BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.5631.p (342 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_01385431.1| NAD-dependent epimerase/dehydratase [Chlorobi... 442 e-122 ref|NP_949262.1| putative dTDP-glucose 4,6-dehydratase [Rhodopse... 434 e-119 ref|YP_001993419.1| NAD-dependent epimerase/dehydratase [Rhodops... 434 e-119 ref|YP_004107779.1| NAD-dependent epimerase/dehydratase [Rhodops... 428 e-118 ref|YP_487415.1| dTDP-glucose 4,6-dehydratase [Rhodopseudomonas ... 426 e-117 >ref|ZP_01385431.1| NAD-dependent epimerase/dehydratase [Chlorobium ferrooxidans DSM 13031] gb|EAT59798.1| NAD-dependent epimerase/dehydratase [Chlorobium ferrooxidans DSM 13031] Length = 328 Score = 442 bits (1137), Expect = e-122, Method: Composition-based stats. Identities = 205/325 (63%), Positives = 253/325 (77%), Gaps = 1/325 (0%) Query: 18 LIIGSNSFSGASFVDYLLRNGNDVIGVSRSQEPHRAFLPYRWSGHQAAFTFYPYDLNKDL 77 LI+GSNSFSGA+F DY L+ G VIGVSRS EP AFLPY+W H + F+FY DLN+ L Sbjct: 5 LIVGSNSFSGATFADYALQQGAQVIGVSRSPEPVDAFLPYKWHDH-SNFSFYQLDLNRHL 63 Query: 78 AALTELIQREKPAIVVNFAAQSMVAESWKNPEHWFETNVMATIRLHEVLRQCDFLDKYVH 137 +T L++ +PA VVNFAAQSMV ESW+NP WF TN ++T++ H+ LR+ DFL +YVH Sbjct: 64 DEITRLLRERRPAYVVNFAAQSMVGESWQNPGDWFMTNTVSTVKFHDELRKVDFLRRYVH 123 Query: 138 ITTPEVYGSTDGFIKEDTPFNPSTPYAVSRAAADMSLKTYFDAYGFPVVFTRAANVYGPG 197 ++TPEVYGS GF+ ED PFNP+TPYAVSRAAADMSL+T+ YGFPVV TRAANVYGPG Sbjct: 124 VSTPEVYGSCSGFVSEDFPFNPTTPYAVSRAAADMSLRTFRAVYGFPVVTTRAANVYGPG 183 Query: 198 QQLYRIIPRTILSVLTGKKLQLHGGGLSRRSFIHMRDVSSATHAIATRGINGQTYHISTD 257 QQLYRIIPRTIL +L G+KLQLHGGG+S RSFI+M DV AT I G +GQTYHISTD Sbjct: 184 QQLYRIIPRTILCILLGRKLQLHGGGVSTRSFIYMDDVCDATWRIMQNGRDGQTYHISTD 243 Query: 258 EIVSVRELVERICAKLDVDFAANVEIVGERLGKDAAYMLDSSKLRQSLDWNVKVSLDEGL 317 E++S+RELVE +C KLDV F +VE VGERLGKD+AY LDSS++R+ L W LD+G+ Sbjct: 244 EVISIRELVELLCRKLDVKFEDHVECVGERLGKDSAYHLDSSRVRRELGWQDHTRLDQGI 303 Query: 318 DECVSWVRQNLDAMQTMEWNYVHKP 342 D C++WVR+N + ++ +Y HKP Sbjct: 304 DACIAWVRKNFEELKVQPLDYQHKP 328 >ref|NP_949262.1| putative dTDP-glucose 4,6-dehydratase [Rhodopseudomonas palustris CGA009] emb|CAE29366.1| putative dTDP-glucose 4,6-dehydratase [Rhodopseudomonas palustris CGA009] Length = 345 Score = 434 bits (1115), Expect = e-119, Method: Composition-based stats. Identities = 203/335 (60%), Positives = 256/335 (76%), Gaps = 4/335 (1%) Query: 8 RSGMNMSAKYLIIGSNSFSGASFVDYLLRNGNDVIGVSRSQEPHRAFLPYRWSGHQAAFT 67 R+G + KYL+IGSNSF+GAS V YLL G DV+G+SRS EPH AFLPYRW F Sbjct: 15 RAGFD---KYLVIGSNSFTGASMVSYLLDQGADVVGISRSDEPHPAFLPYRWK-KADRFR 70 Query: 68 FYPYDLNKDLAALTELIQREKPAIVVNFAAQSMVAESWKNPEHWFETNVMATIRLHEVLR 127 F DLN DL A+ +L+ E+ ++NFAAQSMV ESW NP+HWF TNV++T+RLHE LR Sbjct: 71 FQKLDLNHDLDAIMQLVTAERFPCIINFAAQSMVGESWANPDHWFMTNVVSTVRLHERLR 130 Query: 128 QCDFLDKYVHITTPEVYGSTDGFIKEDTPFNPSTPYAVSRAAADMSLKTYFDAYGFPVVF 187 CDFL++YVH+TTPEVYG+ G + ED F+PSTPYAVSRAA DMSL++YF AYGFPV+F Sbjct: 131 ICDFLERYVHVTTPEVYGNATGTLTEDAVFDPSTPYAVSRAAGDMSLRSYFRAYGFPVLF 190 Query: 188 TRAANVYGPGQQLYRIIPRTILSVLTGKKLQLHGGGLSRRSFIHMRDVSSATHAIATRGI 247 TRAANVYGPGQ+LYRI+PRTIL + G+KLQLHGGG S RSFIH DV+ AT IA G Sbjct: 191 TRAANVYGPGQRLYRIVPRTILFIKLGRKLQLHGGGTSERSFIHAADVADATRRIACNGK 250 Query: 248 NGQTYHISTDEIVSVRELVERICAKLDVDFAANVEIVGERLGKDAAYMLDSSKLRQSLDW 307 G +YHISTD IV++R LVE ICA + V F VEIVGERLGKDAAY LDSSKLR L W Sbjct: 251 LGDSYHISTDRIVTIRALVEMICAMMRVRFEDQVEIVGERLGKDAAYKLDSSKLRSELGW 310 Query: 308 NVKVSLDEGLDECVSWVRQNLDAMQTMEWNYVHKP 342 + +++L++G+++ ++W+ + + +++ ++Y HKP Sbjct: 311 SDQITLEQGIEQTIAWIDRWFEELKSQPFDYAHKP 345 >ref|YP_001993419.1| NAD-dependent epimerase/dehydratase [Rhodopseudomonas palustris TIE-1] gb|ACF02944.1| NAD-dependent epimerase/dehydratase [Rhodopseudomonas palustris TIE-1] Length = 345 Score = 434 bits (1115), Expect = e-119, Method: Composition-based stats. Identities = 203/335 (60%), Positives = 256/335 (76%), Gaps = 4/335 (1%) Query: 8 RSGMNMSAKYLIIGSNSFSGASFVDYLLRNGNDVIGVSRSQEPHRAFLPYRWSGHQAAFT 67 R+G + KYL+IGSNSF+GAS V YLL G DV+G+SRS EPH AFLPYRW F Sbjct: 15 RAGFD---KYLVIGSNSFTGASMVSYLLDQGADVVGISRSDEPHPAFLPYRWK-KADRFR 70 Query: 68 FYPYDLNKDLAALTELIQREKPAIVVNFAAQSMVAESWKNPEHWFETNVMATIRLHEVLR 127 F DLN DL A+ +L+ E+ ++NFAAQSMV ESW NP+HWF TNV++T+RLHE LR Sbjct: 71 FQKLDLNHDLDAIIQLVTAERFPCIINFAAQSMVGESWANPDHWFMTNVVSTVRLHERLR 130 Query: 128 QCDFLDKYVHITTPEVYGSTDGFIKEDTPFNPSTPYAVSRAAADMSLKTYFDAYGFPVVF 187 CDFL++YVH+TTPEVYG+ G + ED F+PSTPYAVSRAA DMSL++YF AYGFPV+F Sbjct: 131 ICDFLERYVHVTTPEVYGNATGTLTEDAVFDPSTPYAVSRAAGDMSLRSYFRAYGFPVLF 190 Query: 188 TRAANVYGPGQQLYRIIPRTILSVLTGKKLQLHGGGLSRRSFIHMRDVSSATHAIATRGI 247 TRAANVYGPGQ+LYRI+PRTIL + G+KLQLHGGG S RSFIH DV+ AT IA G Sbjct: 191 TRAANVYGPGQRLYRIVPRTILFIKLGRKLQLHGGGTSERSFIHAADVADATRRIACNGK 250 Query: 248 NGQTYHISTDEIVSVRELVERICAKLDVDFAANVEIVGERLGKDAAYMLDSSKLRQSLDW 307 G +YHISTD IV++R LVE ICA + V F VEIVGERLGKDAAY LDSSKLR L W Sbjct: 251 LGDSYHISTDRIVTIRALVEMICAMMRVRFEDQVEIVGERLGKDAAYKLDSSKLRSELGW 310 Query: 308 NVKVSLDEGLDECVSWVRQNLDAMQTMEWNYVHKP 342 + +++L++G+++ ++W+ + + +++ ++Y HKP Sbjct: 311 SDQITLEQGIEQTIAWIDRWFEELKSQPFDYAHKP 345 >ref|YP_004107779.1| NAD-dependent epimerase/dehydratase [Rhodopseudomonas palustris DX-1] gb|ADU43046.1| NAD-dependent epimerase/dehydratase [Rhodopseudomonas palustris DX-1] Length = 345 Score = 428 bits (1101), Expect = e-118, Method: Composition-based stats. Identities = 198/335 (59%), Positives = 257/335 (76%), Gaps = 4/335 (1%) Query: 8 RSGMNMSAKYLIIGSNSFSGASFVDYLLRNGNDVIGVSRSQEPHRAFLPYRWSGHQAAFT 67 R+G + KYL+IGSNSF+GAS V YLL G +V+G+SRS EPH AFLPYRW + F Sbjct: 15 RAGFD---KYLVIGSNSFTGASMVSYLLDQGAEVVGISRSDEPHPAFLPYRWK-NADRFR 70 Query: 68 FYPYDLNKDLAALTELIQREKPAIVVNFAAQSMVAESWKNPEHWFETNVMATIRLHEVLR 127 F+ DLN DL A+ +++ E+ ++NFAAQSMV ESW NP+HWF TNV++T+RLHE LR Sbjct: 71 FHRLDLNHDLDAIMQMVTAERFPCIINFAAQSMVGESWANPDHWFMTNVVSTVRLHERLR 130 Query: 128 QCDFLDKYVHITTPEVYGSTDGFIKEDTPFNPSTPYAVSRAAADMSLKTYFDAYGFPVVF 187 CDFL++YVH+TTPEVYG+ G + ED F+PSTPYAVSRAA DMSL++YF AYGFPV+F Sbjct: 131 TCDFLERYVHVTTPEVYGNATGTLTEDAVFDPSTPYAVSRAAGDMSLRSYFRAYGFPVLF 190 Query: 188 TRAANVYGPGQQLYRIIPRTILSVLTGKKLQLHGGGLSRRSFIHMRDVSSATHAIATRGI 247 TRAANVYGPGQ+LYRI+PRTIL + G+KLQLHGGG S RSFIH DV+ AT IA G Sbjct: 191 TRAANVYGPGQRLYRIVPRTILFIKLGRKLQLHGGGTSERSFIHAADVADATRRIACNGK 250 Query: 248 NGQTYHISTDEIVSVRELVERICAKLDVDFAANVEIVGERLGKDAAYMLDSSKLRQSLDW 307 G +YHISTD IV++R LVE ICA + F VEIVG+RLGKD+AY LDSSKLR L W Sbjct: 251 LGDSYHISTDRIVTIRALVEMICAMMGARFEDQVEIVGDRLGKDSAYKLDSSKLRSELGW 310 Query: 308 NVKVSLDEGLDECVSWVRQNLDAMQTMEWNYVHKP 342 + +++L++G+++ ++W+ + + +++ ++Y HKP Sbjct: 311 SDQITLEQGIEQTIAWIDRWFEELKSQPFDYAHKP 345 >ref|YP_487415.1| dTDP-glucose 4,6-dehydratase [Rhodopseudomonas palustris HaA2] gb|ABD08504.1| dTDP-glucose 4,6-dehydratase [Rhodopseudomonas palustris HaA2] Length = 345 Score = 426 bits (1094), Expect = e-117, Method: Composition-based stats. Identities = 200/328 (60%), Positives = 252/328 (76%), Gaps = 1/328 (0%) Query: 15 AKYLIIGSNSFSGASFVDYLLRNGNDVIGVSRSQEPHRAFLPYRWSGHQAAFTFYPYDLN 74 K L+IGSNSF+GA V LL +G +V+GVSRS EPH+AFLPYRW+ + F F DLN Sbjct: 19 GKVLVIGSNSFTGAEMVRDLLDHGAEVVGVSRSPEPHQAFLPYRWTNTER-FRFRQLDLN 77 Query: 75 KDLAALTELIQREKPAIVVNFAAQSMVAESWKNPEHWFETNVMATIRLHEVLRQCDFLDK 134 DL AL LI+ E+ ++NFAAQSMV ESW NP+HWF TNV++T+RLHE LR CDFLD+ Sbjct: 78 HDLDALMALIEAERCPWIINFAAQSMVGESWLNPDHWFMTNVVSTVRLHERLRHCDFLDR 137 Query: 135 YVHITTPEVYGSTDGFIKEDTPFNPSTPYAVSRAAADMSLKTYFDAYGFPVVFTRAANVY 194 YVH+TTPEVYG+ G + E+ PF+PSTPYAVSRAA DMSL++YF AY FPV++TRAANVY Sbjct: 138 YVHVTTPEVYGNATGTLTEEAPFDPSTPYAVSRAAGDMSLRSYFRAYQFPVLYTRAANVY 197 Query: 195 GPGQQLYRIIPRTILSVLTGKKLQLHGGGLSRRSFIHMRDVSSATHAIATRGINGQTYHI 254 GPGQ+LYRI+PRTIL + G+KLQLHGGG S RSFI DV+ AT IA G G TYHI Sbjct: 198 GPGQRLYRIVPRTILFIRLGRKLQLHGGGTSERSFIAASDVADATRRIAAAGTLGDTYHI 257 Query: 255 STDEIVSVRELVERICAKLDVDFAANVEIVGERLGKDAAYMLDSSKLRQSLDWNVKVSLD 314 +TD IV++RELVE ICA + V F +VEIVGERLGKD+AY LDS K+R+ L W+ +V+L+ Sbjct: 258 ATDRIVTIRELVELICATMGVKFEDHVEIVGERLGKDSAYRLDSGKIRRELGWSDRVTLE 317 Query: 315 EGLDECVSWVRQNLDAMQTMEWNYVHKP 342 +G+D+ + WV + D ++ ++Y HKP Sbjct: 318 QGIDDTIRWVDRWFDVLKDQPFDYAHKP 345