BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.5646.p (411 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_949257.1| ADP-heptose synthase [Rhodopseudomonas palustri... 513 e-143 ref|YP_001993414.1| cytidyltransferase-related domain-containing... 512 e-143 ref|YP_004107785.1| cytidyltransferase-like domain-containing pr... 509 e-142 ref|YP_487410.1| cytidyltransferase-related [Rhodopseudomonas pa... 495 e-138 ref|ZP_07374499.1| ADP-heptose synthase [Ahrensia sp. R2A130] >g... 444 e-122 >ref|NP_949257.1| ADP-heptose synthase [Rhodopseudomonas palustris CGA009] emb|CAE29361.1| possible ADP-heptose synthase [Rhodopseudomonas palustris CGA009] Length = 494 Score = 513 bits (1320), Expect = e-143, Method: Composition-based stats. Identities = 245/407 (60%), Positives = 318/407 (78%) Query: 1 MTSAPEDIIRALKPSIVVKGDEHESKFNPEQAAVDEYGGKLMFSSGEMRFSSIDLLKRDI 60 + APED I AL+PS+VVKG EHE NPE+A +D YGG+L+FSSGE+ FSS+DL+KR+ Sbjct: 86 LHDAPEDFIAALQPSVVVKGKEHEGADNPEKAVLDGYGGRLVFSSGEVAFSSLDLIKREF 145 Query: 61 LEPNLSSIVLPNDYPERHAFTMHDLRSTVEKFKGLRVAVLGDLIVDEYVSCEALGMSQED 120 E N SSIV P DYP RH F + +L++ + F LRV VLGDLIVDEY++C+ LG+SQED Sbjct: 146 REFNPSSIVKPLDYPRRHRFELLELKNVLAGFPKLRVLVLGDLIVDEYIACDPLGLSQED 205 Query: 121 PTLVVTPIMQERFIGGAGIVASHACKLGAQVNYFSVAGKDAAADFAREKLSEYHVTATLF 180 PT+VVTP+++E F+GGAGIVA HA +GAQV +V G DA ADFARE+L+ Y+V AT+ Sbjct: 206 PTIVVTPVLRELFVGGAGIVAGHAAGMGAQVALLTVGGGDAMADFARERLASYNVDATIL 265 Query: 181 EDDSRPTTLKQRFRAAGKTLLRVSHLRQHDIEPRLAQRYAEAVIATLDNCDLVIFSDFNY 240 D+SRPTT KQRFRA KTLLRVSHL+QHD++ L R E + L + DLV+FSDFNY Sbjct: 266 TDESRPTTTKQRFRAGNKTLLRVSHLKQHDVDADLQTRMLETIEHRLPSTDLVVFSDFNY 325 Query: 241 GCLPQAVVDQLVEACVERGIPFVADSQSSSQMGDVSRFRGAMLLTPTEREARLAVRDYSS 300 GCLP +V+ + +AC RG+P VADSQSSSQ+GD+SRF +L+ PTEREARLA+RD+ S Sbjct: 326 GCLPTRLVEAIGQACRARGVPMVADSQSSSQVGDISRFAEMLLIKPTEREARLAMRDFDS 385 Query: 301 GLVVLAEKLRQRSQSENIILTLGAEGILAHAQSEGELDWLTDRLPAFNSSPKDTAGAGDS 360 GLVVL E LR++++++N+ILTL AEG+L HA++ +TDRLPAFN++PKD AGAGDS Sbjct: 386 GLVVLVEALREKARAKNVILTLAAEGLLVHAETGSAGTVVTDRLPAFNTAPKDAAGAGDS 445 Query: 361 FLTCTSMAMTVGVDIWQSMYLGSIAAACQVSRVGNIPLSASDLMQEL 407 F C ++A+ +G DIW+S YL SIAAACQV R+GNIP++A D+++EL Sbjct: 446 FFVCAALALAIGTDIWRSAYLASIAAACQVGRIGNIPVTARDIIREL 492 >ref|YP_001993414.1| cytidyltransferase-related domain-containing protein [Rhodopseudomonas palustris TIE-1] gb|ACF02939.1| cytidyltransferase-related domain protein [Rhodopseudomonas palustris TIE-1] Length = 494 Score = 512 bits (1319), Expect = e-143, Method: Composition-based stats. Identities = 245/407 (60%), Positives = 317/407 (77%) Query: 1 MTSAPEDIIRALKPSIVVKGDEHESKFNPEQAAVDEYGGKLMFSSGEMRFSSIDLLKRDI 60 + APED I AL+PS+VVKG EHE NPE+A +D YGG+L+FSSGE+ FSS+DL+KR+ Sbjct: 86 LHDAPEDFIAALQPSVVVKGKEHEGADNPEKAVLDGYGGRLVFSSGEVAFSSLDLIKREF 145 Query: 61 LEPNLSSIVLPNDYPERHAFTMHDLRSTVEKFKGLRVAVLGDLIVDEYVSCEALGMSQED 120 E N SSIV P DYP RH F + +L++ + F LRV VLGDLIVDEY++C+ LG+SQED Sbjct: 146 REFNPSSIVKPLDYPRRHRFELLELKNVLAGFPKLRVLVLGDLIVDEYIACDPLGLSQED 205 Query: 121 PTLVVTPIMQERFIGGAGIVASHACKLGAQVNYFSVAGKDAAADFAREKLSEYHVTATLF 180 PT+VVTP+++E F+GGAGIVA HA +GAQV +V G DA ADFARE+L+ Y+V AT+ Sbjct: 206 PTIVVTPVLRELFVGGAGIVAGHAAGMGAQVALLTVGGGDAMADFARERLASYNVDATIL 265 Query: 181 EDDSRPTTLKQRFRAAGKTLLRVSHLRQHDIEPRLAQRYAEAVIATLDNCDLVIFSDFNY 240 D+SRPTT KQRFRA KTLLRVSHL+QHD++ L R E + L + DLV+FSDFNY Sbjct: 266 TDESRPTTTKQRFRAGNKTLLRVSHLKQHDVDADLQTRMLETIEHRLPSTDLVVFSDFNY 325 Query: 241 GCLPQAVVDQLVEACVERGIPFVADSQSSSQMGDVSRFRGAMLLTPTEREARLAVRDYSS 300 GCLP +V+ + +AC RG+P VADSQSSSQ+GD+SRF +L+ PTEREARLA+RD+ S Sbjct: 326 GCLPTRLVEAIGQACRARGVPMVADSQSSSQVGDISRFTEMLLIKPTEREARLAMRDFDS 385 Query: 301 GLVVLAEKLRQRSQSENIILTLGAEGILAHAQSEGELDWLTDRLPAFNSSPKDTAGAGDS 360 GLVVL E LR++++++N+ILTL AEG+L HA++ +TDRLPAFN++PKD AGAGDS Sbjct: 386 GLVVLVEALREKARAKNVILTLAAEGLLVHAETGSAATVVTDRLPAFNTAPKDAAGAGDS 445 Query: 361 FLTCTSMAMTVGVDIWQSMYLGSIAAACQVSRVGNIPLSASDLMQEL 407 F C ++A+ +G DIW S YL SIAAACQV R+GNIP++A D+++EL Sbjct: 446 FFVCAALALAIGTDIWCSAYLASIAAACQVGRIGNIPVTARDIIREL 492 >ref|YP_004107785.1| cytidyltransferase-like domain-containing protein [Rhodopseudomonas palustris DX-1] gb|ADU43052.1| cytidyltransferase-related domain protein [Rhodopseudomonas palustris DX-1] Length = 494 Score = 509 bits (1311), Expect = e-142, Method: Composition-based stats. Identities = 244/407 (59%), Positives = 315/407 (77%) Query: 1 MTSAPEDIIRALKPSIVVKGDEHESKFNPEQAAVDEYGGKLMFSSGEMRFSSIDLLKRDI 60 + A ED I AL+PS+VVKG EHE NPE+A +D YGG+L+FSSGE+ FSS+DL+KR+ Sbjct: 86 LHDAAEDFIAALQPSVVVKGKEHEGADNPEKAVLDGYGGRLVFSSGEVAFSSLDLIKREF 145 Query: 61 LEPNLSSIVLPNDYPERHAFTMHDLRSTVEKFKGLRVAVLGDLIVDEYVSCEALGMSQED 120 E N SSIV P DYP RH F +L+S + F LRV V+GDLIVDEY++C+ LG+SQED Sbjct: 146 REFNPSSIVKPLDYPRRHRFEPLELKSVLAGFPKLRVLVIGDLIVDEYIACDPLGLSQED 205 Query: 121 PTLVVTPIMQERFIGGAGIVASHACKLGAQVNYFSVAGKDAAADFAREKLSEYHVTATLF 180 PT+VVTP+++E F+GGAGIVA HA +GAQV +V G DA ADFARE+L+ Y+V AT+ Sbjct: 206 PTIVVTPVLRELFVGGAGIVAGHAAGMGAQVGLLTVGGGDAMADFARERLASYNVDATIL 265 Query: 181 EDDSRPTTLKQRFRAAGKTLLRVSHLRQHDIEPRLAQRYAEAVIATLDNCDLVIFSDFNY 240 D+SRPTT KQRFRA KTLLRVSHL+QHD++ L R E + L DLV+FSDFNY Sbjct: 266 TDESRPTTTKQRFRAGNKTLLRVSHLKQHDVDADLQTRMLETIEHRLPTTDLVVFSDFNY 325 Query: 241 GCLPQAVVDQLVEACVERGIPFVADSQSSSQMGDVSRFRGAMLLTPTEREARLAVRDYSS 300 GCLP +V+ + +AC RG+P VADSQSSSQ+GD+SRF +L+ PTEREARLA+RD+ S Sbjct: 326 GCLPTRLVEAIGQACRARGVPMVADSQSSSQVGDISRFTEMLLIKPTEREARLAMRDFDS 385 Query: 301 GLVVLAEKLRQRSQSENIILTLGAEGILAHAQSEGELDWLTDRLPAFNSSPKDTAGAGDS 360 GLVVL E LR++++++N+ILTL AEG+L HA++ +TDRLPAFN++PKD AGAGDS Sbjct: 386 GLVVLVEGLREKARAKNVILTLAAEGLLVHAETGSAGTVVTDRLPAFNTAPKDAAGAGDS 445 Query: 361 FLTCTSMAMTVGVDIWQSMYLGSIAAACQVSRVGNIPLSASDLMQEL 407 F C ++A+ +G DIW+S YL SIAAACQV R+GNIP++A D+++EL Sbjct: 446 FFVCAALALAIGTDIWRSAYLASIAAACQVGRIGNIPVTARDIIREL 492 >ref|YP_487410.1| cytidyltransferase-related [Rhodopseudomonas palustris HaA2] gb|ABD08499.1| Cytidyltransferase-related [Rhodopseudomonas palustris HaA2] Length = 494 Score = 495 bits (1274), Expect = e-138, Method: Composition-based stats. Identities = 243/403 (60%), Positives = 310/403 (76%) Query: 5 PEDIIRALKPSIVVKGDEHESKFNPEQAAVDEYGGKLMFSSGEMRFSSIDLLKRDILEPN 64 PED++ ALKP++VVKG EHE NPE+ +D YGG+L+FSSGE+ FSS+DL++R+ E N Sbjct: 90 PEDVVAALKPAVVVKGKEHEGADNPEKPVLDSYGGRLLFSSGEVAFSSLDLIRREFREFN 149 Query: 65 LSSIVLPNDYPERHAFTMHDLRSTVEKFKGLRVAVLGDLIVDEYVSCEALGMSQEDPTLV 124 SSI P DYP RH F + DL++ + KF L+V V+GDLIVDEY++C+ LGMSQEDPT+V Sbjct: 150 PSSIFKPLDYPRRHRFDVADLKTVLAKFPTLKVLVIGDLIVDEYIACDPLGMSQEDPTIV 209 Query: 125 VTPIMQERFIGGAGIVASHACKLGAQVNYFSVAGKDAAADFAREKLSEYHVTATLFEDDS 184 VTP+++E F+GGAGIVA HA +G +V+ +V GKDA AD ARE+L+ Y V AT+ D+S Sbjct: 210 VTPVLRELFVGGAGIVAGHAAGMGCKVSLLTVGGKDAMADLARERLASYDVDATILTDES 269 Query: 185 RPTTLKQRFRAAGKTLLRVSHLRQHDIEPRLAQRYAEAVIATLDNCDLVIFSDFNYGCLP 244 RPTT KQRFRA KTLLRVSHL+QHDI+ L V L N DLV+FSDFNYGCLP Sbjct: 270 RPTTCKQRFRAGNKTLLRVSHLKQHDIDVDLQDSMLATVRDKLPNIDLVVFSDFNYGCLP 329 Query: 245 QAVVDQLVEACVERGIPFVADSQSSSQMGDVSRFRGAMLLTPTEREARLAVRDYSSGLVV 304 +V+ + C ER IP VADSQSSSQ+GD+SRFR +L+ PTEREARLA+RD+ SGLVV Sbjct: 330 TKLVEAISALCRERSIPMVADSQSSSQVGDISRFRNMLLIKPTEREARLALRDFDSGLVV 389 Query: 305 LAEKLRQRSQSENIILTLGAEGILAHAQSEGELDWLTDRLPAFNSSPKDTAGAGDSFLTC 364 L E LRQ+++++N+ILTL AEG+L HA LTDRLPAFN++PKD AGAGDSF C Sbjct: 390 LVEALRQKAKAKNVILTLAAEGLLVHAAGGRGGSVLTDRLPAFNTAPKDAAGAGDSFFVC 449 Query: 365 TSMAMTVGVDIWQSMYLGSIAAACQVSRVGNIPLSASDLMQEL 407 +A+ VG DIW++ YL SIAAACQV R+GNIP++A+D+++EL Sbjct: 450 AGLALAVGTDIWRAAYLASIAAACQVGRIGNIPVTAADIIKEL 492 >ref|ZP_07374499.1| ADP-heptose synthase [Ahrensia sp. R2A130] gb|EFL89549.1| ADP-heptose synthase [Ahrensia sp. R2A130] Length = 508 Score = 444 bits (1142), Expect = e-122, Method: Composition-based stats. Identities = 221/401 (55%), Positives = 293/401 (73%), Gaps = 2/401 (0%) Query: 7 DIIRALKPSIVVKGDEHESKFNPEQAAVDEYGGKLMFSSGEMRFSSIDLLKRDILEPNLS 66 D I LKP V+KG EH N EQA VD YGGKL+F+SGE+RFSS+ LLKR+ S Sbjct: 101 DFISVLKPDFVIKGREHLDDENDEQAIVDGYGGKLLFASGEVRFSSVQLLKREYAGRMHS 160 Query: 67 SIVLPNDYPERHAFTMHDLRSTVEKFKGLRVAVLGDLIVDEYVSCEALGMSQEDPTLVVT 126 +I LP +YPERH L +++F+ LR+ V+GD+I+DEY+ C+ LGMSQEDPT+VVT Sbjct: 161 AIELPKNYPERHDMDPVTLGKRLKEFRDLRMLVVGDVIMDEYIDCDPLGMSQEDPTIVVT 220 Query: 127 PIMQERFIGGAGIVASHACKLGAQVNYFSVAGKDAAADFAREKLSEYHVTATLFEDDSRP 186 PI F+GGAGIVA HA KLGA V + +V G D + A+ KL E+ V A D +RP Sbjct: 221 PIDSHLFLGGAGIVAGHARKLGADVEFITVTGGDETSAKAKAKLDEFDVRAMFITDTTRP 280 Query: 187 TTLKQRFRAAGKTLLRVSHLRQHDIEPRLAQRYAEAVIATLDNCDLVIFSDFNYGCLPQA 246 TTLKQRFRA GKTLLRVSHLRQH ++ +LAQR +A+I+ LD+ D+++FSDFNYGCLPQ+ Sbjct: 281 TTLKQRFRAHGKTLLRVSHLRQHAVDVKLAQRMVDAIISRLDDVDVLLFSDFNYGCLPQS 340 Query: 247 VVDQLVEACVERGIPFVADSQSSSQMGDVSRFRGAMLLTPTEREARLAVRDYSSGLVVLA 306 V+D ++ +RG+ ADSQ+SSQM D+SRF+ L+TPTEREARLA+ D SGL L Sbjct: 341 VIDPVIAEARKRGVFVGADSQASSQMSDISRFQHMDLITPTEREARLALGDSESGLASLV 400 Query: 307 EKLRQRSQSENIILTLGAEGILAHAQSEGELDWLTDRLPAFNSSPKDTAGAGDSFLTCTS 366 +KL+ ++ + N+I+TLGAEG+L +++S G D TDRLPAF + P+D +GAGD T T+ Sbjct: 401 QKLQDKADARNVIITLGAEGLLIYSKSHG--DKGTDRLPAFTTDPRDVSGAGDCLFTITA 458 Query: 367 MAMTVGVDIWQSMYLGSIAAACQVSRVGNIPLSASDLMQEL 407 MA+ VG+ IW++ YLGS+AAACQ SR+GN PL+ D+ +E+ Sbjct: 459 MALRVGMSIWEAAYLGSLAAACQASRIGNTPLTWKDMQREI 499