BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.5536.p (204 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777762.1| cytochrome c family protein [Herbaspirillum ... 303 1e-80 ref|ZP_08275165.1| putative cytochrome c5 [Oxalobacteraceae bact... 224 6e-57 ref|YP_001355261.1| cytochrome c family protein [Janthinobacteri... 203 1e-50 ref|YP_001101572.1| hypothetical protein HEAR3348 [Herminiimonas... 198 3e-49 ref|YP_001628972.1| hypothetical protein Bpet0369 [Bordetella pe... 172 3e-41 >ref|YP_003777762.1| cytochrome c family protein [Herbaspirillum seropedicae SmR1] gb|ADJ65854.1| cytochrome c family protein [Herbaspirillum seropedicae SmR1] Length = 189 Score = 303 bits (775), Expect = 1e-80, Method: Composition-based stats. Identities = 162/169 (95%), Positives = 165/169 (97%) Query: 27 MSSAQQEHESAIKTPKQLIAAVVAGFLVPIVCIVLLVQYVTNGQKTGAGSDSQTPEMIAA 86 M SAQ EHESAIKTPKQLIAAVVAGF+VPIVCIVLLVQYVTNG KTGAGSDSQTP+MIAA Sbjct: 1 MRSAQHEHESAIKTPKQLIAAVVAGFMVPIVCIVLLVQYVTNGPKTGAGSDSQTPDMIAA 60 Query: 87 RIKPVSDDGFTFRDANGPKQLLSGEEVYKTTCAACHSAGVAGAPKVGDAASWQARIAEGY 146 RIKPVSDDGFTFRDANGPKQLLSGEEVYKTTCAACHSAGVAGAPKVGDAASWQARIA+GY Sbjct: 61 RIKPVSDDGFTFRDANGPKQLLSGEEVYKTTCAACHSAGVAGAPKVGDAASWQARIAQGY 120 Query: 147 DTLVSHAINGLRAMPAKGGNPDLDDVEIQRTVVYMANQSGAKFKEPEAK 195 DTLVSHAINGLRAMPAKGGNPDLDDVEIQRTVVYMANQSGAKFKEPE K Sbjct: 121 DTLVSHAINGLRAMPAKGGNPDLDDVEIQRTVVYMANQSGAKFKEPEVK 169 >ref|ZP_08275165.1| putative cytochrome c5 [Oxalobacteraceae bacterium IMCC9480] gb|EGF31377.1| putative cytochrome c5 [Oxalobacteraceae bacterium IMCC9480] Length = 289 Score = 224 bits (571), Expect = 6e-57, Method: Composition-based stats. Identities = 115/167 (68%), Positives = 138/167 (82%) Query: 27 MSSAQQEHESAIKTPKQLIAAVVAGFLVPIVCIVLLVQYVTNGQKTGAGSDSQTPEMIAA 86 MS +H S IKTPKQLIAAVVAGF+VPI+ IVLLVQYV+N K G GS++ TP+ I+A Sbjct: 1 MSDTHDDHSSGIKTPKQLIAAVVAGFIVPIIGIVLLVQYVSNADKVGDGSNALTPQAISA 60 Query: 87 RIKPVSDDGFTFRDANGPKQLLSGEEVYKTTCAACHSAGVAGAPKVGDAASWQARIAEGY 146 RIKPV+D+GFTF+D N K L SGE VYK C ACH+AGVAG+PK+GD A+W ARIA+GY Sbjct: 61 RIKPVADEGFTFKDVNAIKVLQSGEAVYKAACMACHAAGVAGSPKIGDTAAWSARIAQGY 120 Query: 147 DTLVSHAINGLRAMPAKGGNPDLDDVEIQRTVVYMANQSGAKFKEPE 193 DTLVSHA+NG+R MPAKGGNPDLD++E+ R V YMANQ+GA FKEP+ Sbjct: 121 DTLVSHAVNGIRGMPAKGGNPDLDNIEVARAVAYMANQAGATFKEPD 167 Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 36/77 (46%), Positives = 49/77 (63%), Gaps = 5/77 (6%) Query: 109 SGEEVYKTTCAACHSAGVAGAPKVGDAASWQARIAEGYDTLVSHAINGLRA----MPAKG 164 +G+++Y + C ACH+AG+AGAPK GD +W RI +G L HAI G + MPAKG Sbjct: 209 AGKKLYDSVCMACHTAGIAGAPKFGDKLAWAERIKQGPAVLHEHAIKGYQGKAGVMPAKG 268 Query: 165 GNPDLDDVEIQRTVVYM 181 G+ DD E++ V YM Sbjct: 269 GSAASDD-EVKAAVDYM 284 >ref|YP_001355261.1| cytochrome c family protein [Janthinobacterium sp. Marseille] gb|ABR90517.1| cytochrome c family protein [Janthinobacterium sp. Marseille] Length = 187 Score = 203 bits (517), Expect = 1e-50, Method: Composition-based stats. Identities = 115/163 (70%), Positives = 132/163 (80%) Query: 27 MSSAQQEHESAIKTPKQLIAAVVAGFLVPIVCIVLLVQYVTNGQKTGAGSDSQTPEMIAA 86 MS A E ESAIKTPKQLI A++AGFLVPIVCIVLLV YVTN + GAGSD +PE +AA Sbjct: 1 MSDAHHEEESAIKTPKQLIMAILAGFLVPIVCIVLLVLYVTNEKHIGAGSDGLSPEAVAA 60 Query: 87 RIKPVSDDGFTFRDANGPKQLLSGEEVYKTTCAACHSAGVAGAPKVGDAASWQARIAEGY 146 RIKPV+D GFT +D N PK L +G+EVYK CAACH+ G AGAPK+GDA +W ARIA+GY Sbjct: 61 RIKPVADAGFTLKDVNAPKVLKTGDEVYKMACAACHATGAAGAPKMGDAGAWSARIAQGY 120 Query: 147 DTLVSHAINGLRAMPAKGGNPDLDDVEIQRTVVYMANQSGAKF 189 TL HAI G+RAMPAKGGNPDLDDVE++R VV MAN +GAKF Sbjct: 121 STLAKHAIEGIRAMPAKGGNPDLDDVEVERVVVLMANSAGAKF 163 >ref|YP_001101572.1| hypothetical protein HEAR3348 [Herminiimonas arsenicoxydans] emb|CAL63451.1| putative cytochrome c [Herminiimonas arsenicoxydans] Length = 181 Score = 198 bits (504), Expect = 3e-49, Method: Composition-based stats. Identities = 113/167 (67%), Positives = 134/167 (80%), Gaps = 1/167 (0%) Query: 27 MSSAQQEHESAIKTPKQLIAAVVAGFLVPIVCIVLLVQYVTNGQKTGAGSDSQTPEMIAA 86 MS A E ESAIKTPKQLI A++AGFLVPI+CIVLLV YVTN + GAGS+ PE ++A Sbjct: 1 MSDAHHE-ESAIKTPKQLIMAILAGFLVPIICIVLLVLYVTNDKTIGAGSEGLAPEAVSA 59 Query: 87 RIKPVSDDGFTFRDANGPKQLLSGEEVYKTTCAACHSAGVAGAPKVGDAASWQARIAEGY 146 RIKPV+D+GFT +D N PK L +GEEVYK CAACH+ G AGAPK GDA +W RIA+GY Sbjct: 60 RIKPVADEGFTLKDVNAPKVLKTGEEVYKMACAACHATGAAGAPKFGDAGAWGPRIAQGY 119 Query: 147 DTLVSHAINGLRAMPAKGGNPDLDDVEIQRTVVYMANQSGAKFKEPE 193 +TLV HAI G+RAMPAKGGNPDLDDVE++R VV +AN +G KF EP+ Sbjct: 120 ETLVKHAIQGIRAMPAKGGNPDLDDVEVERVVVLLANSAGGKFAEPK 166 >ref|YP_001628972.1| hypothetical protein Bpet0369 [Bordetella petrii DSM 12804] emb|CAP40701.1| unnamed protein product [Bordetella petrii] Length = 301 Score = 172 bits (436), Expect = 3e-41, Method: Composition-based stats. Identities = 94/165 (56%), Positives = 118/165 (71%), Gaps = 2/165 (1%) Query: 32 QEHESAIKTPKQLIAAVVAGFLVPIVCIVLLVQYVTNGQKTGAGSDSQTPEMIAARIKPV 91 +EH S IKTPKQLI VV FLVPI+ I++LV V++G K GAGSD+ T E +A RI PV Sbjct: 9 EEHASPIKTPKQLIVTVVLAFLVPIIVIIMLVNMVSSGTKVGAGSDTLTEEAVARRIAPV 68 Query: 92 SDDGFTFRDANGPKQLLSGEEVYKTTCAACHSAGVAGAPKVGDAASWQARIAEGYDTLVS 151 + GF DAN PK +GE+V++ C ACH+AGVAGAPKVGD A+W I G++++++ Sbjct: 69 A--GFELVDANAPKVFKTGEQVFQAVCTACHTAGVAGAPKVGDKAAWAPFIKSGFESMLN 126 Query: 152 HAINGLRAMPAKGGNPDLDDVEIQRTVVYMANQSGAKFKEPEAKA 196 A++G AMPAKGGNP L D E+ R VVYMANQSG F EP A A Sbjct: 127 VALHGKGAMPAKGGNPALSDYEVARAVVYMANQSGGSFDEPAAPA 171 Score = 72.8 bits (177), Expect = 3e-11, Method: Composition-based stats. Identities = 37/77 (48%), Positives = 50/77 (64%) Query: 109 SGEEVYKTTCAACHSAGVAGAPKVGDAASWQARIAEGYDTLVSHAINGLRAMPAKGGNPD 168 +GE++YK+TC ACH GVAGAPK GD A+W+ I G D +V A+ G AMP KGG + Sbjct: 224 AGEKLYKSTCFACHGTGVAGAPKFGDKAAWEPYIKTGIDAMVKVALTGKGAMPPKGGAAN 283 Query: 169 LDDVEIQRTVVYMANQS 185 + +I+ V YM N + Sbjct: 284 ASEEDIRAAVEYMVNAA 300