BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.5527.p (264 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_392691.1| nucleotidyl transferase [Sulfurimonas denitrifi... 286 3e-75 ref|YP_001241496.1| putative sugar-phosphate nucleotidyl transfe... 268 5e-70 ref|YP_001207075.1| putative sugar-phosphate nucleotidyl transfe... 268 9e-70 ref|YP_004107786.1| nucleotidyl transferase [Rhodopseudomonas pa... 251 6e-65 ref|YP_001993413.1| nucleotidyl transferase [Rhodopseudomonas pa... 249 3e-64 >ref|YP_392691.1| nucleotidyl transferase [Sulfurimonas denitrificans DSM 1251] gb|ABB43456.1| Nucleotidyl transferase [Sulfurimonas denitrificans DSM 1251] Length = 234 Score = 286 bits (731), Expect = 3e-75, Method: Composition-based stats. Identities = 128/227 (56%), Positives = 172/227 (75%) Query: 1 MRALLLAAGLGTRLRPLTDLLPKCLVPINGRPLLDYWIENLLGQGVDDILINTYYQAHLV 60 MRALLLAAG+G+RLRP+T+ +PKCLVPING+PLL+YW++NL G+D+ LINT++ V Sbjct: 1 MRALLLAAGIGSRLRPITNTIPKCLVPINGKPLLEYWLKNLSEAGIDEFLINTHHLHVQV 60 Query: 61 ERYIAASCWRDRVTLVSEPVLLGTAGTALANRAFFGNKPFLLAHADNLTRFDCRDFLAAH 120 E +I +S +RD++TLV E LL T T L NRAFF N+PF+L HADNL+ D F+ AH Sbjct: 61 EEFIESSKYRDKITLVYEKKLLNTGSTLLTNRAFFDNEPFMLVHADNLSFCDFGKFINAH 120 Query: 121 RDRPAHTALTMMLFETPDPRSCGIVELDANGVVQAFHEKVPEPPGRLANAAVYLLEPEVL 180 ++RP + +TMMLF++ +P SCGIVELD G+VQ F+EKV PP LAN AVY+ E + Sbjct: 121 KNRPNNCDITMMLFKSDNPSSCGIVELDNRGIVQEFYEKVKNPPSNLANGAVYICEASLF 180 Query: 181 DFLDSLGRPEIDFSTEVIPHYLGRIATFTNHAYHRDIGTVQSWTQAQ 227 DFL+ L + EIDFS +V+P YLG+I T+ N+ YHRDIGT++S+ +Q Sbjct: 181 DFLECLDKKEIDFSNDVLPKYLGKINTYFNNTYHRDIGTIESYALSQ 227 >ref|YP_001241496.1| putative sugar-phosphate nucleotidyl transferase [Bradyrhizobium sp. BTAi1] gb|ABQ37590.1| Putative sugar-phosphate nucleotidyl transferase [Bradyrhizobium sp. BTAi1] Length = 240 Score = 268 bits (686), Expect = 5e-70, Method: Composition-based stats. Identities = 133/240 (55%), Positives = 171/240 (71%) Query: 1 MRALLLAAGLGTRLRPLTDLLPKCLVPINGRPLLDYWIENLLGQGVDDILINTYYQAHLV 60 MRALLLAAG+G+RLRPLT+ PKCLV ++ RPLLDYW++ + GV+ L+NT++ A V Sbjct: 1 MRALLLAAGIGSRLRPLTNTTPKCLVRVHDRPLLDYWLDLVFEGGVERALLNTHWLAEQV 60 Query: 61 ERYIAASCWRDRVTLVSEPVLLGTAGTALANRAFFGNKPFLLAHADNLTRFDCRDFLAAH 120 + ++A S WRDR+ LV E LLGT GT LANRA+F ++PFL+AHADNLT FD LAAH Sbjct: 61 QAHVAQSRWRDRIDLVHEDELLGTGGTVLANRAWFADQPFLVAHADNLTDFDVEGLLAAH 120 Query: 121 RDRPAHTALTMMLFETPDPRSCGIVELDANGVVQAFHEKVPEPPGRLANAAVYLLEPEVL 180 R+RP+ +TM+ F T DP SCGI+ELD V AFHEKV PPG LAN AVY+ EP V+ Sbjct: 121 RNRPSGCIMTMLAFRTDDPSSCGILELDQQNRVLAFHEKVKNPPGNLANGAVYVFEPAVI 180 Query: 181 DFLDSLGRPEIDFSTEVIPHYLGRIATFTNHAYHRDIGTVQSWTQAQQDFHMPPAQPGNA 240 D + +LG+ +D STEVIP+YLGRI YHRDIG +S +A +F+ P + +A Sbjct: 181 DDIAALGKSVVDLSTEVIPNYLGRILCVETSGYHRDIGNPESLRRAHLEFNHRPRRGEDA 240 >ref|YP_001207075.1| putative sugar-phosphate nucleotidyl transferase [Bradyrhizobium sp. ORS 278] emb|CAL78858.1| Putative sugar-phosphate nucleotidyl transferase [Bradyrhizobium sp. ORS 278] Length = 240 Score = 268 bits (684), Expect = 9e-70, Method: Composition-based stats. Identities = 131/240 (54%), Positives = 171/240 (71%) Query: 1 MRALLLAAGLGTRLRPLTDLLPKCLVPINGRPLLDYWIENLLGQGVDDILINTYYQAHLV 60 MRALLLAAG+G+RLRPLT+ PKCLV ++ RPLLDYW++ + GV+ L+NT++ A V Sbjct: 1 MRALLLAAGIGSRLRPLTNTTPKCLVRVHDRPLLDYWLDLVFEGGVERALLNTHWLAEQV 60 Query: 61 ERYIAASCWRDRVTLVSEPVLLGTAGTALANRAFFGNKPFLLAHADNLTRFDCRDFLAAH 120 ++A S WRDR+ LV E LLGT GT LANRA+FG++PF++AHADNLT FD + LAAH Sbjct: 61 RAHVAQSRWRDRIDLVHEDELLGTGGTVLANRAWFGDQPFVVAHADNLTDFDVKGLLAAH 120 Query: 121 RDRPAHTALTMMLFETPDPRSCGIVELDANGVVQAFHEKVPEPPGRLANAAVYLLEPEVL 180 + RP +TM+ F T DP SCGI+ELDA V AF+EKV PPG LAN AVY+ +P V+ Sbjct: 121 QGRPDGCIMTMLAFRTDDPSSCGILELDAQRRVIAFYEKVKNPPGNLANGAVYVFDPSVI 180 Query: 181 DFLDSLGRPEIDFSTEVIPHYLGRIATFTNHAYHRDIGTVQSWTQAQQDFHMPPAQPGNA 240 + +LG+P +D STE+IP+YLGRI YHRDIG +S +A +F P + G+A Sbjct: 181 ADIAALGKPVVDLSTEIIPNYLGRILCVETRGYHRDIGNPESLRRAHLEFKHEPRRGGDA 240 >ref|YP_004107786.1| nucleotidyl transferase [Rhodopseudomonas palustris DX-1] gb|ADU43053.1| Nucleotidyl transferase [Rhodopseudomonas palustris DX-1] Length = 309 Score = 251 bits (642), Expect = 6e-65, Method: Composition-based stats. Identities = 135/247 (54%), Positives = 164/247 (66%) Query: 2 RALLLAAGLGTRLRPLTDLLPKCLVPINGRPLLDYWIENLLGQGVDDILINTYYQAHLVE 61 +ALL+AAGLGTRL PLTD+LPKCL+PI GRPLL W++ L G +I++N ++ A LV Sbjct: 6 KALLVAAGLGTRLAPLTDVLPKCLMPIAGRPLLRLWLQMLSEAGFSEIVVNLHHHAELVS 65 Query: 62 RYIAASCWRDRVTLVSEPVLLGTAGTALANRAFFGNKPFLLAHADNLTRFDCRDFLAAHR 121 YI S W RV L E LLGTAGT L +R F P L AHADNL+ F R FLAAH Sbjct: 66 EYIRRSPWSGRVILAPEATLLGTAGTLLRHRERFTEGPTLFAHADNLSLFGPRAFLAAHA 125 Query: 122 DRPAHTALTMMLFETPDPRSCGIVELDANGVVQAFHEKVPEPPGRLANAAVYLLEPEVLD 181 RPA TA+TMM F T P+SCGI+ LD+ G V EK P G LANAAVY++EPEV+D Sbjct: 126 QRPADTAMTMMSFVTDQPQSCGILTLDSAGRVLEMDEKPRHPKGNLANAAVYIVEPEVID 185 Query: 182 FLDSLGRPEIDFSTEVIPHYLGRIATFTNHAYHRDIGTVQSWTQAQQDFHMPPAQPGNAH 241 F+ SLG+P +DFSTEV+P ++GRI F N +YHRDIG S AQ DF + Q N+ Sbjct: 186 FIASLGKPVVDFSTEVLPVFMGRIFAFHNGSYHRDIGNPSSLALAQLDFPLAAIQFENSA 245 Query: 242 AWAELTQ 248 E Q Sbjct: 246 RHCEEAQ 252 >ref|YP_001993413.1| nucleotidyl transferase [Rhodopseudomonas palustris TIE-1] gb|ACF02938.1| Nucleotidyl transferase [Rhodopseudomonas palustris TIE-1] Length = 306 Score = 249 bits (637), Expect = 3e-64, Method: Composition-based stats. Identities = 130/229 (56%), Positives = 161/229 (70%) Query: 2 RALLLAAGLGTRLRPLTDLLPKCLVPINGRPLLDYWIENLLGQGVDDILINTYYQAHLVE 61 +ALL+AAGLGTRL PLTD+LPKCL+PI GRPLL W++ L G +I++N ++ A LV Sbjct: 6 KALLVAAGLGTRLAPLTDVLPKCLMPIAGRPLLGLWLQMLSEAGFSEIVVNLHHHADLVS 65 Query: 62 RYIAASCWRDRVTLVSEPVLLGTAGTALANRAFFGNKPFLLAHADNLTRFDCRDFLAAHR 121 Y+ S W +RV L E LLGTAGT L +RA F + P L AHADNL+ FD R FLAAH Sbjct: 66 EYVRRSPWAERVILAPETTLLGTAGTLLRHRAHFADGPTLFAHADNLSLFDPRAFLAAHA 125 Query: 122 DRPAHTALTMMLFETPDPRSCGIVELDANGVVQAFHEKVPEPPGRLANAAVYLLEPEVLD 181 RP TA+TMM F T P+SCGI+ LD G V EK P G LANAAVY++EPEV+D Sbjct: 126 GRPPDTAMTMMSFVTDHPQSCGILTLDPAGRVLEMDEKPQHPKGNLANAAVYIVEPEVID 185 Query: 182 FLDSLGRPEIDFSTEVIPHYLGRIATFTNHAYHRDIGTVQSWTQAQQDF 230 F+ SLG+P +DFSTEV+P ++GRI +F N +YHRDIG S AQ D+ Sbjct: 186 FIASLGKPVVDFSTEVLPVFMGRIFSFHNGSYHRDIGNPSSLALAQLDY 234