BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.5639.p (477 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001202499.1| hypothetical protein BRADO0291 [Bradyrhizobi... 526 e-147 ref|YP_001236484.1| hypothetical protein BBta_0285 [Bradyrhizobi... 521 e-146 ref|YP_001118402.1| hypothetical protein Bcep1808_0555 [Burkhold... 278 2e-72 ref|ZP_02381852.1| hypothetical protein BuboB_29288 [Burkholderi... 267 3e-69 ref|ZP_02188785.1| hypothetical protein BAL199_27686 [alpha prot... 125 1e-26 >ref|YP_001202499.1| hypothetical protein BRADO0291 [Bradyrhizobium sp. ORS 278] emb|CAL74249.1| hypothetical protein BRADO0291 [Bradyrhizobium sp. ORS 278] Length = 469 Score = 526 bits (1355), Expect = e-147, Method: Composition-based stats. Identities = 269/446 (60%), Positives = 336/446 (75%), Gaps = 7/446 (1%) Query: 30 QFIRENRRSDAIACFARLAE-EKSDLNARFIHAQLIDDGSHKQLAAARDAAVSILEDFPA 88 ++I + A F +L E + D+NARFI+AQLIDDGSHK+ A ARD ++IL++ P Sbjct: 26 KYIEDKDFVSAQLAFQKLLELDPKDINARFIYAQLIDDGSHKKRAEARDMMLAILDENPE 85 Query: 89 LFDNGTEANCALVRFAAQRCSYVGPQEKAADLYRRLVAMSNSAADYYHLSESLSHINNVA 148 +F+ TE N L+R AA RCS+VGP ++ +L+R+L SN AADY+ LSE L+ Sbjct: 86 IFEQATEGNLHLIRSAAVRCSHVGPFTRSMELFRKLAKASNEAADYFSLSEILTQ----N 141 Query: 149 NNLADSIAALEKAIALDPAVYDTDTNRETIKLGKA-ALAQQAEAASPKRKKIGRYPLTED 207 N +++AALEKAI L+PA YD NRET+ L ++ A +A A R K+GRYP T+D Sbjct: 142 NEFEEAVAALEKAIKLNPA-YDIPVNRETLDLARSNAKKGKARDAKAGRAKVGRYPETKD 200 Query: 208 FVGDLPALIKKHIAFDLRNEEKFISRATRFFTMGSCFARNISAALNKSGYNSTHMEISEY 267 F+GDL LI HIA +L + KF+ ++TRFFTMGSCFARN+S +LN SGYNS HMEISEY Sbjct: 201 FLGDLQTLITSHIAVNLASAPKFLDKSTRFFTMGSCFARNLSKSLNDSGYNSHHMEISEY 260 Query: 268 INTTFANRAFVDWLSTGKTDVAVSERIQELLPPGWSADSTLEKIRNSDVFILTLGVAPAF 327 INTTFANR FVDWL K D + ERI ELLP G S ++TL I+ +DVFILTLGVA AF Sbjct: 261 INTTFANRVFVDWLRGAKIDPEIRERIVELLPQGSSQENTLAVIKQADVFILTLGVAAAF 320 Query: 328 FDKTTGAFVLPRPTALNSRVLGEKYEYRTTTVQENVDNVLYLINFVRKLAPHAKVVITVS 387 FD+ TGAFVLPRPTALNSR L EKY++RT +VQENVDNV YLI+FVR + P KV++TVS Sbjct: 321 FDRETGAFVLPRPTALNSRALAEKYKFRTASVQENVDNVRYLIDFVRSIRPGIKVIVTVS 380 Query: 388 PVPLIASFEFESCVVADCLSKSTMRLVAHQVVHQSGLSNVLYWPSFEVFRWGGSNASNFY 447 PVPL+ SFE+ES V ADCLSKSTMRLVAH++V+ SGL ++ YWPSFEVFRWGGSNAS+F+ Sbjct: 381 PVPLLTSFEYESVVQADCLSKSTMRLVAHEIVNNSGLEDIWYWPSFEVFRWGGSNASSFF 440 Query: 448 AADDGAAWHVSEEKVNGTIGAFIDMF 473 AADDGAAWHVSE+KV+ T+ AF+ F Sbjct: 441 AADDGAAWHVSEDKVSATVRAFVQTF 466 >ref|YP_001236484.1| hypothetical protein BBta_0285 [Bradyrhizobium sp. BTAi1] gb|ABQ32578.1| hypothetical protein BBta_0285 [Bradyrhizobium sp. BTAi1] Length = 467 Score = 521 bits (1343), Expect = e-146, Method: Composition-based stats. Identities = 264/445 (59%), Positives = 333/445 (74%), Gaps = 6/445 (1%) Query: 30 QFIRENRRSDAIACFARLAE-EKSDLNARFIHAQLIDDGSHKQLAAARDAAVSILEDFPA 88 ++I + A F +L E + D+NARFI+AQLIDDGSHK+ A ARD ++IL++ P Sbjct: 25 KYIEDKDFVSAQLAFQKLLELDPKDINARFIYAQLIDDGSHKKRAEARDMMLAILDEHPE 84 Query: 89 LFDNGTEANCALVRFAAQRCSYVGPQEKAADLYRRLVAMSNSAADYYHLSESLSHINNVA 148 +F++ +E N L+R AA RCS+VGP ++ +L+R+L SN AADY+ LSE L+ Sbjct: 85 IFNDPSEGNLHLIRSAAVRCSHVGPFTRSMELFRKLARASNQAADYFSLSEILTQ----G 140 Query: 149 NNLADSIAALEKAIALDPAVYDTDTNRETIKLGKAALAQQAEAASPKRKKIGRYPLTEDF 208 N +++AALEKAI L+PA YD NRET++L ++ + R K+GRYP T+DF Sbjct: 141 NEFEEAVAALEKAIQLNPA-YDNPINRETLELARSNAKKGKAKDVKARAKVGRYPETKDF 199 Query: 209 VGDLPALIKKHIAFDLRNEEKFISRATRFFTMGSCFARNISAALNKSGYNSTHMEISEYI 268 +GDL LI HIA +L KF+ ++TRFFTMGSCFARN+S +LN SGY+S HMEISEYI Sbjct: 200 LGDLQTLITSHIAVNLAAAPKFLDKSTRFFTMGSCFARNLSKSLNDSGYSSHHMEISEYI 259 Query: 269 NTTFANRAFVDWLSTGKTDVAVSERIQELLPPGWSADSTLEKIRNSDVFILTLGVAPAFF 328 NTTFANR FVDWL K + + ERI ELLPPG S STL I+ +DVFILTLGVA AFF Sbjct: 260 NTTFANRVFVDWLRDAKINPEIEERIVELLPPGSSKWSTLTAIKQADVFILTLGVAAAFF 319 Query: 329 DKTTGAFVLPRPTALNSRVLGEKYEYRTTTVQENVDNVLYLINFVRKLAPHAKVVITVSP 388 D+ TGAFVLPRP+ALNSR L EKY++RT +VQENVDNVLYLI+F+R + P KV++TVSP Sbjct: 320 DRETGAFVLPRPSALNSRALAEKYKFRTASVQENVDNVLYLIDFIRSIKPGIKVIVTVSP 379 Query: 389 VPLIASFEFESCVVADCLSKSTMRLVAHQVVHQSGLSNVLYWPSFEVFRWGGSNASNFYA 448 VPL+ SFE+ES V ADCLSKSTMRLVAH+VV+ S L ++ YWPSFEVFRWGGSNAS+F+A Sbjct: 380 VPLLTSFEYESVVQADCLSKSTMRLVAHEVVNNSNLPDIWYWPSFEVFRWGGSNASSFFA 439 Query: 449 ADDGAAWHVSEEKVNGTIGAFIDMF 473 ADDGAAWHVSE+KV T+ AF+ F Sbjct: 440 ADDGAAWHVSEDKVAATVRAFVQTF 464 >ref|YP_001118402.1| hypothetical protein Bcep1808_0555 [Burkholderia vietnamiensis G4] gb|ABO53567.1| hypothetical protein Bcep1808_0555 [Burkholderia vietnamiensis G4] Length = 481 Score = 278 bits (710), Expect = 2e-72, Method: Composition-based stats. Identities = 167/418 (39%), Positives = 243/418 (58%), Gaps = 35/418 (8%) Query: 67 GSHKQLAAARDAAVSILEDFPALFDNGTEANC-----ALVRFAAQRCSYVGPQEKAADLY 121 G HK A RD A + L L +N +A + A SYVGP E A Y Sbjct: 87 GLHKSWAIRRDHAKNALR----LVENTPQAAAWPQLKVCLEILATAASYVGPPEDAEFAY 142 Query: 122 RRLVAMSNSAADYYHLSESLSHINNVANNLADSIAALEKAIALDPAVYDTDTNRETIKLG 181 R L+ + + AD+Y LS + ++L +++A ++ A L+PA+ N+ ++L Sbjct: 143 RWLIKIDPANADHY---AKLSQLR-ADDDLEEAVALIDHARTLNPAI----VNKTDVELS 194 Query: 182 KAALAQQAEAASPKRKKIGR--YPLTEDFVGDLPALIKKHIAFDLRNEEKFISRATRFFT 239 + L+ +RK I R YP T + GDL A+I+ + D +++FI + TRFFT Sbjct: 195 RKVLSD-----GTRRKSIARAKYPSTREMRGDLSAVIRTSL-LDGLPKQRFIDKETRFFT 248 Query: 240 MGSCFARNISAALNKSGYNSTHMEISEYINTTFANRAFVDWLSTGKTDVAVSERIQELLP 299 +GSCFAR I+ L + GY + E+ E+IN++FANR VDW + G+ ER+ EL Sbjct: 249 LGSCFAREIAVRLIERGYQADFFEVVEHINSSFANRKMVDW-ALGQCTGQSKERLDELFA 307 Query: 300 PGWSADSTLEKIR----NSDVFILTLGVAPAFFDKTTGAFVLPRPTALNSRVLGEKYEYR 355 S + T E +R + VF+ TLGVAPAFFD+ +G FV+P +AL SR E Y++R Sbjct: 308 ---SLNITPENLRVRLAAAKVFVYTLGVAPAFFDRQSGEFVMPSSSALGSRAFAEMYDFR 364 Query: 356 TTTVQENVDNVLYLINFVRKLAPHAKVVITVSPVPLIASFEFESCVVADCLSKSTMRLVA 415 TTTV +N+DN+ Y++ ++ L P KVV+TVSPVPL +FEF+S + ADC+SKST+R+VA Sbjct: 365 TTTVGQNLDNLDYIVANIKALNPDVKVVLTVSPVPLKTTFEFKSAIQADCISKSTLRVVA 424 Query: 416 HQVVHQSGLSNVLYWPSFEVFRWGGSNASNFYAADDGAAWHVSEEKVNGTIGAFIDMF 473 H+ V + +V+YWPSFE+ RW G + FY DD AA HV + V +FI+ F Sbjct: 425 HEFVTSN--PDVIYWPSFEIVRWLGGHVGPFYGNDDDAALHVGDHVVKAITDSFIEHF 480 >ref|ZP_02381852.1| hypothetical protein BuboB_29288 [Burkholderia ubonensis Bu] Length = 461 Score = 267 bits (682), Expect = 3e-69, Method: Composition-based stats. Identities = 165/413 (39%), Positives = 242/413 (58%), Gaps = 25/413 (6%) Query: 67 GSHKQLAAARD---AAVSILEDFPALFDNGTEANCALVRFAAQRCSYVGPQEKAADLYRR 123 G HK A RD A+ ++E+ P C + A SYVGPQ+ A YR Sbjct: 67 GFHKSWAVRRDHARQALGLVENSPNAAQWPQLKLC--LEMLATAASYVGPQDDAEFAYRW 124 Query: 124 LVAMSNSAADYYHLSESLSHINNVANNLADSIAALEKAIALDPAVYDTDTNRETIKLGKA 183 L+ + A +Y +LS I + + A L+KA +L P + NR + Sbjct: 125 LIRIDPDNAGHY---ANLSQIRADDDLDEAA-ALLDKAQSLSPNI----ANRNDL----- 171 Query: 184 ALAQQAEAASPKRKKIGR--YPLTEDFVGDLPALIKKHIAFDLRNEEKFISRATRFFTMG 241 AL+++ +A +R I R YP T++ GDL ++I+ + +L +++F+S TRFFT+G Sbjct: 172 ALSRKVLSAGERRAPIARAKYPTTKEMRGDLASVIRSTLLKEL-PKQRFVSADTRFFTLG 230 Query: 242 SCFARNISAALNKSGYNSTHMEISEYINTTFANRAFVDWLSTGKTDVAVSERIQELLPP- 300 SCFAR I+ L + GY + E+ E+IN++FANR+ VDW + GK ER+ EL Sbjct: 231 SCFAREIATRLIERGYRADFFEVVEHINSSFANRSMVDW-AQGKCRGQSRERLDELFASL 289 Query: 301 GWSADSTLEKIRNSDVFILTLGVAPAFFDKTTGAFVLPRPTALNSRVLGEKYEYRTTTVQ 360 + D + ++VFI TLGVAPAFFD+ +G FV+P + SR E Y++RTTTVQ Sbjct: 290 NITPDGLRARWAAANVFIYTLGVAPAFFDRQSGEFVMPSSSTFASRAFAEMYDFRTTTVQ 349 Query: 361 ENVDNVLYLINFVRKLAPHAKVVITVSPVPLIASFEFESCVVADCLSKSTMRLVAHQVVH 420 EN++N+ Y+ +++R L P+ K+VITVSPVPL +FEF+S + ADC+SKST+R+VAH+ V Sbjct: 350 ENLENLEYIASYIRTLNPNVKIVITVSPVPLKTTFEFKSAMQADCISKSTLRVVAHEFVT 409 Query: 421 QSGLSNVLYWPSFEVFRWGGSNASNFYAADDGAAWHVSEEKVNGTIGAFIDMF 473 + +V+YWPSFEV RW G + FY DD AA HV ++ V FI+ + Sbjct: 410 KH--PDVVYWPSFEVVRWLGGHVGPFYGNDDDAALHVGDDVVKAITDLFIEHY 460 >ref|ZP_02188785.1| hypothetical protein BAL199_27686 [alpha proteobacterium BAL199] gb|EDP64613.1| hypothetical protein BAL199_27686 [alpha proteobacterium BAL199] Length = 441 Score = 125 bits (315), Expect = 1e-26, Method: Composition-based stats. Identities = 89/286 (31%), Positives = 144/286 (50%), Gaps = 17/286 (5%) Query: 202 YPLTEDFVGDLPALIKKHIAFDLRNEEKFISRATRFFTMGSCFARNISAALNKSGYNSTH 261 +P + DL ++++ + E I MGSCFA++I L + G S H Sbjct: 162 FPRLREEFDDLDTVLQRDVFHGYLPERPLIPNDKPTVAMGSCFAQHIRQFLIRHGRLSEH 221 Query: 262 MEISEYINTTFANRAFVDWLSTGKTDVAVS-ERIQELLPPGWSADSTL----EKIRNSDV 316 + I E +N TFA R FVDW+ G+ ++ S E+ + W D ++++ Sbjct: 222 VPIPEGLNNTFAVRQFVDWIE-GRDELVFSYEKSTDGRMQRWDVDKDRGLFRAAMKSAGA 280 Query: 317 FILTLGVAPAFFDKTTGAFV---LPRPTALNSRVLGEKYEYRTTTVQENVDNVLYLINFV 373 FI+T+GVA + D+ TG +P +R +E+ +TV+EN++N+ + + + Sbjct: 281 FIVTIGVAEVWRDRLTGGVYWRGVPEDQYDPAR-----HEHVLSTVEENIENLKAITDGL 335 Query: 374 RKLAPHAKVVITVSPVPLIASFEF-ESCVVADCLSKSTMRLVAHQVVHQSGLSNVLYWPS 432 R++A +V+T+SPVPL+A+ + S AD +SKS +RL VV G S+ YWPS Sbjct: 336 RRIAGEVPIVLTLSPVPLLATMQKGTSIFAADTVSKSILRLAIEAVVRAPG-SHARYWPS 394 Query: 433 FEVFRWGGSNASNFYAADDGAAWHVSEEKVNGTIGAFID-MFDAGR 477 FE FR G++ +G H + E + I F+D FD R Sbjct: 395 FEAFRSLGAHLDQSMYDGEGNPRHPNTEMIGRIIKLFVDHYFDPAR 440