BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.5548.p (400 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777773.1| hypothetical protein Hsero_4398 [Herbaspiril... 646 0.0 ref|YP_004751041.1| hypothetical protein CFU_0380 [Collimonas fu... 482 e-134 ref|YP_001355125.1| hypothetical protein mma_3435 [Janthinobacte... 462 e-128 ref|YP_001101418.1| hypothetical protein HEAR3190 [Herminiimonas... 450 e-124 ref|ZP_04577549.1| conserved hypothetical protein [Oxalobacter f... 392 e-107 >ref|YP_003777773.1| hypothetical protein Hsero_4398 [Herbaspirillum seropedicae SmR1] gb|ADJ65865.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1] Length = 394 Score = 646 bits (1666), Expect = 0.0, Method: Composition-based stats. Identities = 332/390 (85%), Positives = 358/390 (91%) Query: 11 TIRPMQLQLPEPGADAQSASHSLQHLIAGEIAASGGWISFERYMELALYAPQVGYYSGGS 70 TIRPMQLQLPEPG DAQ+ASH+LQH IAGEIAA+GGWISF+RYMELALYAPQVGYYSGGS Sbjct: 5 TIRPMQLQLPEPGEDAQAASHTLQHQIAGEIAAAGGWISFQRYMELALYAPQVGYYSGGS 64 Query: 71 AKLGKEGDFTTAPEISPLYGATLAHLAAEVIAASPQVANVLLEFGAGTGKLARDILTELQ 130 AKLGKEGDFTTAPEISPLYGATLA LAAEVIAASP V NVLLEFGAGTGKLA DILTELQ Sbjct: 65 AKLGKEGDFTTAPEISPLYGATLASLAAEVIAASPSVDNVLLEFGAGTGKLAHDILTELQ 124 Query: 131 AREALPEKYFIVEISAQLRARQQETLAAFAPLVEWLDALPETFSGVVVGNEVLDAMPVRL 190 AR ALP++YFIVEISAQLRARQQ+TLAAFAPLV+WLDALP TFSGVVVGNEVLDAMPVRL Sbjct: 125 ARAALPQRYFIVEISAQLRARQQQTLAAFAPLVQWLDALPATFSGVVVGNEVLDAMPVRL 184 Query: 191 AIKAEEGWQERGVTVDATGRLQFADRTVSDLPVAQIPEADTLPAGYLTELSPVAIGFMRT 250 A+KAE+GWQERGV +DA GRL+F DR+V DLP+AQIP+A LP GYLTE++PVAIGFM T Sbjct: 185 AVKAEQGWQERGVALDAEGRLRFEDRSVDDLPLAQIPDAHELPPGYLTEVAPVAIGFMHT 244 Query: 251 LGRMLASGPGALAILPDYGFPAAEYYLPDRDQGTLMCHYRHHAHTDPFYWPGLQDITAHV 310 LGRMLASGPGALAILPDYGFPAAEYYL DRDQGTLMCHYRHHAHTDPFYWPGLQDITAHV Sbjct: 245 LGRMLASGPGALAILPDYGFPAAEYYLHDRDQGTLMCHYRHHAHTDPFYWPGLQDITAHV 304 Query: 311 DFTAMARAAIEGGLDVLGYASQAGFLLSAGIGELLLRTSPEQSAQYLPQSNAVQKLISPA 370 DFTAMA AA+E G +VL Y SQ FLL+AGIGELLLRTSPE SA+YLP +N +QKLISPA Sbjct: 305 DFTAMAVAAVEEGAEVLAYTSQGAFLLNAGIGELLLRTSPEDSARYLPLANGMQKLISPA 364 Query: 371 EMGELFKVLVVCKNVDWPGPLLTHDRTHRL 400 EMGELFKVL + KNV+WP +L HDRTHRL Sbjct: 365 EMGELFKVLAIGKNVEWPQRMLRHDRTHRL 394 >ref|YP_004751041.1| hypothetical protein CFU_0380 [Collimonas fungivorans Ter331] gb|AEK60218.1| hypothetical protein CFU_0380 [Collimonas fungivorans Ter331] Length = 409 Score = 482 bits (1240), Expect = e-134, Method: Composition-based stats. Identities = 254/399 (63%), Positives = 304/399 (76%), Gaps = 14/399 (3%) Query: 15 MQLQLPEPGADAQSASHSLQHLIAGEIAASGGWISFERYMELALYAPQVGYYSGGSAKLG 74 MQLQLPE +AQ AS L +LIA EI GWISF RYMEL LYAP +GYYSGG+AKLG Sbjct: 12 MQLQLPEASVEAQRASRLLHNLIATEIRRQHGWISFARYMELLLYAPDLGYYSGGAAKLG 71 Query: 75 KEGDFTTAPEISPLYGATLAHLAAEVIAASPQVANVLLEFGAGTGKLARDILTELQAREA 134 K+GDFTTAPEI+PL+GATLAHL E++ +SP + +LEFGAG+G+LA DILTEL A Sbjct: 72 KDGDFTTAPEITPLFGATLAHLTTELLVSSPALQPRILEFGAGSGQLAHDILTELATSVA 131 Query: 135 -------LPEKYFIVEISAQLRARQQETLAAFAPLVEWLDALPETFSGVVVGNEVLDAMP 187 LP+ Y+IVE+SA+LRARQQ L AF P V+WLD LPE FSGVV+GNEVLDAMP Sbjct: 132 AGDNGAGLPQAYYIVELSAELRARQQLKLQAF-PQVQWLDRLPEAFSGVVIGNEVLDAMP 190 Query: 188 VRLAIKAEEGWQERGVTVDATG------RLQFADRTVSDLPVAQIPEADTLPAGYLTELS 241 V L ++ E+GW +RGV + TG + + DR +AQIP+A++L G+LTE+ Sbjct: 191 VELVLRGEQGWLQRGVGLAETGVEGEDGQFVYIDRPAEPTLIAQIPDAESLTVGHLTEVH 250 Query: 242 PVAIGFMRTLGRMLASGPGALAILPDYGFPAAEYYLPDRDQGTLMCHYRHHAHTDPFYWP 301 PVAIGFM +LG ML +G GA+A+ DYGFPAAEYYL RDQGTLMCHYRHHAH DPFY P Sbjct: 251 PVAIGFMHSLGGMLKAGQGAVALFFDYGFPAAEYYLQQRDQGTLMCHYRHHAHPDPFYLP 310 Query: 302 GLQDITAHVDFTAMARAAIEGGLDVLGYASQAGFLLSAGIGELLLRTSPEQSAQYLPQSN 361 GLQD+TAHVDFTAMA AA++ GLD+LGY+SQA FLL AGIG+LLLRT PE + YLPQ+N Sbjct: 311 GLQDVTAHVDFTAMAAAALDSGLDLLGYSSQAAFLLEAGIGKLLLRTPPENALAYLPQAN 370 Query: 362 AVQKLISPAEMGELFKVLVVCKNVDWPGPLLTHDRTHRL 400 A+QKL+SPAEMGELFKVL V + + P HDR+HRL Sbjct: 371 ALQKLVSPAEMGELFKVLAVGVHAELPARFANHDRSHRL 409 >ref|YP_001355125.1| hypothetical protein mma_3435 [Janthinobacterium sp. Marseille] gb|ABR89685.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille] Length = 386 Score = 462 bits (1190), Expect = e-128, Method: Composition-based stats. Identities = 253/392 (64%), Positives = 292/392 (74%), Gaps = 12/392 (3%) Query: 15 MQLQLPEPGADAQSASHSLQHLIAGEIAASGGWISFERYMELALYAPQVGYYSGGSAKLG 74 MQLQLPEP +DA SAS++LQ+LIA EI GWISF RYMELALYAP VGYYSGG+AKLG Sbjct: 1 MQLQLPEPSSDALSASNTLQNLIADEINRRAGWISFARYMELALYAPDVGYYSGGAAKLG 60 Query: 75 KEGDFTTAPEISPLYGATLAHLAAEVIAAS-PQVANVLLEFGAGTGKLARDILTELQARE 133 K+GDFTTAPEI+ L+G TLAH A E++A S PQ+ LEFGAGTGKLA DILTE A Sbjct: 61 KDGDFTTAPEITSLFGETLAHAAGELMAQSAPQI----LEFGAGTGKLALDILTECAAAG 116 Query: 134 ALPEKYFIVEISAQLRARQQETLAAFAPLVEWLDALPETFSGVVVGNEVLDAMPVRLAIK 193 E+Y IVE+S +LRARQQ+TLA F P V WLD P FSGVV+GNEVLDAMPV L +K Sbjct: 117 IPLERYSIVELSGELRARQQQTLAGF-PQVSWLDDFPPAFSGVVLGNEVLDAMPVSLVVK 175 Query: 194 AEEGWQERGVTVDATGRLQFADRTVSDLPVAQIPEADTLPAGYLTELSPVAIGFMRTLGR 253 E W ERGV++ A GR F DR + QIP+A LP GYLTE+ P+A GFM TL Sbjct: 176 GEAEWLERGVSI-ADGRFIFVDRPCDQELITQIPDAAELPVGYLTEVHPIAAGFMHTLAT 234 Query: 254 MLA-----SGPGALAILPDYGFPAAEYYLPDRDQGTLMCHYRHHAHTDPFYWPGLQDITA 308 ML SG G AIL DYGFPA+EYYL R +GTLMCHYRHH+H DPFY PGLQDITA Sbjct: 235 MLTAGFEQSGKGGAAILIDYGFPASEYYLDQRAEGTLMCHYRHHSHPDPFYLPGLQDITA 294 Query: 309 HVDFTAMARAAIEGGLDVLGYASQAGFLLSAGIGELLLRTSPEQSAQYLPQSNAVQKLIS 368 HVDFT+MA AA+ GL+++GY SQAGFLL+AG+G+ LL T+PE YLP++NAVQKL S Sbjct: 295 HVDFTSMAYAAVRNGLEMVGYMSQAGFLLTAGLGDRLLATAPEDHMAYLPKANAVQKLTS 354 Query: 369 PAEMGELFKVLVVCKNVDWPGPLLTHDRTHRL 400 PAEMGELFKVLVV K V P D++ RL Sbjct: 355 PAEMGELFKVLVVGKAVQLPDQFDRADQSRRL 386 >ref|YP_001101418.1| hypothetical protein HEAR3190 [Herminiimonas arsenicoxydans] emb|CAL63297.1| Conserved hypothetical protein [Herminiimonas arsenicoxydans] Length = 386 Score = 450 bits (1157), Expect = e-124, Method: Composition-based stats. Identities = 249/391 (63%), Positives = 285/391 (72%), Gaps = 10/391 (2%) Query: 15 MQLQLPEPGADAQSASHSLQHLIAGEIAASGGWISFERYMELALYAPQVGYYSGGSAKLG 74 MQLQLP+P DA +ASH LQ+LIA EI GWISF RYMELALYAP +GYYSGG+AKLG Sbjct: 1 MQLQLPQPIPDALAASHKLQNLIAEEIRRHDGWISFARYMELALYAPDLGYYSGGAAKLG 60 Query: 75 KEGDFTTAPEISPLYGATLAHLAAEVIAASPQVANVLLEFGAGTGKLARDILTELQAREA 134 K+GDFTTAPEI+ L+G TLAH A +++A Q A +LEFGAGTGKLA DILTE A Sbjct: 61 KDGDFTTAPEITSLFGETLAHAAGDLMA---QSAPEILEFGAGTGKLALDILTECAAAGI 117 Query: 135 LPEKYFIVEISAQLRARQQETLAAFAPLVEWLDALPETFSGVVVGNEVLDAMPVRLAIKA 194 E Y IVE+S +LRARQQ+ LA F P V WLD P FSGVV+GNEVLDAMPV L +K Sbjct: 118 HLEHYAIVELSGELRARQQQLLAGF-PQVSWLDDFPPAFSGVVLGNEVLDAMPVSLVVKG 176 Query: 195 EEGWQERGVTVDATGRLQFADRTVSDLPVAQIPEADTLPAGYLTELSPVAIGFMRTLGRM 254 E W ERGV G+ +ADR VAQIP+ + LP GYLTE+ PVA GFM TL M Sbjct: 177 EHAWLERGVAY-TDGKFVYADRPCDAALVAQIPDEENLPVGYLTEVHPVAAGFMGTLAEM 235 Query: 255 LA-----SGPGALAILPDYGFPAAEYYLPDRDQGTLMCHYRHHAHTDPFYWPGLQDITAH 309 A SG G AIL DYGFPA EYYL R +GTLMCHYRHHAH DPFY PGLQDITAH Sbjct: 236 FAAGLEQSGKGGAAILFDYGFPAGEYYLDQRSEGTLMCHYRHHAHPDPFYLPGLQDITAH 295 Query: 310 VDFTAMARAAIEGGLDVLGYASQAGFLLSAGIGELLLRTSPEQSAQYLPQSNAVQKLISP 369 VDFTAMA AA+ GL+++GY SQA FLL+AG+G+ LL+TSP + YLP++NAVQKL SP Sbjct: 296 VDFTAMAYAAVRSGLEMVGYMSQAAFLLAAGLGDRLLQTSPADARVYLPKANAVQKLTSP 355 Query: 370 AEMGELFKVLVVCKNVDWPGPLLTHDRTHRL 400 AEMGELFKVLVV V P D++HRL Sbjct: 356 AEMGELFKVLVVGLGVQLPDQFDRMDQSHRL 386 >ref|ZP_04577549.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS] gb|EEO28511.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS] Length = 384 Score = 392 bits (1007), Expect = e-107, Method: Composition-based stats. Identities = 212/390 (54%), Positives = 267/390 (68%), Gaps = 12/390 (3%) Query: 17 LQLPEPGADAQSASHSLQHLIAGEIAASGGWISFERYMELALYAPQVGYYSGGSAKLGKE 76 + PEP +A+S+S +L++ I I + GWISF YM+ LY P+ GYYSGG+A G + Sbjct: 1 MNCPEPSREARSSSVALKNRIVARIESRSGWISFADYMQQVLYEPEYGYYSGGAANFGGQ 60 Query: 77 GDFTTAPEISPLYGATLAHLAAEVIAAS-PQVANVLLEFGAGTGKLARDILTELQAREAL 135 GDF TAPE SPLYG +AH +I + PQ+ LE GAGTG+LA DIL EL ++ Sbjct: 61 GDFVTAPETSPLYGRAMAHALIPLIEQTRPQI----LEIGAGTGRLAHDILAELASKGIS 116 Query: 136 PEKYFIVEISAQLRARQQETLAAFAPLVEWLDALPETFSGVVVGNEVLDAMPVRLAIKAE 195 + Y I+E+S++LR RQQ +L+A P V WL ALPE F GVV+ NEVLDAMPV+L +K + Sbjct: 117 VDCYDILELSSELRERQQTSLSA-CPHVNWLSALPERFDGVVIANEVLDAMPVQLVVKRK 175 Query: 196 EGWQERGVTVDATGRLQFADRT----VSDLPVAQIPEADTLPAGYLTELSPVAIGFMRTL 251 GWQE GV G ++R ++D QIP++D+LP GY+TE+ A GF+RTL Sbjct: 176 TGWQELGV-CHLNGDFVLSERPCDTFLADAITRQIPDSDSLPEGYVTEIHTHACGFVRTL 234 Query: 252 GRMLASGPGALAILPDYGFPAAEYYLPDRDQGTLMCHYRHHAHTDPFYWPGLQDITAHVD 311 MLASG GA A+ DYGFPA EYY DR GTLMCHYRH HTDPF+ PGLQD+TAHVD Sbjct: 235 AEMLASGSGAAAVFVDYGFPAHEYYHRDRSSGTLMCHYRHRLHTDPFFLPGLQDMTAHVD 294 Query: 312 FTAMARAAIEGGLDVLGYASQAGFLLSAGIGELLLRTSPEQSA-QYLPQSNAVQKLISPA 370 FTA+AR A GGLD+L YASQA FL+ AG+ EL+ S E A QY QS AVQKL+SPA Sbjct: 295 FTALARIAEAGGLDLLCYASQANFLIGAGLMELMQGVSAEMDARQYSLQSQAVQKLLSPA 354 Query: 371 EMGELFKVLVVCKNVDWPGPLLTHDRTHRL 400 EMGELFKV+++ NV P +L D++ RL Sbjct: 355 EMGELFKVMILGHNVIPPAFMLDVDKSGRL 384