BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.5635.p (343 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001207083.1| aminoglycoside phosphotransferase family pro... 242 7e-62 ref|YP_001241504.1| hypothetical protein BBta_5640 [Bradyrhizobi... 235 7e-60 ref|ZP_07374490.1| aminoglycoside phosphotransferase family prot... 187 2e-45 ref|ZP_01385427.1| conserved hypothetical protein [Chlorobium fe... 178 9e-43 ref|ZP_07109978.1| conserved hypothetical protein [Oscillatoria ... 176 6e-42 >ref|YP_001207083.1| aminoglycoside phosphotransferase family protein [Bradyrhizobium sp. ORS 278] emb|CAL78866.1| Conserved hypothetical protein; putative aminoglycoside phosphotransferase family protein [Bradyrhizobium sp. ORS 278] Length = 347 Score = 242 bits (617), Expect = 7e-62, Method: Composition-based stats. Identities = 156/332 (46%), Positives = 194/332 (58%), Gaps = 12/332 (3%) Query: 11 TMVNTGLQATITALLTQSGLDAGDLRLTALDGGGNNRVYAVDTAGGRYLAKAYFSDAADT 70 T + L L Q+G A L LT L GG NN+VY +DTA G + K YF+DA DT Sbjct: 8 TEADAALLPLAQRLAAQAG-KASPLALTRLAGGRNNQVYRLDTAEGPLVLKRYFTDARDT 66 Query: 71 RDRLGAEYGFLRYAGKLGLRCVPRALACDLQQRVGLYEYVHGEKIAAARLTSAHVMAAAQ 130 RDRLGAE+ F+ +A G+R VP LACD ++ GLY +V G K+ A L AHV AA Sbjct: 67 RDRLGAEWSFISHAWSHGVRVVPEPLACDRAEQAGLYSFVEGRKLTALELAPAHVDAAID 126 Query: 131 FLHVLNAARHDGHDLPPASEACFDLTQHLTTVDRRIARLQALAPADALDAQAQALISE-M 189 F+ +NA L P SEACF L +HL TV+RR+ARL L A+A+ ++E + Sbjct: 127 FVLAVNAPPRPA--LAPGSEACFSLAEHLATVERRVARLATLDADVPHVAEARQFVAERL 184 Query: 190 AAVWQHHRARLL----AEGLPLLAE--ADR-CISPSDFGFHNVLLRPDGQLCFIDFEYAG 242 W +A +L AEGL L A AD+ C+SPSDFGFHN L+ G+L F+DFEYAG Sbjct: 185 QPAWAEVKATILQGAAAEGLVLNAAIPADQVCLSPSDFGFHNALIDDQGKLTFLDFEYAG 244 Query: 243 WDDPAKMIGDFFCQPAVPVPFGDFEDFAGQALAWSDHAAALRERASLLLPVMQAKWCCIM 302 DDPAK++ DFFCQP VPVP E F + AA R LL+ Q KW CI+ Sbjct: 245 RDDPAKLVSDFFCQPEVPVPLAVHEHFIDRLTEGLGLDAASVARCRLLIDAYQVKWTCII 304 Query: 303 LNEFLPEAARRRQFADASISVDQRKRTQLDKA 334 LN+FLP A RR FAD + QR QL KA Sbjct: 305 LNDFLPLGATRRAFADTG-AWAQRCAAQLAKA 335 >ref|YP_001241504.1| hypothetical protein BBta_5640 [Bradyrhizobium sp. BTAi1] gb|ABQ37598.1| hypothetical protein BBta_5640 [Bradyrhizobium sp. BTAi1] Length = 347 Score = 235 bits (600), Expect = 7e-60, Method: Composition-based stats. Identities = 146/306 (47%), Positives = 182/306 (59%), Gaps = 11/306 (3%) Query: 37 LTALDGGGNNRVYAVDTAGGRYLAKAYFSDAADTRDRLGAEYGFLRYAGKLGLRCVPRAL 96 LT L GG NN+V+ VDT G + K YF+DA D+RDRLGAE+ F+ +A G+R VP + Sbjct: 33 LTRLAGGRNNQVFRVDTEAGPLVLKRYFTDARDSRDRLGAEWSFISHAWSRGVRVVPEPM 92 Query: 97 ACDLQQRVGLYEYVHGEKIAAARLTSAHVMAAAQFLHVLNAARHDGHDLPPASEACFDLT 156 ACD + GLY +V G K+ AA L AHV AA F+ +NA L P SEACF L Sbjct: 93 ACDRAVQAGLYSFVEGRKLTAAELAPAHVDAAIDFVLAVNAPPRP--TLAPGSEACFSLA 150 Query: 157 QHLTTVDRRIARLQAL-APADALDAQAQALISEMAAVWQHHRARLL----AEGLPLLAE- 210 +H+ TV+RR+ARL L A + Q + + + W +A +L AEGL L A Sbjct: 151 EHIATVERRVARLATLDADVPHVSEARQFVATRLQPAWAEVKATILRGAAAEGLALDAAI 210 Query: 211 -ADR-CISPSDFGFHNVLLRPDGQLCFIDFEYAGWDDPAKMIGDFFCQPAVPVPFGDFED 268 AD+ C+SPSDFGFHN L+ G+L F+DFEYAG DDPAK++ DFFCQP VPVP E Sbjct: 211 PADQVCLSPSDFGFHNALIDDQGKLTFLDFEYAGRDDPAKLVSDFFCQPEVPVPLAAHEH 270 Query: 269 FAGQALAWSDHAAALRERASLLLPVMQAKWCCIMLNEFLPEAARRRQFADASISVDQRKR 328 F + AA R LLL Q KW CI+LN+FLP A RR FAD + QR Sbjct: 271 FIDRLADGLGLDAASVARCRLLLDAYQVKWTCIILNDFLPLGAVRRAFADTG-AWAQRCA 329 Query: 329 TQLDKA 334 QL KA Sbjct: 330 VQLAKA 335 >ref|ZP_07374490.1| aminoglycoside phosphotransferase family protein [Ahrensia sp. R2A130] gb|EFL89540.1| aminoglycoside phosphotransferase family protein [Ahrensia sp. R2A130] Length = 336 Score = 187 bits (475), Expect = 2e-45, Method: Composition-based stats. Identities = 130/324 (40%), Positives = 173/324 (53%), Gaps = 9/324 (2%) Query: 23 ALLTQSGLDAGDLRLTALDGGGNNRVYAVDTAGG-RYLAKAYFSDAADTRDRLGAEYGFL 81 +L +GL A + L GG NNRV+ V+ GG + + K Y D AD RDRL AE+ +L Sbjct: 16 SLAASAGLSA-PVSQVRLAGGRNNRVHLVNHQGGTKTILKRYHHDPADKRDRLAAEWDYL 74 Query: 82 RYAGKLGLRCVPRALACDLQQRVGLYEYVHGEKIAAARLTSAHVMAAAQFLHVLNAARHD 141 L L LA + LY ++ G K A + A V AAQF+ N Sbjct: 75 TTLQPLNLGKTLDPLADNKDAHAALYTFIEGRKPARDEIDEALVDQAAQFIVDTNRTPVL 134 Query: 142 GHDLPPASEACFDLTQHLTTVDRRIARLQALAPADALDAQAQALIS-EMAAVWQHHRARL 200 D ASEACF L +H+ +VDRR+ARL A+ P L QA+A+ + E+ W R R Sbjct: 135 A-DTRSASEACFTLNEHIASVDRRVARLAAIDPEAPLADQAKAIANDEIVPAWTRIR-RA 192 Query: 201 LAEGLPLLAEA--DRCISPSDFGFHNVLLRPDGQLCFIDFEYAGWDDPAKMIGDFFCQPA 258 + EG + + +SPSDFGFHN L+ G FIDFEYAG DD +K+I DFFCQP Sbjct: 193 ITEGSKAGDKTITSQILSPSDFGFHNSLIDETGCATFIDFEYAGRDDASKLICDFFCQPE 252 Query: 259 VPVPFGDFEDFAGQALAWSDHAAALRERASLLLPVMQAKWCCIMLNEFLPEAARRRQFAD 318 +PV + F L + A A R R +LLP + KW CIM+NEFL ARRR+FA+ Sbjct: 253 IPVSLDHYPRFRDIILNAINAADADRARCDVLLPAYRIKWLCIMMNEFLTTGARRREFAE 312 Query: 319 --ASISVDQRKRTQLDKARQFFQS 340 A + R+ ++KA Q+ Sbjct: 313 DTARETRAARQLATINKALSALQN 336 >ref|ZP_01385427.1| conserved hypothetical protein [Chlorobium ferrooxidans DSM 13031] gb|EAT59794.1| conserved hypothetical protein [Chlorobium ferrooxidans DSM 13031] Length = 348 Score = 178 bits (452), Expect = 9e-43, Method: Composition-based stats. Identities = 117/351 (33%), Positives = 183/351 (52%), Gaps = 16/351 (4%) Query: 1 MAGDPGLLRGTMVNTGLQATITALLTQSGLDAGDLRLTALDGGGNNRVYAVDTAGGRYLA 60 MAG R +++ ++ ++ + G++A L + G N+ V + +++ Sbjct: 1 MAGAAAPARTDLMSFAME-SLELFCARFGIEA-PFTLNPVRSGRNSEVLLIGKGRKKWIV 58 Query: 61 KAYFSDAADTRDRLGAEYGFLRYAGKLGLRCVPRALACDLQQRVGLYEYVHGEKIAAARL 120 K YF D RDRL AE+GFL + G+ V R L + LY ++ G++ + Sbjct: 59 KHYFQQGRDKRDRLAAEFGFLTFLNNAGVAGVSRPLGINQSLHAALYSFLPGKR--PEIV 116 Query: 121 TSAHVMAAAQFLHVLNAARHDG--HDLPPASEACFDLTQHLTTVDRRIARL-QALAPADA 177 T+ H+ AA F+ +N+ R+ L PA++ACF H+ + RI RL AL+P Sbjct: 117 TARHITQAADFIGNINSFRNSAAARSLLPAADACFSQQGHIRLAETRIDRLLAALSPESG 176 Query: 178 LDAQAQALISE-MAAVWQHHRARLLAEGLPL-----LAEADRCISPSDFGFHNVLLRPDG 231 ++A+A + E + +++ +AR+ A+ P L+ +R +SPSDFGFHN L +G Sbjct: 177 VEAEACRFVKERLRPLYERLKARVSAQRSPSQLAEPLSPEERILSPSDFGFHNTL-ELNG 235 Query: 232 QLCFIDFEYAGWDDPAKMIGDFFCQPAVPVPFGDFEDFAGQALAWSDHAAALRERASLLL 291 L F+DFEYAGWDDPAK+I DF CQP +PV F + + +L R LLL Sbjct: 236 ALSFLDFEYAGWDDPAKLICDFICQPELPVSAIQARQFTEELGISLPLSGSLSARVELLL 295 Query: 292 PVMQAKWCCIMLNEFLPEAARRRQFADASISVDQRKRTQLDKARQFFQSRL 342 P + KWC I+LNEF EA RR A + + QL K+++++ L Sbjct: 296 PFHRLKWCGILLNEFREEARNRR--LHAGVESEGMLDLQLVKSKRYYSEHL 344 >ref|ZP_07109978.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506] emb|CBN55128.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506] Length = 357 Score = 176 bits (445), Expect = 6e-42, Method: Composition-based stats. Identities = 108/315 (34%), Positives = 161/315 (51%), Gaps = 12/315 (3%) Query: 40 LDGGGNNRVYAVDTAG-GRYLAKAYFSDAADTRDRLGAEYGFLRYAGKLGLRCVPRALAC 98 + GG N++VY + A +Y AK YF +D R+RL E+ L++ + G+ +P+ L Sbjct: 33 IGGGRNSKVYKLTCANDSQYAAKLYFRHNSDKRNRLVTEFSSLQFLWENGVSQIPQPLVA 92 Query: 99 DLQQRVGLYEYVHGEKIAAARLTSAHVMAAAQFLHVLN--AARHDGHDLPPASEACFDLT 156 D LYEY+ G I TS + A FL L R + H LP ASEA F + Sbjct: 93 DKDFGCALYEYIEGSNILPQEATSNEISKAVDFLVKLAELKVRKNSHFLPLASEAFFSVQ 152 Query: 157 QHLTTVDRRIARLQAL--------APADALDAQAQALISEMAAVWQHHRARLLAEGLPLL 208 + +++R++RL AL A A+ L + Q ++ Q + + + Sbjct: 153 AIVQNIEQRLSRLSALPNSEAPYKALAEFLTGEFQPAFHQIVNWCQTNLNQSEMSYTAEI 212 Query: 209 AEADRCISPSDFGFHNVLLRPDGQLCFIDFEYAGWDDPAKMIGDFFCQPAVPVPFGDFED 268 E ++ +SPSDFGFHN L R +G++ F+DFEY GWDDPAK I DF P + + G + Sbjct: 213 EEREKTLSPSDFGFHNALRRANGEIIFVDFEYFGWDDPAKTISDFLLHPGMDLADGVRQQ 272 Query: 269 FAGQALAWSDHAAALRERASLLLPVMQAKWCCIMLNEFLPEAARRRQFADAS-ISVDQRK 327 F G+ L L +R ++ P+ KWC I+LNEF+P+ RR FA S + + Sbjct: 273 FFGEMLRGFRDYRHLAKRVEIVYPLFGLKWCLILLNEFVPQDLLRRGFAQGSDLDRSPLQ 332 Query: 328 RTQLDKARQFFQSRL 342 QL KA++ Q L Sbjct: 333 IEQLAKAKRMLQKIL 347