BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.5627.p (277 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_367579.1| glycosyltransferase-like protein [Burkholderia ... 240 2e-61 ref|ZP_02381189.1| Glycosyltransferase-like protein [Burkholderi... 230 2e-58 ref|ZP_02909396.1| conserved hypothetical protein [Burkholderia ... 176 4e-42 ref|ZP_02889791.1| conserved hypothetical protein [Burkholderia ... 174 1e-41 ref|ZP_04944248.1| hypothetical protein BDAG_00095 [Burkholderia... 174 1e-41 >ref|YP_367579.1| glycosyltransferase-like protein [Burkholderia sp. 383] gb|ABB06935.1| Glycosyltransferase-like protein [Burkholderia sp. 383] Length = 1121 Score = 240 bits (612), Expect = 2e-61, Method: Composition-based stats. Identities = 123/270 (45%), Positives = 171/270 (63%), Gaps = 2/270 (0%) Query: 6 LRTIFSSKVPIIYESDDLLNEIPADHPEAQQGAAWKTGIEFAVRHAKAVVVSTEFLAAKY 65 L TIF + P+IYE+DDLL ++PA HP A QG + GIE +R+A AVVVST F+A++Y Sbjct: 741 LYTIFKHEKPVIYETDDLLTDLPAAHPLAAQGGMARAGIELVLRNADAVVVSTPFIASRY 800 Query: 66 RELNAAVHVLPNYIDFDLFYRPVPQSTAPDGRINIGLLGSSIQPSNFALVDQALRALVER 125 R + VHVLP+ +DFD FYRPV + D + IG+ G+S++ NFALVD AL+A+ R Sbjct: 801 RLSHPRVHVLPDSVDFDRFYRPV--TARGDDCVTIGIAGASLRADNFALVDAALQAICTR 858 Query: 126 YGTRLHIDFVGWECPQGWAGHPLTTFHTFVHQYVDYAAQLRQWNWDIALIPLASDEYNQC 185 + ++ + FVG + P GWAGHP +H Y YA +L + WDIAL+PLA +YN Sbjct: 859 HPGKVRVSFVGTDVPPGWAGHPAAGCEPELHDYDAYAQRLPERRWDIALLPLADHDYNAG 918 Query: 186 KSYIKWLDYSAAGIASVFSDVSVYSQVVTHEVTGLLMPNSSQAWLDAITQLIESPGKRHA 245 S I+W +Y+AAGIAS+ SD Y + GLL+P++ QAW+DA+ +LI +P R Sbjct: 919 TSTIQWQEYAAAGIASIVSDRPAYRFALHDSCDGLLVPDAPQAWVDALDRLIANPALRRG 978 Query: 246 LAAAGQKEVREGFDLAAKAAHYHDVYSRCL 275 LA Q +VR+ L Y VY +C+ Sbjct: 979 LARTAQAKVRKHHALQQALPRYRHVYQQCI 1008 Score = 130 bits (326), Expect = 3e-28, Method: Composition-based stats. Identities = 95/276 (34%), Positives = 136/276 (49%), Gaps = 4/276 (1%) Query: 1 MSLDVLRTIFSSKVPIIYESDDLLNEIPADHPEAQQGAAWKTGIEFAVRHAKAVVVSTEF 60 +S L +FS P++ + D L+ + AD P A A K GI AV+ A A+VV +E Sbjct: 384 LSAATLEHLFSFGKPVVLDIDVPLDTLLADLPGAADNARRKAGIRSAVQRAHALVVPSEA 443 Query: 61 LAAKYRELNAAVHVLPNYIDFDLFYRPVPQSTAPDGRINIGLLGSSIQPSNFALVDQALR 120 L +YR +NA+VHVLP +D + +R P +N+ + G+ + V QAL Sbjct: 444 LVRQYRHVNASVHVLPTDVDLERLHRAAP---GVRNHVNLAVSGTGLDGVRLEQVRQALA 500 Query: 121 ALVERYGTRLHIDFVGWECPQGWAGHPLTTFHTFVHQYVDYAAQLRQWNWDIALIPLASD 180 L R+ +L + FVG P W P T Y YA L++ + DIAL+ Sbjct: 501 ELRRRFPGKLRVSFVGAALPASWDREPDVTLIAEPAPYDRYADALKRADLDIALVAAPVT 560 Query: 181 EYNQCKSYIKWLDYSAAGIASVFSDVSVYSQVVTHEVTGLLMPNSSQAWLDAITQLIESP 240 + WL+ SAAG A+V V H TG L+ +++ AW+DAI LIE P Sbjct: 561 LRDDAPPR-AWLECSAAGAATVLVATPAQGCSVVHGRTGWLVADTADAWVDAIAHLIEHP 619 Query: 241 GKRHALAAAGQKEVREGFDLAAKAAHYHDVYSRCLA 276 R LAAA Q +R D+ AA + +Y+R LA Sbjct: 620 QTRAQLAAAAQDAIRAQHDIGRNAARHGALYARLLA 655 >ref|ZP_02381189.1| Glycosyltransferase-like protein [Burkholderia ubonensis Bu] Length = 489 Score = 230 bits (586), Expect = 2e-58, Method: Composition-based stats. Identities = 118/270 (43%), Positives = 172/270 (63%), Gaps = 2/270 (0%) Query: 6 LRTIFSSKVPIIYESDDLLNEIPADHPEAQQGAAWKTGIEFAVRHAKAVVVSTEFLAAKY 65 LR IFS + P+IY++DDLL ++PA HP A QGA + GIEF +R+A AV+VST F A++Y Sbjct: 111 LRAIFSLRKPVIYDTDDLLTDLPAAHPLAAQGAMARAGIEFMLRNASAVIVSTPFAASRY 170 Query: 66 RELNAAVHVLPNYIDFDLFYRPVPQSTAPDGRINIGLLGSSIQPSNFALVDQALRALVER 125 R +HVLP+ +DF FYRPV +T D + IG+ G++++ NFALVD AL+A+ R Sbjct: 171 RMETPRIHVLPDNVDFVRFYRPV--ATRGDDCVTIGIAGAALRADNFALVDAALQAICAR 228 Query: 126 YGTRLHIDFVGWECPQGWAGHPLTTFHTFVHQYVDYAAQLRQWNWDIALIPLASDEYNQC 185 + ++ + F G P GWA HP TF ++ Y YA +L++ WDIAL+PLA D+Y+ Sbjct: 229 HPGKVKVCFAGPGAPAGWAAHPAATFEPALNDYDAYAQRLKEQRWDIALLPLADDDYHAG 288 Query: 186 KSYIKWLDYSAAGIASVFSDVSVYSQVVTHEVTGLLMPNSSQAWLDAITQLIESPGKRHA 245 KS I+W +Y+AAGIA++ SD Y + GLL ++ +AW+DA+ +LI +P R Sbjct: 289 KSTIRWQEYAAAGIATIVSDRPAYRFALNDGCDGLLAADAREAWIDALDRLIANPALRRG 348 Query: 246 LAAAGQKEVREGFDLAAKAAHYHDVYSRCL 275 LA Q +VR+ L + VY +C+ Sbjct: 349 LARTAQAKVRKHHALQQALPRHGQVYRQCV 378 >ref|ZP_02909396.1| conserved hypothetical protein [Burkholderia ambifaria MEX-5] gb|EDT39467.1| conserved hypothetical protein [Burkholderia ambifaria MEX-5] Length = 928 Score = 176 bits (446), Expect = 4e-42, Method: Composition-based stats. Identities = 108/274 (39%), Positives = 148/274 (54%), Gaps = 8/274 (2%) Query: 1 MSLDVLRTIFSSKVPIIYESDDLLNEIPADHPEAQQGAAWKTGIEFAVRHAKAVVVSTEF 60 + L L IF P+IY +D L A P Q A W TGI F + +A A++V T Sbjct: 546 LPLKALSAIFEFDKPVIYATDLPL----AAQPTTQADATW-TGIAFTLGNAHAIIVPTPD 600 Query: 61 LAAKYRELNAAVHVLPNYIDFDLFYRPVPQSTAPDGRINIGLLGSSIQPSNFALVDQALR 120 LA +YR N V VLP+ +D DLF R VP D R+ IG+ G+S+ P+NFA VD ALR Sbjct: 601 LARQYRPWNPNVFVLPDSVDLDLFLRAVPARG--DARVTIGVAGASLLPANFARVDAALR 658 Query: 121 ALVERYGTRLHIDFVGWECPQGWAGHPLTTFHTFVHQYVDYAAQLRQWNWDIALIPLASD 180 AL ER+ R+ + F+G + P GWA HP F Y YA QLR +WD+AL+PLA D Sbjct: 659 ALCERHAGRIAVQFLGAQVPAGWAHHPAAEFRPAPDGYRAYAQQLRALDWDVALMPLA-D 717 Query: 181 EYNQCKSYIKWLDYSAAGIASVFSDVSVYSQVVTHEVTGLLMPNSSQAWLDAITQLIESP 240 + S I+ +++AAGIA V SD GLL +++ AW DA+ +++ P Sbjct: 718 TDDGAASAIQRQEFAAAGIAVVSSDRPALRITFNDGDDGLLAGDTAHAWDDALERVVTQP 777 Query: 241 GKRHALAAAGQKEVREGFDLAAKAAHYHDVYSRC 274 R +A Q VR+ L A+ ++Y C Sbjct: 778 ALRRRIARTAQARVRKHDALQARLPLVREIYRMC 811 >ref|ZP_02889791.1| conserved hypothetical protein [Burkholderia ambifaria IOP40-10] gb|EDT04614.1| conserved hypothetical protein [Burkholderia ambifaria IOP40-10] Length = 928 Score = 174 bits (442), Expect = 1e-41, Method: Composition-based stats. Identities = 106/274 (38%), Positives = 149/274 (54%), Gaps = 8/274 (2%) Query: 1 MSLDVLRTIFSSKVPIIYESDDLLNEIPADHPEAQQGAAWKTGIEFAVRHAKAVVVSTEF 60 + L L IF P+IY +D L A P Q + W TGI F + +A A++V T Sbjct: 546 LPLKALSAIFEFDKPVIYATDLPL----AAQPTTQADSTW-TGIAFTLGNAHAIIVPTPD 600 Query: 61 LAAKYRELNAAVHVLPNYIDFDLFYRPVPQSTAPDGRINIGLLGSSIQPSNFALVDQALR 120 LA +YR N V VLP+ +D DLF R VP D R+ IG+ G+S+ P+NFA VD ALR Sbjct: 601 LARQYRPWNPNVFVLPDSVDLDLFLRAVPARG--DARVTIGVAGASLLPANFARVDAALR 658 Query: 121 ALVERYGTRLHIDFVGWECPQGWAGHPLTTFHTFVHQYVDYAAQLRQWNWDIALIPLASD 180 AL ER+ R+ + F+G + P GWA HP F Y YA QLR +WD+AL+PLA D Sbjct: 659 ALCERHAGRIAVQFLGAQVPAGWADHPAAEFRPAPDGYRTYAQQLRALDWDVALMPLA-D 717 Query: 181 EYNQCKSYIKWLDYSAAGIASVFSDVSVYSQVVTHEVTGLLMPNSSQAWLDAITQLIESP 240 + S I+ +++AAGIA V SD ++ LL +++ AW DA+ +++ P Sbjct: 718 TDDGAASVIQRQEFAAAGIAVVASDRPALRITLSDGDDALLAGDTAHAWGDALERVVTQP 777 Query: 241 GKRHALAAAGQKEVREGFDLAAKAAHYHDVYSRC 274 R +A Q VR+ L A+ ++Y C Sbjct: 778 ALRRRIARTAQARVRKHDALQARLPLVREIYRMC 811 >ref|ZP_04944248.1| hypothetical protein BDAG_00095 [Burkholderia dolosa AUO158] gb|EAY67419.1| hypothetical protein BDAG_00095 [Burkholderia dolosa AUO158] Length = 945 Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats. Identities = 106/270 (39%), Positives = 141/270 (52%), Gaps = 7/270 (2%) Query: 6 LRTIFSSKVPIIYESDDLLNEIPADHPEAQQGAAWKTGIEFAVRHAKAVVVSTEFLAAKY 65 L I P+IY +D PAD A AW GI V +A A+VV T +LA Y Sbjct: 567 LDAILEFGKPVIYATD----TAPADAGSAHDDPAW-AGIAHTVANAHAIVVPTPYLAGLY 621 Query: 66 RELNAAVHVLPNYIDFDLFYRPVPQSTAPDGRINIGLLGSSIQPSNFALVDQALRALVER 125 R+ N V VLP+ ++F+LF+RPVP D R+ +G+ G+S+ P NFA+VD ALR L R Sbjct: 622 RQWNPRVFVLPDAVEFELFHRPVP--VRADARVTVGVAGASLLPENFAVVDAALRTLCAR 679 Query: 126 YGTRLHIDFVGWECPQGWAGHPLTTFHTFVHQYVDYAAQLRQWNWDIALIPLASDEYNQC 185 + R+ + F G P GW HP F Y YA QLR +WDIAL+PLA E N Sbjct: 680 HAGRIAVQFFGSAVPAGWDDHPAAQFVPASDTYRAYAEQLRALDWDIALMPLADTERNAG 739 Query: 186 KSYIKWLDYSAAGIASVFSDVSVYSQVVTHEVTGLLMPNSSQAWLDAITQLIESPGKRHA 245 S I+ L+ +AAGIA V SD + LL +++ AW+ AI LI P R Sbjct: 740 ASPIQRLELAAAGIAIVTSDRPAARAELDDGDDALLAGDTADAWVAAIDTLIAEPALRRR 799 Query: 246 LAAAGQKEVREGFDLAAKAAHYHDVYSRCL 275 +A Q VR+ L + D+Y C+ Sbjct: 800 IARTAQARVRKRDALHTRLPLLRDIYRACV 829