BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.5540.p         (149 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003777766.1| hypothetical protein Hsero_4391 [Herbaspiril...   141   4e-32
ref|YP_001101575.1| hypothetical protein HEAR3351 [Herminiimonas...   134   6e-30
emb|CAL63454.2| Conserved hypothetical protein [Herminiimonas ar...   123   7e-27
ref|YP_001355264.1| hypothetical protein mma_3574 [Janthinobacte...   121   3e-26
ref|ZP_08275162.1| hypothetical protein IMCC9480_13 [Oxalobacter...   113   9e-24

>ref|YP_003777766.1| hypothetical protein Hsero_4391 [Herbaspirillum seropedicae SmR1]
 gb|ADJ65858.1| hypothetical protein Hsero_4391 [Herbaspirillum seropedicae SmR1]
          Length = 102

 Score =  141 bits (355), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 101/102 (99%), Positives = 102/102 (100%)

Query: 48  MPQSPALKTVRNDMKTLVKDAQALFAEAAAATGEKADELRARGLTLLEAAAEAAQTAQAA 107
           MPQSPALKTVRNDMKTLVKDAQALFAEAAAATGEKADELRARGLTLLEAAAEAAQ+AQAA
Sbjct: 1   MPQSPALKTVRNDMKTLVKDAQALFAEAAAATGEKADELRARGLTLLEAAAEAAQSAQAA 60

Query: 108 AIEKGKEVAAKTDDYVHENPWRAVAISAGLGLLVGLVIGRSK 149
           AIEKGKEVAAKTDDYVHENPWRAVAISAGLGLLVGLVIGRSK
Sbjct: 61  AIEKGKEVAAKTDDYVHENPWRAVAISAGLGLLVGLVIGRSK 102


>ref|YP_001101575.1| hypothetical protein HEAR3351 [Herminiimonas arsenicoxydans]
          Length = 162

 Score =  134 bits (336), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 69/98 (70%), Positives = 81/98 (82%)

Query: 50  QSPALKTVRNDMKTLVKDAQALFAEAAAATGEKADELRARGLTLLEAAAEAAQTAQAAAI 109
           ++  LKT R+DMKTLVKDAQ LF EA +ATGE+ADELR RGL LL++A   AQ  Q AA+
Sbjct: 64  KASTLKTTRSDMKTLVKDAQELFREATSATGERADELRHRGLQLLDSALTKAQEVQTAAL 123

Query: 110 EKGKEVAAKTDDYVHENPWRAVAISAGLGLLVGLVIGR 147
           E GKE+A KTDDYVHENPWRAVAISAG+G+LVGL+I R
Sbjct: 124 ETGKEIAEKTDDYVHENPWRAVAISAGVGVLVGLLISR 161


>emb|CAL63454.2| Conserved hypothetical protein [Herminiimonas arsenicoxydans]
          Length = 100

 Score =  123 bits (309), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 69/98 (70%), Positives = 81/98 (82%)

Query: 50  QSPALKTVRNDMKTLVKDAQALFAEAAAATGEKADELRARGLTLLEAAAEAAQTAQAAAI 109
           ++  LKT R+DMKTLVKDAQ LF EA +ATGE+ADELR RGL LL++A   AQ  Q AA+
Sbjct: 2   KASTLKTTRSDMKTLVKDAQELFREATSATGERADELRHRGLQLLDSALTKAQEVQTAAL 61

Query: 110 EKGKEVAAKTDDYVHENPWRAVAISAGLGLLVGLVIGR 147
           E GKE+A KTDDYVHENPWRAVAISAG+G+LVGL+I R
Sbjct: 62  ETGKEIAEKTDDYVHENPWRAVAISAGVGVLVGLLISR 99


>ref|YP_001355264.1| hypothetical protein mma_3574 [Janthinobacterium sp. Marseille]
 gb|ABR90439.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille]
          Length = 100

 Score =  121 bits (304), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 69/98 (70%), Positives = 78/98 (79%)

Query: 50  QSPALKTVRNDMKTLVKDAQALFAEAAAATGEKADELRARGLTLLEAAAEAAQTAQAAAI 109
           ++  LKT R+DMKTLVKDAQ LF EA +ATGE+ADELR RGL LL+ A   A   Q AAI
Sbjct: 2   KASTLKTTRSDMKTLVKDAQELFREATSATGERADELRNRGLQLLDNALVKAHEVQTAAI 61

Query: 110 EKGKEVAAKTDDYVHENPWRAVAISAGLGLLVGLVIGR 147
           E GKEVA K DDYVHENPWRAVAISAG+G+LVGL+I R
Sbjct: 62  ETGKEVAEKADDYVHENPWRAVAISAGVGVLVGLLISR 99


>ref|ZP_08275162.1| hypothetical protein IMCC9480_13 [Oxalobacteraceae bacterium
           IMCC9480]
 gb|EGF31374.1| hypothetical protein IMCC9480_13 [Oxalobacteraceae bacterium
           IMCC9480]
          Length = 100

 Score =  113 bits (283), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 65/94 (69%), Positives = 75/94 (79%)

Query: 54  LKTVRNDMKTLVKDAQALFAEAAAATGEKADELRARGLTLLEAAAEAAQTAQAAAIEKGK 113
           LKT R DMKTLV+DAQ LF EA +ATG KADELR RG+ LLEAAA  A   QAAA+E GK
Sbjct: 6   LKTGRTDMKTLVRDAQDLFREATSATGVKADELRGRGMELLEAAATRAHDVQAAAVETGK 65

Query: 114 EVAAKTDDYVHENPWRAVAISAGLGLLVGLVIGR 147
           E+A   D+YVH+NPWRAVA+SA +GLLVGL+I R
Sbjct: 66  EIATTADEYVHDNPWRAVAVSATVGLLVGLLIAR 99