BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.5547.p         (64 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_004751042.1| hypothetical protein CFU_0381 [Collimonas fu...    70   2e-10
ref|YP_294449.1| hypothetical protein Reut_A0223 [Ralstonia eutr...    68   4e-10
ref|YP_001355124.1| hypothetical protein mma_3434 [Janthinobacte...    66   2e-09
ref|YP_582335.1| hypothetical protein Rmet_0180 [Cupriavidus met...    66   2e-09
ref|YP_004684103.1| hypothetical protein CNE_1c02530 [Cupriavidu...    64   7e-09

>ref|YP_004751042.1| hypothetical protein CFU_0381 [Collimonas fungivorans Ter331]
 gb|AEK60219.1| hypothetical protein CFU_0381 [Collimonas fungivorans Ter331]
          Length = 64

 Score = 69.7 bits (169), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 48/64 (75%), Positives = 58/64 (90%)

Query: 1  MIRWVVVIFIAVVVXSSSLSWLEKLGIGRLPGDLRFRLFGRIFSLPFASTILISVVVFLL 60
          MIRW++VIF+AV+V SS+L WLEKLG+GRLPGDLRF LFGR FSLPFASTIL+S V+FLL
Sbjct: 1  MIRWMLVIFVAVIVFSSALPWLEKLGLGRLPGDLRFTLFGRKFSLPFASTILLSTVLFLL 60

Query: 61 AKIL 64
           ++L
Sbjct: 61 VRLL 64


>ref|YP_294449.1| hypothetical protein Reut_A0223 [Ralstonia eutropha JMP134]
 gb|AAZ59605.1| putative membrane protein [Ralstonia eutropha JMP134]
          Length = 64

 Score = 68.2 bits (165), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 40/64 (62%), Positives = 56/64 (87%)

Query: 1  MIRWVVVIFIAVVVXSSSLSWLEKLGIGRLPGDLRFRLFGRIFSLPFASTILISVVVFLL 60
          M+RW + IF++VVV S++L WL+KLGIGRLPGD+RFRLFGR ++LPFASTIL+S++  ++
Sbjct: 1  MLRWTLTIFLSVVVLSAALPWLQKLGIGRLPGDVRFRLFGRDYTLPFASTILLSLIALVI 60

Query: 61 AKIL 64
           K+L
Sbjct: 61 GKLL 64


>ref|YP_001355124.1| hypothetical protein mma_3434 [Janthinobacterium sp. Marseille]
 gb|ABR91808.1| Uncharacterized conserved protein [Janthinobacterium sp.
          Marseille]
          Length = 64

 Score = 66.2 bits (160), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 40/64 (62%), Positives = 53/64 (82%)

Query: 1  MIRWVVVIFIAVVVXSSSLSWLEKLGIGRLPGDLRFRLFGRIFSLPFASTILISVVVFLL 60
          M+RW + IFIAV+V S++L WLEK GIGRLPGD+RF+LFG+   LPFAST+L+S  +FLL
Sbjct: 1  MLRWFITIFIAVIVFSAALPWLEKFGIGRLPGDIRFKLFGKTIFLPFASTVLLSTAIFLL 60

Query: 61 AKIL 64
          A++ 
Sbjct: 61 ARLF 64


>ref|YP_582335.1| hypothetical protein Rmet_0180 [Cupriavidus metallidurans CH34]
 gb|ABF07066.1| conserved hypothetical protein; putative exported protein
          [Cupriavidus metallidurans CH34]
          Length = 64

 Score = 65.9 bits (159), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 38/64 (59%), Positives = 52/64 (81%)

Query: 1  MIRWVVVIFIAVVVXSSSLSWLEKLGIGRLPGDLRFRLFGRIFSLPFASTILISVVVFLL 60
          M+RW   IF+ V+V S+SL WL+K+G+GRLPGD+RFRLFGR + LPFASTIL+S+   ++
Sbjct: 1  MLRWTFTIFLCVIVLSASLPWLQKIGLGRLPGDVRFRLFGREYVLPFASTILLSLAALVI 60

Query: 61 AKIL 64
           K+L
Sbjct: 61 GKLL 64


>ref|YP_004684103.1| hypothetical protein CNE_1c02530 [Cupriavidus necator N-1]
 gb|AEI75622.1| hypothetical protein CNE_1c02530 [Cupriavidus necator N-1]
          Length = 64

 Score = 64.3 bits (155), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 38/64 (59%), Positives = 55/64 (85%)

Query: 1  MIRWVVVIFIAVVVXSSSLSWLEKLGIGRLPGDLRFRLFGRIFSLPFASTILISVVVFLL 60
          M+RW + IF++V++ S++L WL+K+G+GRLPGD+RFRLFGR F LPFASTIL+S+V  ++
Sbjct: 1  MLRWTLTIFLSVIILSAALPWLQKVGLGRLPGDVRFRLFGREFVLPFASTILLSMVALVI 60

Query: 61 AKIL 64
           K+L
Sbjct: 61 GKLL 64