BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.5619.p (564 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_002975106.1| hypothetical protein Rleg_1275 [Rhizobium le... 103 1e-19 ref|YP_002280706.1| hypothetical protein Rleg2_1186 [Rhizobium l... 101 3e-19 ref|YP_767232.1| hypothetical protein RL1628 [Rhizobium legumino... 99 2e-18 ref|ZP_03523161.1| hypothetical protein RetlG_18883 [Rhizobium e... 97 8e-18 ref|YP_004475965.1| hypothetical protein Psefu_3915 [Pseudomonas... 96 2e-17 >ref|YP_002975106.1| hypothetical protein Rleg_1275 [Rhizobium leguminosarum bv. trifolii WSM1325] gb|ACS55567.1| hypothetical protein Rleg_1275 [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 268 Score = 103 bits (256), Expect = 1e-19, Method: Composition-based stats. Identities = 66/216 (30%), Positives = 105/216 (48%), Gaps = 10/216 (4%) Query: 340 HPIVAGMLGNFALRNLILRDYPHVKRVGVCLYRKFISRERISGVPAEDNWMMDVVSDKEF 399 H ++G LG + ++ + + + + YRKF++R +I G P + M+ + +E Sbjct: 52 HAKLSGSLGTIVIAKVVSEEAAKPRNITIWQYRKFLTRLKI-GTPNPEYPGMNTATSEEV 110 Query: 400 ARLSLEQMMEPGEQEFLVGKTCGFKVSGRDAGYLSHYAVSHHAEDLLRYAAAATELGVFA 459 + E E FL +S HYA H+ D LRY A A E Sbjct: 111 GIIKPENPAIFTESFFLPRPLNLHNIS-------QHYARFHNIVDFLRYTAFAIEANTLT 163 Query: 460 RSEAELFFNEKTFFMGGIEMGVFPADFWLRTVEQIEAVTWYCVQHYD--TRREGYQSRAW 517 ++EA FFN TF GGIE+G +P D+WL T ++ A ++ + Y + Q RA Sbjct: 164 QAEALQFFNSSTFVPGGIELGTYPTDWWLDTFVRLVAPSFEFAKRYQPFQSEDPVQKRAI 223 Query: 518 AFCAERLGSYLLLRELRARYGDPGYMRFFGQLNLIT 553 +FC ERLGSYLL++ + YG+ FG++ ++ Sbjct: 224 SFCQERLGSYLLIKRIAELYGNSLPGSLFGEIATVS 259 >ref|YP_002280706.1| hypothetical protein Rleg2_1186 [Rhizobium leguminosarum bv. trifolii WSM2304] gb|ACI54480.1| hypothetical protein Rleg2_1186 [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 268 Score = 101 bits (252), Expect = 3e-19, Method: Composition-based stats. Identities = 66/216 (30%), Positives = 104/216 (48%), Gaps = 10/216 (4%) Query: 340 HPIVAGMLGNFALRNLILRDYPHVKRVGVCLYRKFISRERISGVPAEDNWMMDVVSDKEF 399 H ++G LG + ++ + + + + YRKF++R +I G P D M+ + +E Sbjct: 52 HAKLSGSLGTIVVAKVVSEESAKPRNITIWQYRKFLTRLKI-GTPNPDYPGMNTATSEEV 110 Query: 400 ARLSLEQMMEPGEQEFLVGKTCGFKVSGRDAGYLSHYAVSHHAEDLLRYAAAATELGVFA 459 E + FL +S HYA H+ D LRY A A E Sbjct: 111 GTTRPEDPALFSDSFFLPRPLNLHNIS-------QHYARFHNIVDFLRYTAFAIEANTLT 163 Query: 460 RSEAELFFNEKTFFMGGIEMGVFPADFWLRTVEQIEAVTWYCVQHYDTRR--EGYQSRAW 517 ++EA FFN TF GGIE+G +P D+WL T ++ A ++ + Y + + Q RA Sbjct: 164 QAEALQFFNSSTFVPGGIELGTYPTDWWLDTFVRMVAPSFEFAKRYQPFQADDPVQKRAI 223 Query: 518 AFCAERLGSYLLLRELRARYGDPGYMRFFGQLNLIT 553 +FC ERLGSYLL++ + YG+ FG + ++ Sbjct: 224 SFCQERLGSYLLVKRIAELYGNTLPGSLFGDITTVS 259 >ref|YP_767232.1| hypothetical protein RL1628 [Rhizobium leguminosarum bv. viciae 3841] emb|CAK07123.1| hypothetical protein RL1628 [Rhizobium leguminosarum bv. viciae 3841] Length = 258 Score = 99.0 bits (245), Expect = 2e-18, Method: Composition-based stats. Identities = 67/218 (30%), Positives = 107/218 (49%), Gaps = 14/218 (6%) Query: 340 HPIVAGMLGNFALRNLILRDYPHVKRVGVCLYRKFISRERISGVPAEDNWMMDVVSDKEF 399 H ++G LG + ++ + + + + YRKF++R +I G P + M+ + +E Sbjct: 42 HAKLSGSLGTIVIAKVVSEESAKPRNITIWQYRKFLTRLKI-GTPNPEYPGMNTTNSEEV 100 Query: 400 ARLSLEQMMEPGEQEFLVGKTCGFKVSGRDAGYLSHYAVSHHAEDLLRYAAAATELGVFA 459 E E FL +S HYA H+ D LRY A + E Sbjct: 101 LVTKPENPAHFTENFFLPRPLNLQNIS-------RHYARFHNIVDFLRYTAFSIEANTLT 153 Query: 460 RSEAELFFNEKTFFMGGIEMGVFPADFWLRTVEQIEAVTWYCVQHYD--TRREGYQSRAW 517 ++EA FFN TF GGIE+G +P D+WL T ++ A ++ + Y + Q RA Sbjct: 154 QAEALHFFNSSTFVPGGIELGTYPTDWWLDTFVRLVAPSFEFAKRYQPFQAEDPVQKRAI 213 Query: 518 AFCAERLGSYLLLRELRARYGD--PGYMRFFGQLNLIT 553 +FC ERLGSYLL++ + YG+ PG + FG++ ++ Sbjct: 214 SFCQERLGSYLLIKRIAELYGNNLPGSL--FGEIATVS 249 >ref|ZP_03523161.1| hypothetical protein RetlG_18883 [Rhizobium etli GR56] Length = 291 Score = 97.1 bits (240), Expect = 8e-18, Method: Composition-based stats. Identities = 66/218 (30%), Positives = 105/218 (48%), Gaps = 14/218 (6%) Query: 340 HPIVAGMLGNFALRNLILRDYPHVKRVGVCLYRKFISRERISGVPAEDNWMMDVVSDKEF 399 H ++G LG + ++ + + + + YRKF++R +I G P + M++ + +E Sbjct: 75 HAKLSGSLGTLVIAKVVSEETVKPRNITIWQYRKFLTRLKI-GTPNPEYPGMNIATTEEV 133 Query: 400 ARLSLEQMMEPGEQEFLVGKTCGFKVSGRDAGYLSHYAVSHHAEDLLRYAAAATELGVFA 459 E E FL +S HYA H+ D RY A + E Sbjct: 134 EITRPENPAFFSEGFFLPRPLNLHNIS-------YHYAGCHNIVDFFRYTAFSVEANTLT 186 Query: 460 RSEAELFFNEKTFFMGGIEMGVFPADFWLRTVEQIEAVTWYCVQHYD--TRREGYQSRAW 517 ++EA FFN T GGIE+G +P D+WL T ++ A + + Y + Q RA Sbjct: 187 QAEALHFFNSGTLVPGGIELGTYPTDWWLDTFVRLVAPSLEFAKRYQPFQAEDPVQKRAI 246 Query: 518 AFCAERLGSYLLLRELRARYGD--PGYMRFFGQLNLIT 553 +FC ERLGSYLL++ L YG+ PG++ FG + ++ Sbjct: 247 SFCQERLGSYLLIKRLAELYGNNLPGFL--FGDMATVS 282 >ref|YP_004475965.1| hypothetical protein Psefu_3915 [Pseudomonas fulva 12-X] gb|AEF23871.1| hypothetical protein Psefu_3915 [Pseudomonas fulva 12-X] Length = 272 Score = 95.9 bits (237), Expect = 2e-17, Method: Composition-based stats. Identities = 70/211 (33%), Positives = 103/211 (48%), Gaps = 9/211 (4%) Query: 3 IHLLQLA---PTTVPVAPGFQHV--LTPAPDAWGDLLAMRRFFHEQAIDGEACYAFVTTA 57 IHL +A T + GF+ + + D W + +RRF EQ +D EA Y F + Sbjct: 10 IHLFHIAYSDATLEGMPAGFELLDNMAHERDDWREYWPIRRFLLEQPLDEEAWYGFFSPR 69 Query: 58 FLGQTGLDAAGVRSLIEANPQAAA--WTFMPHPLEACGQLNLLLQAEQHLEGFAALAKRF 115 F + GLDA VR ++A A TF P P LN+ Q + GF +++ F Sbjct: 70 FKEKIGLDALHVREFVQAAAATGADVCTFSPQPDMGAFFLNVFEQEDLFHPGFLDISQAF 129 Query: 116 LQALGLQLDPLHFVPQWQNNVPHGFIAAKPAFWQTWFDLAERLFQMAEQEPGELHAALQR 175 ++ +GL + V + V +I A+PAFW+ W L E+LF + EQ GEL L+R Sbjct: 130 VRHVGLDVALRQLVMDSRQIVFSNYIVARPAFWRRWLALNEQLFALCEQGEGELADGLRR 189 Query: 176 QAVSGES--GRSLLAARLGSLVLGLDQQLRV 204 ++ S + L RL SL+L L+ RV Sbjct: 190 ESSYPGSVPCKVFLMERLASLILTLEPNWRV 220