BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.5557.p (447 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003909222.1| major facilitator superfamily protein [Burkh... 456 e-126 ref|YP_004231867.1| major facilitator superfamily protein [Burkh... 450 e-124 ref|YP_004228551.1| major facilitator superfamily protein [Burkh... 447 e-123 ref|YP_003610292.1| major facilitator superfamily MFS_1 [Burkhol... 443 e-122 ref|YP_001895395.1| major facilitator superfamily protein [Burkh... 375 e-102 >ref|YP_003909222.1| major facilitator superfamily protein [Burkholderia sp. CCGE1003] gb|ADN59931.1| major facilitator superfamily MFS_1 [Burkholderia sp. CCGE1003] Length = 430 Score = 456 bits (1173), Expect = e-126, Method: Composition-based stats. Identities = 257/437 (58%), Positives = 325/437 (74%), Gaps = 11/437 (2%) Query: 13 SSAAEAAPAPMSAARTRRLIVASSIGNALEWFDFVAYGFFAVTISKLFFPTGDETVSLLV 72 S+ E S RRLIVA+S+GNALEWFDF AYGFFAVT+SKLFFP DETVSLL+ Sbjct: 3 STVIEDRVQQTSGTPMRRLIVATSVGNALEWFDFAAYGFFAVTLSKLFFPAHDETVSLLL 62 Query: 73 TFATFGLSYLFRPLGAILLGWYGDKVGRKPALLVSLSMTVAGTLICTVIPTYETIGVAAP 132 TF TFGLSY+FRPLGA+LLG Y D+ GRK ALLVSL++T GTLIC VIPTY +IG+AAP Sbjct: 63 TFGTFGLSYVFRPLGALLLGRYADRHGRKAALLVSLALTTIGTLICAVIPTYASIGLAAP 122 Query: 133 IGILVARILLALSAGGEFGSATALLTETGSKRRAFMASWQFSSQGAAALMAALAGFLLNQ 192 IG++ ARIL++ S GGEFGS TAL+ E SKR+AF+ASWQFSSQG + ++A+ AG L+ Sbjct: 123 IGLMTARILISFSTGGEFGSGTALMIEQKSKRKAFLASWQFSSQGMSTVLASCAGLALST 182 Query: 193 WLTPEQISAWGWRLPFAFGLLIAPVGLYIRRHIDEVPMAKKAQVAGEDDASWGLQVT--R 250 L+P QI +WGWR PF FGLL+APVGLYIR+HID+ A A L + R Sbjct: 183 QLSPAQIESWGWRAPFIFGLLVAPVGLYIRKHIDDTLPAAGHATARNAPVRELLAHSKGR 242 Query: 251 VLVAMGILSVSTAATYLMLLYMPTYAIKQLHLPQSTALYRTRLKKTPPPAAVTGAILMIG 310 +L+A GI++VSTAA+YLM+LYMPTYA+KQLHLP ST T VTG ILM+ Sbjct: 243 ILIAAGIMAVSTAASYLMILYMPTYAVKQLHLPASTGFAAT---------VVTGTILMVF 293 Query: 311 APFMGMLADRVGRARIMVVSTVLTLATIYGSFVWVIAMPTVWVMMAIMIWAGILKAVYFG 370 P MG L+DR GR+R+MV+S + TL TIY FVW+I P+ V+MAIM AG LKA+YFG Sbjct: 294 TPLMGHLSDRYGRSRMMVISAIATLVTIYPCFVWLIKSPSFAVLMAIMSLAGALKAIYFG 353 Query: 371 SLGVVLSSIFPPATRVRGMGISYSLGATLFGGFTPFMVTWLVGKTGNPVSPSYYLMVCAA 430 L VLSS+FP + R G+G SY++G +FGGFTP++VT ++G T +P+SP++YLM CAA Sbjct: 354 PLAAVLSSLFPTSVRSTGLGFSYNIGVMVFGGFTPWLVTAMIGATHDPLSPAFYLMACAA 413 Query: 431 ISLLCVSIYHFRLKKYL 447 +SL C+++YHF+L K++ Sbjct: 414 LSLACIALYHFKLVKHI 430 >ref|YP_004231867.1| major facilitator superfamily protein [Burkholderia sp. CCGE1001] gb|ADX58807.1| major facilitator superfamily protein [Burkholderia sp. CCGE1001] Length = 430 Score = 450 bits (1157), Expect = e-124, Method: Composition-based stats. Identities = 255/437 (58%), Positives = 323/437 (73%), Gaps = 11/437 (2%) Query: 13 SSAAEAAPAPMSAARTRRLIVASSIGNALEWFDFVAYGFFAVTISKLFFPTGDETVSLLV 72 S+ E P S RRLIVA+SIGNALEWFDF AYGFFAVT+SKLFFP DETVSLL+ Sbjct: 3 STVIEDRVQPKSTTPMRRLIVATSIGNALEWFDFAAYGFFAVTLSKLFFPAHDETVSLLL 62 Query: 73 TFATFGLSYLFRPLGAILLGWYGDKVGRKPALLVSLSMTVAGTLICTVIPTYETIGVAAP 132 TF TFGLSY+FRPLGA+LLG Y D+ GRK ALL +L++T GTLIC VIPTY +IG+AAP Sbjct: 63 TFGTFGLSYVFRPLGALLLGRYADRHGRKAALLAALALTTIGTLICAVIPTYASIGIAAP 122 Query: 133 IGILVARILLALSAGGEFGSATALLTETGSKRRAFMASWQFSSQGAAALMAALAGFLLNQ 192 IG++ ARIL+A S GGEFGS TAL+ E S+R++F+ SWQFSSQG + ++A+ AG L+ Sbjct: 123 IGLMTARILIAFSTGGEFGSGTALMIEQKSRRKSFLGSWQFSSQGMSTVLASCAGLALST 182 Query: 193 WLTPEQISAWGWRLPFAFGLLIAPVGLYIRRHIDE-VPMAKKAQVAGEDDAS-WGLQVTR 250 L+P QI +WGWR PF FGLL+APVGLYIR+HID+ +P A A R Sbjct: 183 QLSPAQIESWGWRAPFIFGLLVAPVGLYIRKHIDDTLPAAGHAATHNAPVRELLAHSKAR 242 Query: 251 VLVAMGILSVSTAATYLMLLYMPTYAIKQLHLPQSTALYRTRLKKTPPPAAVTGAILMIG 310 +L+A GI++VSTAA+YLM+LYMPTYA+KQLHLP ST T VTG ILM+ Sbjct: 243 ILIAAGIMAVSTAASYLMILYMPTYAVKQLHLPASTGFAAT---------VVTGTILMVF 293 Query: 311 APFMGMLADRVGRARIMVVSTVLTLATIYGSFVWVIAMPTVWVMMAIMIWAGILKAVYFG 370 P MG L+DR GR+R+MV+S + TLATIY FVW++ P+ V+++IM AG+LKA+YFG Sbjct: 294 TPLMGHLSDRYGRSRMMVISAIATLATIYPCFVWLVKSPSFAVLISIMALAGMLKAIYFG 353 Query: 371 SLGVVLSSIFPPATRVRGMGISYSLGATLFGGFTPFMVTWLVGKTGNPVSPSYYLMVCAA 430 L VLSS+FP R G+G SY+LG +FGGFTP++VT ++G T +P+SP++YLM CA Sbjct: 354 PLAAVLSSLFPTHVRSTGLGFSYNLGVMVFGGFTPWLVTAMIGATHDPLSPAFYLMACAV 413 Query: 431 ISLLCVSIYHFRLKKYL 447 +SL CV +YHFRL K++ Sbjct: 414 LSLACVGLYHFRLVKHI 430 >ref|YP_004228551.1| major facilitator superfamily protein [Burkholderia sp. CCGE1001] gb|ADX55491.1| major facilitator superfamily MFS_1 [Burkholderia sp. CCGE1001] Length = 427 Score = 447 bits (1149), Expect = e-123, Method: Composition-based stats. Identities = 249/435 (57%), Positives = 322/435 (74%), Gaps = 10/435 (2%) Query: 13 SSAAEAAPAPMSAARTRRLIVASSIGNALEWFDFVAYGFFAVTISKLFFPTGDETVSLLV 72 S A E A +RLIVASSIGNALEWFDF AYGFFAVT+SKLFFP DETVSLL+ Sbjct: 3 SIATEGQAARHGNRPLKRLIVASSIGNALEWFDFAAYGFFAVTLSKLFFPAHDETVSLLL 62 Query: 73 TFATFGLSYLFRPLGAILLGWYGDKVGRKPALLVSLSMTVAGTLICTVIPTYETIGVAAP 132 TF TFG+SY+FRPLGA++LG Y D+ GRK LL SL +T GTLIC +IPTY +IG+AAP Sbjct: 63 TFGTFGISYIFRPLGALVLGRYADRHGRKAGLLASLWLTTIGTLICALIPTYASIGLAAP 122 Query: 133 IGILVARILLALSAGGEFGSATALLTETGSKRRAFMASWQFSSQGAAALMAALAGFLLNQ 192 IG+++AR+L++ S GGEFGS TAL+ E S R++F+ SWQFSSQG A ++A+ AG L+ Sbjct: 123 IGLMLARVLISFSTGGEFGSGTALMIEQKSARKSFLGSWQFSSQGMATVLASFAGLALSS 182 Query: 193 WLTPEQISAWGWRLPFAFGLLIAPVGLYIRRHIDEVPMAKKAQVAGEDDASWGLQVTRVL 252 L+ +QI AWGWR+PF FGLL+APVGLYIRRH+D+ + + Q A D + RVL Sbjct: 183 QLSTDQIEAWGWRVPFIFGLLVAPVGLYIRRHVDDTHQSMEKQGAPVRDLLVSYK-GRVL 241 Query: 253 VAMGILSVSTAATYLMLLYMPTYAIKQLHLPQSTALYRTRLKKTPPPAAVTGAILMIGAP 312 +A GI++VSTAA+YLM+LYMPTYA+KQLHLP ST T L TG ILM+ P Sbjct: 242 LAAGIMAVSTAASYLMILYMPTYAVKQLHLPASTGFAATVL---------TGTILMVLTP 292 Query: 313 FMGMLADRVGRARIMVVSTVLTLATIYGSFVWVIAMPTVWVMMAIMIWAGILKAVYFGSL 372 MG LAD+ GR+R+M V+ VLTL TIY F W++A P++ V+M+IM+ AG+LKA+YFG L Sbjct: 293 LMGHLADKYGRSRMMTVAAVLTLLTIYPCFRWLLAAPSMSVLMSIMVLAGVLKAIYFGPL 352 Query: 373 GVVLSSIFPPATRVRGMGISYSLGATLFGGFTPFMVTWLVGKTGNPVSPSYYLMVCAAIS 432 VLSS+FP + R G+G SY++G +FGGFTP++VT ++G T +PVSPS+YLM C +S Sbjct: 353 AAVLSSLFPTSMRSTGLGFSYNIGVMVFGGFTPWLVTAMIGWTHDPVSPSFYLMACGILS 412 Query: 433 LLCVSIYHFRLKKYL 447 L C+ +YH + K++ Sbjct: 413 LACIGVYHRFIVKHI 427 >ref|YP_003610292.1| major facilitator superfamily MFS_1 [Burkholderia sp. CCGE1002] gb|ADG20781.1| major facilitator superfamily MFS_1 [Burkholderia sp. CCGE1002] Length = 428 Score = 443 bits (1140), Expect = e-122, Method: Composition-based stats. Identities = 245/435 (56%), Positives = 319/435 (73%), Gaps = 9/435 (2%) Query: 13 SSAAEAAPAPMSAARTRRLIVASSIGNALEWFDFVAYGFFAVTISKLFFPTGDETVSLLV 72 S A+E + +RLIVASSIGNALEWFDF AYGFFAVT+SKLFFP DETVSLL+ Sbjct: 3 SIASEGQALRLGNRPLKRLIVASSIGNALEWFDFAAYGFFAVTLSKLFFPAHDETVSLLL 62 Query: 73 TFATFGLSYLFRPLGAILLGWYGDKVGRKPALLVSLSMTVAGTLICTVIPTYETIGVAAP 132 TF TFG+SY+FRPLGA++LG Y D+ GRK LL SL +T GTLIC +IPTY +IG+AAP Sbjct: 63 TFGTFGISYIFRPLGALVLGRYADRHGRKAGLLASLWLTTIGTLICALIPTYASIGLAAP 122 Query: 133 IGILVARILLALSAGGEFGSATALLTETGSKRRAFMASWQFSSQGAAALMAALAGFLLNQ 192 IG+++AR+L++ S GGEFGS T+L+ E S R++F+ SWQFSSQG A ++A+ AG L+ Sbjct: 123 IGLMLARVLISFSTGGEFGSGTSLMIEQKSARKSFLGSWQFSSQGMATVLASFAGLALSS 182 Query: 193 WLTPEQISAWGWRLPFAFGLLIAPVGLYIRRHIDEVPMAKKAQVAGEDDASWGLQVTRVL 252 L+ +QI AWGWR+PF FGLL+APVGLYIRRH+D+ + + RVL Sbjct: 183 QLSTDQIEAWGWRVPFIFGLLVAPVGLYIRRHVDDTHQSSMEKQGAPVRDLLVSHKGRVL 242 Query: 253 VAMGILSVSTAATYLMLLYMPTYAIKQLHLPQSTALYRTRLKKTPPPAAVTGAILMIGAP 312 +A GI++VSTAA+YLM+LYMPTYA+KQLHLP ST T L TG ILM+ P Sbjct: 243 LAAGIMAVSTAASYLMILYMPTYAVKQLHLPASTGFAATVL---------TGTILMVLTP 293 Query: 313 FMGMLADRVGRARIMVVSTVLTLATIYGSFVWVIAMPTVWVMMAIMIWAGILKAVYFGSL 372 MG LAD+ GR+R+M V+ VLTL TIY F W++A P++ V+M+IM+ AG+LKA+YFG L Sbjct: 294 LMGHLADKYGRSRMMTVAAVLTLLTIYPCFRWLLAAPSMSVLMSIMVLAGVLKAIYFGPL 353 Query: 373 GVVLSSIFPPATRVRGMGISYSLGATLFGGFTPFMVTWLVGKTGNPVSPSYYLMVCAAIS 432 VLSS+FP + R G+G SY++G +FGGFTP++VT ++G T +PVSPS+YLM C +S Sbjct: 354 AAVLSSLFPASMRSTGLGFSYNIGVMVFGGFTPWLVTAMIGWTHDPVSPSFYLMGCGILS 413 Query: 433 LLCVSIYHFRLKKYL 447 L C+ IYH + K++ Sbjct: 414 LACIGIYHRFIVKHI 428 >ref|YP_001895395.1| major facilitator superfamily protein [Burkholderia phytofirmans PsJN] gb|ACD16171.1| major facilitator superfamily MFS_1 [Burkholderia phytofirmans PsJN] Length = 427 Score = 375 bits (964), Expect = e-102, Method: Composition-based stats. Identities = 219/435 (50%), Positives = 295/435 (67%), Gaps = 15/435 (3%) Query: 13 SSAAEAAPAPMSAARTRRLIVASSIGNALEWFDFVAYGFFAVTISKLFFPTGDETVSLLV 72 +S +A+ A SAA+ R+I+A+SIGNALEWFD V YGFFAVTI+KLFFP E +SL++ Sbjct: 3 TSTLQASAARPSAAKVHRIILAASIGNALEWFDLVVYGFFAVTIAKLFFPARTEAISLML 62 Query: 73 TFATFGLSYLFRPLGAILLGWYGDKVGRKPALLVSLSMTVAGTLICTVIPTYETIGVAAP 132 T TFG+SY+ RPLG ++LG D+ GRK +LL+S+++ + GTL V+P Y IG+ AP Sbjct: 63 TLGTFGISYMIRPLGGLVLGSLADRAGRKASLLLSIALMMVGTLTIAVMPPYAAIGLWAP 122 Query: 133 IGILVARILLALSAGGEFGSATALLTETGSKRRAFMASWQFSSQGAAALMAALAGFLLNQ 192 GI+++R++ SAGGEFG++TA L E +RR FM SWQF+SQG A L+A+ G LL Sbjct: 123 AGIMLSRLVQGFSAGGEFGASTAFLVEHAPERRGFMGSWQFASQGMATLLASGFGALLTS 182 Query: 193 WLTPEQISAWGWRLPFAFGLLIAPVGLYIRRHID---EVPMAKKAQVAGEDDASWGLQVT 249 LT Q+ +WGWR+PF FGL I PVG YIRR++D E KA+ D +G Q Sbjct: 183 QLTSAQLESWGWRVPFLFGLAIGPVGFYIRRYVDEGAEFNAEPKARTPLRD--LFGTQKV 240 Query: 250 RVLVAMGILSVSTAATYLMLLYMPTYAIKQLHLPQSTALYRTRLKKTPPPAAVTGAILMI 309 R+L+A+G L +STAA Y M+LYMPTYAIKQLHLP ST T TG +L + Sbjct: 241 RMLLAVGSLIISTAANY-MILYMPTYAIKQLHLPASTGFAAT---------LATGVVLTV 290 Query: 310 GAPFMGMLADRVGRARIMVVSTVLTLATIYGSFVWVIAMPTVWVMMAIMIWAGILKAVYF 369 PF G L+DR+GR RIM + VL L T+Y +FV++ A P+ M+ +IW G+LKA YF Sbjct: 291 LTPFAGHLSDRLGRIRIMATAAVLMLVTVYPAFVYMNAHPSFVTMLLALIWIGVLKATYF 350 Query: 370 GSLGVVLSSIFPPATRVRGMGISYSLGATLFGGFTPFMVTWLVGKTGNPVSPSYYLMVCA 429 G+L ++S IFP TR G+ +SY++G T+FGGF PF++TWL+ +GN ++P +YLM CA Sbjct: 351 GALPALMSEIFPTQTRATGLAVSYNIGVTVFGGFAPFVITWLIDASGNKLAPGFYLMFCA 410 Query: 430 AISLLCVSIYHFRLK 444 SLL + RLK Sbjct: 411 VASLLALYAVRGRLK 425