAGIGFCSEDRKKEGAILELSVRENIILALQA 284 LFGADRADCGQLRIEG+ V+L+ PRDAIAAGIGFCSEDRKKEGAILELSVRENIILALQA Sbjct: 319 LFGADRADCGQLRIEGKEVRLNVPRDAIAAGIGFCSEDRKKEGAILELSVRENIILALQA 378 Query: 285 RQGLFRVLPRKRQNQIAADYVKWLGIKTADLETPIGLLSGGNQQKALLARWLATDPGMLI 344 RQGLFRVLPRKRQNQIAADYVKWLGIKTADLETPIGLLSGGNQQKALLARWLATDPGMLI Sbjct: 379 RQGLFRVLPRKRQNQIAADYVKWLGIKTADLETPIGLLSGGNQQKALLARWLATDPGMLI 438 Query: 345 LDEPTRGIDVRAKQEIMDFVIAMCRKGMSILFISSEIPEVLRCSDRMLVLRDRRACGEYR 404 LDEPTRGIDVRAKQEIMDFVIAMCRKGMSILFISSEIPEVLRCSDRMLVLRDRRACGEYR Sbjct: 439 LDEPTRGIDVRAKQEIMDFVIAMCRKGMSILFISSEIPEVLRCSDRMLVLRDRRACGEYR 498 Query: 405 RGELDEQSVLQVIAGEAA 422 RGELDEQSVLQVIAGE A Sbjct: 499 RGELDEQSVLQVIAGETA 516 Score = 72.0 bits (175), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 66/232 (28%), Positives = 113/232 (48%), Gaps = 8/232 (3%) Query: 193 GVLSPQDLELR--RGEVFGLCGLLGSGRTEMARLLFGADRADCGQLRIEGRSVKLDNPRD 250 GV + D+ LR GEV L G G+G++ + ++L G D G++ ++GR++ + + Sbjct: 24 GVKALTDVGLRLFPGEVHTLMGQNGAGKSTLIKVLTGVHEPDGGKIELDGRAIAPASTLE 83 Query: 251 AIAAGIGFCSEDRKKEGAILELSVRENIILALQARQGLFRVLPRKRQNQIAADYVKWLGI 310 A A GI S ++ LSV ENI + + F + K + + ++ L I Sbjct: 84 AQALGI---STVYQEVNLCPNLSVAENIFVGRYPTR--FGRIDWKSVHTQSRQLLQQLQI 138 Query: 311 KTADLETPIGLLSGGNQQKALLARWLATDPGMLILDEPTRGIDVRAKQEIMDFVIAMCRK 370 D+ P+ QQ ++R L+ +LILDEPT +D Q++ + + + Sbjct: 139 DI-DVAAPLSSYPLAIQQMVAISRALSVSAKVLILDEPTSSLDEAEVQQLFKVLRRLREQ 197 Query: 371 GMSILFISSEIPEVLRCSDRMLVLRDRRACGEYRRGELDEQSVLQVIAGEAA 422 GM+ILF++ + + SDR+ VLR+ GEY EL ++ + G A Sbjct: 198 GMAILFVTHFLDQTYEISDRITVLRNGVREGEYLVSELSRLDLVNKMVGVTA 249 >gi|300310063|ref|YP_003774155.1| sugar ABC transporter ATPase [Herbaspirillum seropedicae SmR1] Length = 521 Score = 269 bits (688), Expect = 3e-73, Method: Compositional matrix adjust. Identities = 144/360 (40%), Positives = 225/360 (62%), Gaps = 9/360 (2%) Query: 57 LAIQQMVAISRALSVSAKVLILDEPTSSLDEAEVQQLFKVLRRLREQGMAILFVTHFLDQ 116 +A QQ V I+RAL ++++I+DEPT++L E E +QLF V+RRLR++G+AI++++H + + Sbjct: 146 IAEQQQVEIARALVHRSRIVIMDEPTAALSERETEQLFNVVRRLRDEGLAIIYISHRMAE 205 Query: 117 TYDISDRITVLRNGVREGEYLVGDLSRLDLVNKMVGVTAVDHRKVEAGAEALAAGLSADE 176 Y ++DR+TVLR+G GE + ++ +V MVG + + + + A A AA L Sbjct: 206 VYALADRVTVLRDGSFVGELVRDEIDSERIVQMMVGRSLSEFYQHQRIAPADAAQLP--- 262 Query: 177 AGKGEVFLQADGFGRRGVLSPQDLELRRGEVFGLCGLLGSGRTEMARLLFGADRADCGQL 236 +Q G + P ++R GEV G GL+G+GRTE+ARLLFGAD G + Sbjct: 263 -----TVMQVRALAG-GKIRPASFDVRAGEVLGFAGLVGAGRTELARLLFGADPRSGGDI 316 Query: 237 RIEGRSVKLDNPRDAIAAGIGFCSEDRKKEGAILELSVRENIILALQARQGLFRVLPRKR 296 +EGR V +D PR A+ AGI + EDRK +G L+++V N + + +R ++ + Sbjct: 317 LLEGRPVHIDQPRAAMRAGIAYVPEDRKGQGLFLQMAVAANATMNVASRHTRLGLVRSRS 376 Query: 297 QNQIAADYVKWLGIKTADLETPIGLLSGGNQQKALLARWLATDPGMLILDEPTRGIDVRA 356 +A ++ L +K A ETP+G LSGGNQQK LLARWL P +LILDEPTRG+D+ A Sbjct: 377 LGGVARAAIQRLNVKVAHPETPVGKLSGGNQQKVLLARWLEIAPKVLILDEPTRGVDIYA 436 Query: 357 KQEIMDFVIAMCRKGMSILFISSEIPEVLRCSDRMLVLRDRRACGEYRRGELDEQSVLQV 416 K EI V + +G++++ ISSE+PEV+ DR+LV+R+ GE + +++++++ Sbjct: 437 KSEIYQLVHRLASQGVAVVVISSELPEVIGICDRVLVMREGMITGELAGAAITQENIMRL 496 Score = 96.7 bits (239), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 72/236 (30%), Positives = 120/236 (50%), Gaps = 11/236 (4%) Query: 189 FGRRGVLSPQDLELRRGEVFGLCGLLGSGRTEMARLLFGADRADCGQLRIEGRSVKLDNP 248 FG LS L +R GE+ L G G+G++ + ++L G D G++ ++GR V L +P Sbjct: 16 FGATLALSDMHLTIRPGEIHALMGENGAGKSTLMKVLSGVHAPDQGEILLDGRPVALRDP 75 Query: 249 RDAIAAGIGFCSEDRKKEGAILELSVRENIILA--LQARQGLF-RVLPRKRQNQIAADYV 305 + AAGI ++ I SV N+ + L+ R GL R R + + Sbjct: 76 GASRAAGINLIYQELAVAPNI---SVAANVFMGSELRTRLGLIDHAAMRSRTDAVLRQL- 131 Query: 306 KWLGIKTADLETPIGLLSGGNQQKALLARWLATDPGMLILDEPTRGIDVRAKQEIMDFVI 365 G +DL G LS QQ+ +AR L ++I+DEPT + R +++ + V Sbjct: 132 -GAGFGASDLA---GRLSIAEQQQVEIARALVHRSRIVIMDEPTAALSERETEQLFNVVR 187 Query: 366 AMCRKGMSILFISSEIPEVLRCSDRMLVLRDRRACGEYRRGELDEQSVLQVIAGEA 421 + +G++I++IS + EV +DR+ VLRD GE R E+D + ++Q++ G + Sbjct: 188 RLRDEGLAIIYISHRMAEVYALADRVTVLRDGSFVGELVRDEIDSERIVQMMVGRS 243 >gi|300310382|ref|YP_003774474.1| sugar ABC transporter ATPase [Herbaspirillum seropedicae SmR1] Length = 520 Score = 257 bits (656), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 143/382 (37%), Positives = 227/382 (59%), Gaps = 12/382 (3%) Query: 35 AAAAADRPXRDIDVGALLSSYPLAIQQMVAISRALSVSAKVLILDEPTSSLDEAEVQQLF 94 AAA R D+D + +A QQMV I++ALS ++VLI+DEPT++L+ AE+ +LF Sbjct: 141 AAAIFARMRLDMDPSTPVGELTVARQQMVEIAKALSFDSRVLIMDEPTAALNNAEIAELF 200 Query: 95 KVLRRLREQGMAILFVTHFLDQTYDISDRITVLRNGVREGEYLVGDLSRLDLVNKMVGVT 154 +++R L+ QG+ I++++H +D+ I+DR++V+R+G + + S +++ MVG Sbjct: 201 RIIRDLQAQGVGIVYISHKMDELRQIADRVSVMRDGKYIATVPMQETSMDTIISMMVGRA 260 Query: 155 AVDHRKVEAGAEALAAGLSADEAGKGEVFLQADGFGRRGVLSPQDLELRRGEVFGLCGLL 214 +++ + + +V L+ G R + LR+GE+ G GL+ Sbjct: 261 LDGEQRIPP------------DTSRNDVVLEVRGLNRGRAIRDVSFTLRKGEILGFAGLM 308 Query: 215 GSGRTEMARLLFGADRADCGQLRIEGRSVKLDNPRDAIAAGIGFCSEDRKKEGAILELSV 274 G+GRTE+AR +FGAD + G++ I G + +P DA+A GIG+ SEDRK G + + V Sbjct: 309 GAGRTEVARAIFGADPLEAGEIIIHGGKAVIKSPADAVAHGIGYLSEDRKHFGLAVGMDV 368 Query: 275 RENIILALQARQGLFRVLPRKRQNQIAADYVKWLGIKTADLETPIGLLSGGNQQKALLAR 334 + NI L+ R + ++ + A YV+ L IKT +E LLSGGNQQK ++A+ Sbjct: 369 QANIALSSMGRFTRVGFMDQRAIREAAQMYVRQLAIKTPSVEQQARLLSGGNQQKIVIAK 428 Query: 335 WLATDPGMLILDEPTRGIDVRAKQEIMDFVIAMCRKGMSILFISSEIPEVLRCSDRMLVL 394 WL D +L DEPTRGIDV AK EI + A+ +G +I+ ISSE+PEVLR S R+LV+ Sbjct: 429 WLLRDCDILFFDEPTRGIDVGAKSEIYKLLDALAEQGKAIVMISSELPEVLRMSHRVLVM 488 Query: 395 RDRRACGEYRRGELDEQSVLQV 416 + R GE R + ++ ++Q+ Sbjct: 489 CEGRITGELARADATQEKIMQL 510 Score = 90.9 bits (224), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 63/231 (27%), Positives = 119/231 (51%), Gaps = 6/231 (2%) Query: 193 GVLSPQD--LELRRGEVFGLCGLLGSGRTEMARLLFGADRADCGQLRIEGRSVKLDNPRD 250 GVL+ + EL GEV L G G+G++ + ++L G + D G + ++G+ V++ PR Sbjct: 34 GVLALDNCQFELAAGEVHALMGENGAGKSTLMKILSGVYQRDSGDILLDGKPVEITEPRQ 93 Query: 251 AIAAGIGFCSEDRKKEGAILELSVRENIILALQARQGLFRVLPRKRQNQIAADYVKWLGI 310 A A GIG ++ + LS +NI + + R+ + + N+ AA + + Sbjct: 94 AQALGIGIIHQELN---LMNHLSAAQNIFIGREPRKAMGLFIDEDELNRQAAAIFARMRL 150 Query: 311 KTADLETPIGLLSGGNQQKALLARWLATDPGMLILDEPTRGIDVRAKQEIMDFVIAMCRK 370 D TP+G L+ QQ +A+ L+ D +LI+DEPT ++ E+ + + + Sbjct: 151 DM-DPSTPVGELTVARQQMVEIAKALSFDSRVLIMDEPTAALNNAEIAELFRIIRDLQAQ 209 Query: 371 GMSILFISSEIPEVLRCSDRMLVLRDRRACGEYRRGELDEQSVLQVIAGEA 421 G+ I++IS ++ E+ + +DR+ V+RD + E +++ ++ G A Sbjct: 210 GVGIVYISHKMDELRQIADRVSVMRDGKYIATVPMQETSMDTIISMMVGRA 260 >gi|300310396|ref|YP_003774488.1| sugar ABC transporter ATPase [Herbaspirillum seropedicae SmR1] Length = 506 Score = 232 bits (591), Expect = 6e-62, Method: Compositional matrix adjust. Identities = 135/342 (39%), Positives = 197/342 (57%), Gaps = 14/342 (4%) Query: 57 LAIQQMVAISRALSVSAKVLILDEPTSSLDEAEVQQLFKVLRRLREQGMAILFVTHFLDQ 116 +A QQ V I++AL++ A++L+LDEPT++L AEV+ LF V+R LR QG+AI+F++H L++ Sbjct: 145 VAQQQFVEIAKALALDARILVLDEPTATLTPAEVEHLFAVMRSLRAQGVAIIFISHHLEE 204 Query: 117 TYDISDRITVLRNGVREGEYLVGDLSRLDLVNKMVGVTAVDHRKVEAGAEALAAGLSADE 176 ++I DRITVLR+G ++ + LV MVG R++E + Sbjct: 205 IFEICDRITVLRDGAYVATCATAEVDQARLVEMMVG------RRIE---NCFPPKPAKGG 255 Query: 177 AGKGEVFLQADGFGRRGVLSPQDLELRRGEVFGLCGLLGSGRTEMARLLFGADRADCGQL 236 G+GEV L+ R +LRRGE+ G GL+GSGRTE + GA A +L Sbjct: 256 EGEGEVVLEVHALQLRRQAPVSQFQLRRGEILGFAGLVGSGRTETVLAMLGAHAALSCKL 315 Query: 237 RIEGRSVKLDNPRDAIAAGIGFCSEDRKKEGAILELSVRENIILALQARQ---GLFRVLP 293 + G ++ +P A+ AGIG E RK++G I S+ N+ L + GLF L Sbjct: 316 SMHGVPLRFADPAQALQAGIGLLPESRKEQGLITSFSILHNVSLNNYGKYRLGGLF--LD 373 Query: 294 RKRQNQIAADYVKWLGIKTADLETPIGLLSGGNQQKALLARWLATDPGMLILDEPTRGID 353 R+R+ Q ++ + +K + + LSGGNQQK ++ARW+ +LI DEPTRGID Sbjct: 374 RRREQQATEAAMQRVRVKAPGAQVRVDTLSGGNQQKVVIARWINHAMKVLIFDEPTRGID 433 Query: 354 VRAKQEIMDFVIAMCRKGMSILFISSEIPEVLRCSDRMLVLR 395 V AK EI + +G SIL ISSE+PEV+ +DR+ V R Sbjct: 434 VGAKSEIYQLMREFTAQGYSILMISSELPEVVGMADRVCVFR 475 Score = 106 bits (264), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 73/233 (31%), Positives = 125/233 (53%), Gaps = 9/233 (3%) Query: 189 FGRRGVLSPQDLELRRGEVFGLCGLLGSGRTEMARLLFGADRADCGQLRIEGRSVKLDNP 248 FG VL DLE+R GEV L G G+G++ + ++L G R D G++RI+G+ + D+ Sbjct: 15 FGPVTVLRGVDLEVRAGEVHALLGENGAGKSTLMKILCGIVRPDAGEIRIDGQPCRFDSY 74 Query: 249 RDAIAAGIGFCSEDRKKEGAILELSVRENIILA--LQARQGLFRVLPRKRQNQIAADYVK 306 R AIA G+G ++ I L +N+ LA L++R G + +R+ Q + + Sbjct: 75 RAAIAGGVGVVFQEFS---LIPYLDAVDNMFLARELRSRWGWLQRAAMRRRAQ---EIIG 128 Query: 307 WLGIKTADLETPIGLLSGGNQQKALLARWLATDPGMLILDEPTRGIDVRAKQEIMDFVIA 366 LG+ L+ P+ LS QQ +A+ LA D +L+LDEPT + + + + + Sbjct: 129 QLGVAI-PLDVPVCKLSVAQQQFVEIAKALALDARILVLDEPTATLTPAEVEHLFAVMRS 187 Query: 367 MCRKGMSILFISSEIPEVLRCSDRMLVLRDRRACGEYRRGELDEQSVLQVIAG 419 + +G++I+FIS + E+ DR+ VLRD E+D+ +++++ G Sbjct: 188 LRAQGVAIIFISHHLEEIFEICDRITVLRDGAYVATCATAEVDQARLVEMMVG 240 Score = 56.2 bits (134), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 25/71 (35%), Positives = 43/71 (60%) Query: 60 QQMVAISRALSVSAKVLILDEPTSSLDEAEVQQLFKVLRRLREQGMAILFVTHFLDQTYD 119 QQ V I+R ++ + KVLI DEPT +D ++++++R QG +IL ++ L + Sbjct: 407 QQKVVIARWINHAMKVLIFDEPTRGIDVGAKSEIYQLMREFTAQGYSILMISSELPEVVG 466 Query: 120 ISDRITVLRNG 130 ++DR+ V R G Sbjct: 467 MADRVCVFRGG 477 >gi|300313728|ref|YP_003777820.1| sugar ABC transporter ATPase [Herbaspirillum seropedicae SmR1] Length = 546 Score = 231 bits (588), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 143/396 (36%), Positives = 224/396 (56%), Gaps = 18/396 (4%) Query: 12 RRPLSPPFRPHRLEERACTVEAIAAAAADRPXRDIDVGALLSSYPLAIQQMVAISRALSV 71 R+PL P R++ R EA A A R D+ V A + +A + V I+RALS Sbjct: 135 RQPLCG--TPRRIDWRRMEDEARALFA--RLEVDLPVRARVKDLSVAQRHFVEIARALSQ 190 Query: 72 SAKVLILDEPTSSLDEAEVQQLFKVLRRLREQGMAILFVTHFLDQTYDISDRITVLRNG- 130 A+V+I+DEPT++L E+ +L++++ +LR G A++F++H D+ Y ++DR TVLR+G Sbjct: 191 QAQVVIMDEPTAALSHHEIGELYRIIGQLRRAGTAVIFISHKFDEIYAVADRYTVLRDGR 250 Query: 131 -VREGEYLVGDLSRLDLVNKMVGVTAVDHRKVEAGAEALAAGLSADEAGKGEVFLQADGF 189 + GE + D++ LV MVG R+V + + S E V L+ Sbjct: 251 FIASGE--LADITEQQLVALMVG------REV---GQVFSRAASNTEDQTAPV-LEVKHL 298 Query: 190 GRRGVLSPQDLELRRGEVFGLCGLLGSGRTEMARLLFGADRADCGQLRIEGRSVKLDNPR 249 +R GE+ G GL+G+GR+E+ LFG G + I+GR VKL +P Sbjct: 299 SHPSEFDDVSFAVRPGEILGFYGLVGAGRSEVMHALFGLSPEAQGAVWIDGREVKLCSPA 358 Query: 250 DAIAAGIGFCSEDRKKEGAILELSVRENIILALQARQGLFRVLPRKRQNQIAADYVKWLG 309 AIA G+ + EDR+++GA+L L + +NI L + G F R+R+ IA + L Sbjct: 359 QAIAHGLAYVPEDRQRQGALLSLPIFQNITLPVLPGIGFFLRRHRRREIDIARRLCEQLE 418 Query: 310 IKTADLETPIGLLSGGNQQKALLARWLATDPGMLILDEPTRGIDVRAKQEIMDFVIAMCR 369 +K + + LSGGNQQK +LA+WLAT P +LILDEPT+GID+ +K + F+ + Sbjct: 419 LKASHFHQHVAQLSGGNQQKVVLAKWLATQPRVLILDEPTKGIDIGSKAAVHRFIGELVA 478 Query: 370 KGMSILFISSEIPEVLRCSDRMLVLRDRRACGEYRR 405 +G++++ +SSE+PEV+ SDR++V+ R + R Sbjct: 479 QGLAVILVSSELPEVMGMSDRIVVMHQGRVQQVFSR 514 Score = 84.0 bits (206), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 67/240 (27%), Positives = 114/240 (47%), Gaps = 8/240 (3%) Query: 184 LQADGFGRR--GVLSPQD--LELRRGEVFGLCGLLGSGRTEMARLLFGADRADCGQLRIE 239 L G G+R GV++ QD +R GEV L G G+G++ + ++L G + D G + + Sbjct: 36 LSLSGIGKRFQGVVALQDVGFTVRPGEVMALLGENGAGKSTLVKILTGIHQPDEGSIHLG 95 Query: 240 GRSVKLDNPRDAIAAGIGFCSEDRKKEGAILELSVRENIILALQARQGLFRVLPRKRQNQ 299 GR V+ + +DA+ GI ++ ELSV ENI + Q G R + +R Sbjct: 96 GREVRFASAQDAMRGGITAVHQETVM---FEELSVAENIWIGRQPLCGTPRRIDWRRMED 152 Query: 300 IAADYVKWLGIKTADLETPIGLLSGGNQQKALLARWLATDPGMLILDEPTRGIDVRAKQE 359 A L + + + LS + +AR L+ ++I+DEPT + E Sbjct: 153 EARALFARLEVDLP-VRARVKDLSVAQRHFVEIARALSQQAQVVIMDEPTAALSHHEIGE 211 Query: 360 IMDFVIAMCRKGMSILFISSEIPEVLRCSDRMLVLRDRRACGEYRRGELDEQSVLQVIAG 419 + + + R G +++FIS + E+ +DR VLRD R ++ EQ ++ ++ G Sbjct: 212 LYRIIGQLRRAGTAVIFISHKFDEIYAVADRYTVLRDGRFIASGELADITEQQLVALMVG 271 Database: BlastDatabases/689/689 Posted date: Apr 10, 2011 12:15 AM Number of letters in database: 1,619,870 Number of sequences in database: 4735 Lambda K H 0.322 0.139 0.393 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 4735 Number of Hits to DB: 1,185,351 Number of extensions: 46674 Number of successful extensions: 668 Number of sequences better than 1.0e-08: 104 Number of HSP's gapped: 570 Number of HSP's successfully gapped: 141 Length of query: 422 Length of database: 1,619,870 Length adjustment: 88 Effective length of query: 334 Effective length of database: 1,203,190 Effective search space: 401865460 Effective search space used: 401865460 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 132 (55.5 bits)