BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.5569.p         (35 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003777717.1| hypothetical protein Hsero_4341 [Herbaspiril...    72   4e-11
ref|ZP_02379639.1| hypothetical protein BuboB_18037 [Burkholderi...    57   1e-06
ref|YP_004754794.1| hypothetical protein CFU_4149 [Collimonas fu...    55   4e-06
gb|EGC98026.1| hypothetical protein B1M_43685 [Burkholderia sp. ...    54   6e-06
ref|YP_001579809.1| hypothetical protein Bmul_1624 [Burkholderia...    54   6e-06

>ref|YP_003777717.1| hypothetical protein Hsero_4341 [Herbaspirillum seropedicae SmR1]
 gb|ADJ65809.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1]
          Length = 422

 Score = 71.6 bits (174), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 35/35 (100%), Positives = 35/35 (100%)

Query: 1   MQLIESHPHFAMKKVQSAAEIYPVFRELFEKQVHA 35
           MQLIESHPHFAMKKVQSAAEIYPVFRELFEKQVHA
Sbjct: 388 MQLIESHPHFAMKKVQSAAEIYPVFRELFEKQVHA 422


>ref|ZP_02379639.1| hypothetical protein BuboB_18037 [Burkholderia ubonensis Bu]
          Length = 422

 Score = 57.0 bits (136), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 26/32 (81%), Positives = 30/32 (93%)

Query: 2   QLIESHPHFAMKKVQSAAEIYPVFRELFEKQV 33
           QL++S PH AMKKV+SAA+IYPVFRELFEKQV
Sbjct: 388 QLMQSQPHLAMKKVESAADIYPVFRELFEKQV 419


>ref|YP_004754794.1| hypothetical protein CFU_4149 [Collimonas fungivorans Ter331]
 gb|AEK63971.1| protein of unknown function DUF444 [Collimonas fungivorans Ter331]
          Length = 421

 Score = 54.7 bits (130), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 25/34 (73%), Positives = 30/34 (88%)

Query: 2   QLIESHPHFAMKKVQSAAEIYPVFRELFEKQVHA 35
           Q+   +P FAMKKVQ+A+EIYPVFRELFEKQVH+
Sbjct: 388 QIAAVNPQFAMKKVQAASEIYPVFRELFEKQVHS 421


>gb|EGC98026.1| hypothetical protein B1M_43685 [Burkholderia sp. TJI49]
          Length = 422

 Score = 54.3 bits (129), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 26/32 (81%), Positives = 28/32 (87%)

Query: 2   QLIESHPHFAMKKVQSAAEIYPVFRELFEKQV 33
           QL  S PH AMKKV+SAA+IYPVFRELFEKQV
Sbjct: 388 QLALSQPHLAMKKVESAADIYPVFRELFEKQV 419


>ref|YP_001579809.1| hypothetical protein Bmul_1624 [Burkholderia multivorans ATCC
           17616]
 ref|YP_001946077.1| hypothetical protein BMULJ_01620 [Burkholderia multivorans ATCC
           17616]
 ref|ZP_03570941.1| conserved hypothetical protein [Burkholderia multivorans CGD2M]
 ref|ZP_03577564.1| conserved hypothetical protein [Burkholderia multivorans CGD2]
 ref|ZP_03585946.1| conserved hypothetical protein [Burkholderia multivorans CGD1]
 gb|ABX15312.1| protein of unknown function DUF444 [Burkholderia multivorans ATCC
           17616]
 dbj|BAG43541.1| conserved hypothetical protein [Burkholderia multivorans ATCC
           17616]
 gb|EED99653.1| conserved hypothetical protein [Burkholderia multivorans CGD1]
 gb|EEE07834.1| conserved hypothetical protein [Burkholderia multivorans CGD2]
 gb|EEE14228.1| conserved hypothetical protein [Burkholderia multivorans CGD2M]
          Length = 422

 Score = 54.3 bits (129), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 26/32 (81%), Positives = 28/32 (87%)

Query: 2   QLIESHPHFAMKKVQSAAEIYPVFRELFEKQV 33
           QL  S PH AMKKV+SAA+IYPVFRELFEKQV
Sbjct: 388 QLALSQPHLAMKKVESAADIYPVFRELFEKQV 419