BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.5572.p (237 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777720.1| multiple antibiotic resistance protein [Herb... 399 e-109 ref|YP_001099747.1| putative multiple antibiotic resistance prot... 295 5e-78 ref|YP_001353588.1| multiple antibiotic resistance protein MarC ... 292 3e-77 ref|NP_889139.1| multiple antibiotic resistance protein [Bordete... 172 3e-41 ref|NP_902399.1| multiple antibiotic resistance protein MarC [Ch... 169 3e-40 >ref|YP_003777720.1| multiple antibiotic resistance protein [Herbaspirillum seropedicae SmR1] gb|ADJ65812.1| multiple antibiotic resistance protein [Herbaspirillum seropedicae SmR1] Length = 229 Score = 399 bits (1024), Expect = e-109, Method: Composition-based stats. Identities = 228/229 (99%), Positives = 229/229 (100%) Query: 9 MFILFLKAVVLIPVTLLPILNPLGIAPVFANLLGNVSRSTEKRIARQVAINCWFMLVAAI 68 MFILFLKAVVLIPVTLLPILNPLGIAPVFANLLGNVSRSTEKRIARQVAINCWFMLVAAI Sbjct: 1 MFILFLKAVVLIPVTLLPILNPLGIAPVFANLLGNVSRSTEKRIARQVAINCWFMLVAAI 60 Query: 69 FIGSHVLTFFGISLPIVRVGGGLLVAVSGWKLLNDNSQDSSIPTQVAKTYDEDLPDDEIK 128 FIGSHVLTFFGISLPIVRVGGGLLVAVSGWKLLNDNSQDSSIPTQVAKTYDEDLPDDEIK Sbjct: 61 FIGSHVLTFFGISLPIVRVGGGLLVAVSGWKLLNDNSQDSSIPTQVAKTYDEDLPDDEIK 120 Query: 129 ARSFYPMSFPLTVGPGTIAASITLGANTPTRLLDWVISVGSAALGAALTALVIFLCYNYA 188 ARSFYPMSFPLTVGPGTIAASITLGANTPTRLLDWVISVGSAALGAALTALVIFLCYNYA Sbjct: 121 ARSFYPMSFPLTVGPGTIAASITLGANTPTRLLDWVISVGSAALGAALTALVIFLCYNYA 180 Query: 189 HKLVHLMGRLGTMVVLRLSAFILLCIGIQIFWSGMSALLAEAGISGVSP 237 HKLVHLMGRLGTMVVLRLSAFILLCIGIQIFWSGMSALLAEAGISGV+P Sbjct: 181 HKLVHLMGRLGTMVVLRLSAFILLCIGIQIFWSGMSALLAEAGISGVAP 229 >ref|YP_001099747.1| putative multiple antibiotic resistance protein MarC [Herminiimonas arsenicoxydans] emb|CAL61620.1| putative multiple antibiotic resistance protein MarC [Herminiimonas arsenicoxydans] Length = 226 Score = 295 bits (754), Expect = 5e-78, Method: Composition-based stats. Identities = 158/225 (70%), Positives = 187/225 (83%), Gaps = 1/225 (0%) Query: 9 MFILFLKAVVLIPVTLLPILNPLGIAPVFANLLGNVSRSTEKRIARQVAINCWFMLVAAI 68 M ILF KA +LIP+TL+PILNP G A +FA+L G++ R EKR+ARQVAINC+ ML+ + Sbjct: 1 MLILFFKAAILIPITLVPILNPFGNAAIFASLAGDIDRDAEKRLARQVAINCFVMLLGTM 60 Query: 69 FIGSHVLTFFGISLPIVRVGGGLLVAVSGWKLLNDNSQDSSIPTQVAKTYDEDLPDDEIK 128 FIGSHVL FFGISLPIVR+GGG+LVA +GW+LLND QD I TQVA E +D+ K Sbjct: 61 FIGSHVLMFFGISLPIVRIGGGILVAATGWRLLNDKGQDD-IRTQVASKPREVWSEDDFK 119 Query: 129 ARSFYPMSFPLTVGPGTIAASITLGANTPTRLLDWVISVGSAALGAALTALVIFLCYNYA 188 RSFYP+SFPLTVGPGTIAASITLGA+ P+RL + +S+GSAALGAA+TALVIFLCY YA Sbjct: 120 VRSFYPISFPLTVGPGTIAASITLGASAPSRLSNLFVSIGSAALGAAMTALVIFLCYRYA 179 Query: 189 HKLVHLMGRLGTMVVLRLSAFILLCIGIQIFWSGMSALLAEAGIS 233 +K+V L+GRLGTMVVLRLSAFILLCIGI+IFW GM LLAEAGI+ Sbjct: 180 NKMVRLLGRLGTMVVLRLSAFILLCIGIEIFWQGMLGLLAEAGIT 224 >ref|YP_001353588.1| multiple antibiotic resistance protein MarC [Janthinobacterium sp. Marseille] gb|ABR90356.1| multiple antibiotic resistance protein MarC [Janthinobacterium sp. Marseille] Length = 226 Score = 292 bits (748), Expect = 3e-77, Method: Composition-based stats. Identities = 157/225 (69%), Positives = 192/225 (85%), Gaps = 1/225 (0%) Query: 9 MFILFLKAVVLIPVTLLPILNPLGIAPVFANLLGNVSRSTEKRIARQVAINCWFMLVAAI 68 M ILF KA +L+P+T+LPI+NP G APVFA+LLGNVSR EK++ARQVA+NC+F+L+ A+ Sbjct: 1 MLILFFKAAILVPITMLPIINPFGNAPVFASLLGNVSRDVEKKLARQVALNCFFLLLGAM 60 Query: 69 FIGSHVLTFFGISLPIVRVGGGLLVAVSGWKLLNDNSQDSSIPTQVAKTYDEDLPDDEIK 128 FIGSHVL FFGIS+PIVR+ GGLLVA + W+LLNDN QD+ I TQVA E D+E K Sbjct: 61 FIGSHVLMFFGISIPIVRISGGLLVAFTAWRLLNDNGQDA-IRTQVATAPMEAWSDEEFK 119 Query: 129 ARSFYPMSFPLTVGPGTIAASITLGANTPTRLLDWVISVGSAALGAALTALVIFLCYNYA 188 RSFYP+SFPLTVGPG IAASITLGA+TP RLLD VIS+GSAA+GAA+TA VI+LCYN A Sbjct: 120 VRSFYPISFPLTVGPGAIAASITLGASTPARLLDQVISLGSAAVGAAMTAFVIWLCYNSA 179 Query: 189 HKLVHLMGRLGTMVVLRLSAFILLCIGIQIFWSGMSALLAEAGIS 233 +K+V ++GRLGTMV+LRLSAFILLCIG++IFW+G+ LL EAGI+ Sbjct: 180 NKMVKMLGRLGTMVMLRLSAFILLCIGVEIFWTGVVGLLVEAGIA 224 >ref|NP_889139.1| multiple antibiotic resistance protein [Bordetella bronchiseptica RB50] emb|CAE33095.1| putative multiple antibiotic resistance protein [Bordetella bronchiseptica RB50] Length = 237 Score = 172 bits (437), Expect = 3e-41, Method: Composition-based stats. Identities = 97/222 (43%), Positives = 144/222 (64%), Gaps = 7/222 (3%) Query: 10 FILFLKAVVLIPVTLLPILNPLGIAPVFANLLGNVSRSTEKRIARQVAINCWFMLVAAIF 69 ++F ++ TLLP LNP I P+F L S+ T +++++VAIN M++ A+ Sbjct: 7 LLVFGRSFFFALATLLPFLNPPAITPIFWTLTEGASKQTRAQLSKRVAINVALMMIGAMI 66 Query: 70 IGSHVLTFFGISLPIVRVGGGLLVAVSGWKLLNDNSQDSSIPTQVAKTYDEDLPDDEIKA 129 G+ VL+FFGISL IVRVGGG+LV S W+L+N D+S Q+A+++ ++ +A Sbjct: 67 AGNVVLSFFGISLAIVRVGGGMLVIYSAWRLVNSPDADTSRHAQMAESFTPEMA----QA 122 Query: 130 RSFYPMSFPLTVGPGTIAASITLGAN--TPTRLLDWVISVGSAALGAALTALVIFLCYNY 187 R+FYP++FP++ GPGTIAA IT+GA+ +L GS G AL A +F+C + Sbjct: 123 RAFYPLTFPISCGPGTIAACITVGASLRDENHMLSLARLAGSLP-GVALVAFTLFICLRF 181 Query: 188 AHKLVHLMGRLGTMVVLRLSAFILLCIGIQIFWSGMSALLAE 229 A +++H +G GT V +RLSAFI+LC+G+QIFWSG S LL + Sbjct: 182 AAQMLHRLGDNGTAVFMRLSAFIMLCLGVQIFWSGASELLLD 223 >ref|NP_902399.1| multiple antibiotic resistance protein MarC [Chromobacterium violaceum ATCC 12472] gb|AAQ60399.1| probable multiple antibiotic resistance protein MarC [Chromobacterium violaceum ATCC 12472] Length = 233 Score = 169 bits (428), Expect = 3e-40, Method: Composition-based stats. Identities = 87/220 (39%), Positives = 143/220 (65%), Gaps = 6/220 (2%) Query: 13 FLKAVVLIPVTLLPILNPLGIAPVFANLLGNVSRSTEKRIARQVAINCWFMLVAAIFIGS 72 F+ + + LLPI+NP G+ P+F ++ + + +AR++AI C +LV ++F+G Sbjct: 7 FITKFLFVMAALLPIMNPPGLVPIFISMTARNTPQQRRYLARRIAIYCALLLVGSMFVGG 66 Query: 73 HVLTFFGISLPIVRVGGGLLVAVSGWKLLNDNSQDSSIPTQVAKTYDEDLPDDEIKARSF 132 +VL+FFG+SLP+V++ GGLL+ + W++LND +SS P+ D E+K R+F Sbjct: 67 YVLSFFGVSLPVVQMSGGLLITFAAWRMLNDTPAESSQPSAEQARVDSQA---ELKQRAF 123 Query: 133 YPMSFPLTVGPGTIAASITLGAN---TPTRLLDWVISVGSAALGAALTALVIFLCYNYAH 189 YP++FPLTVGPG+++ +IT+GA + L+ +VIS + + + +++LCY A Sbjct: 124 YPLTFPLTVGPGSVSVAITIGATLTGSGKGLVRFVISPIAGLSAVLVGSTLVYLCYANAD 183 Query: 190 KLVHLMGRLGTMVVLRLSAFILLCIGIQIFWSGMSALLAE 229 KL+ +G+ G++V LRLSAFILLC+G+QI W G L ++ Sbjct: 184 KLLRYLGQTGSVVFLRLSAFILLCLGVQIMWDGFGELASQ 223