BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.5521.p (201 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001207082.1| hypothetical protein BRADO5172 [Bradyrhizobi... 182 3e-44 ref|YP_001241503.1| hypothetical protein BBta_5639 [Bradyrhizobi... 177 6e-43 ref|ZP_07374489.1| conserved hypothetical protein [Ahrensia sp. ... 169 2e-40 ref|ZP_01385428.1| conserved hypothetical protein [Chlorobium fe... 158 5e-37 ref|NP_893354.1| hypothetical protein PMM1237 [Prochlorococcus m... 148 6e-34 >ref|YP_001207082.1| hypothetical protein BRADO5172 [Bradyrhizobium sp. ORS 278] emb|CAL78865.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 278] Length = 204 Score = 182 bits (461), Expect = 3e-44, Method: Composition-based stats. Identities = 97/203 (47%), Positives = 130/203 (64%), Gaps = 3/203 (1%) Query: 1 MRIGLDFDNTIVTYDSLFHKVATEQGLVPASLPVSKLAVRDYLREAGQDAVFTELQGDVY 60 MRIG+DFDNTI YD +FH A E+GL+PA L K +VRD+L +G+ FTELQG VY Sbjct: 1 MRIGIDFDNTIACYDGVFHAAALERGLIPADLGRDKNSVRDHLNGSGRKDDFTELQGYVY 60 Query: 61 GARMGEAEAFAGVFDFIRQASVRGAELLIISHKTRYPFKGPQHDLHAAATGWID--GTLR 118 GARM + G +F+ A G +L I+SHKT++P GP+HD+HAAA G++ G + Sbjct: 61 GARMDLVSPYPGFAEFVTAARGAGHDLFIVSHKTKHPILGPKHDMHAAARGFLTDRGLMG 120 Query: 119 AATGKDAVQAVYFEPTKEAKIARIADCGCDYFIDDLPEILRMPGFPPQTVRLLFDPEGNH 178 +A G+ A V+FE TK+ K+AR GC+ F+DDLPEIL M GFP ++LFDPE Sbjct: 121 SAPGQIAPDRVFFELTKDEKVARAHALGCELFVDDLPEILGMTGFPEGMRKVLFDPENQF 180 Query: 179 AATS-EFTRLSGWPGIRAFFEER 200 AA + + R + W I A +R Sbjct: 181 AAKAVPYERRASWAEIAADLRDR 203 >ref|YP_001241503.1| hypothetical protein BBta_5639 [Bradyrhizobium sp. BTAi1] gb|ABQ37597.1| hypothetical protein BBta_5639 [Bradyrhizobium sp. BTAi1] Length = 205 Score = 177 bits (450), Expect = 6e-43, Method: Composition-based stats. Identities = 95/198 (47%), Positives = 126/198 (63%), Gaps = 3/198 (1%) Query: 1 MRIGLDFDNTIVTYDSLFHKVATEQGLVPASLPVSKLAVRDYLREAGQDAVFTELQGDVY 60 MRIG+DFDNTI YD +FH A E+GL+PA L K +VRD+L +G+ FTELQG VY Sbjct: 1 MRIGIDFDNTIACYDGVFHAAALERGLIPADLGRDKNSVRDHLNGSGRKDDFTELQGYVY 60 Query: 61 GARMGEAEAFAGVFDFIRQASVRGAELLIISHKTRYPFKGPQHDLHAAATGWID--GTLR 118 GARM + G +F+ A G +L I+SHKT++P GP+HD+HAAA G++ G + Sbjct: 61 GARMDLVSPYPGFAEFVAAARAAGHDLFIVSHKTKHPILGPKHDMHAAARGFLTDRGLMG 120 Query: 119 AATGKDAVQAVYFEPTKEAKIARIADCGCDYFIDDLPEILRMPGFPPQTVRLLFDPEGNH 178 A+G+ A V+FE TK+ K+AR C+ F+DDLPEIL M GFP ++LFDPE Sbjct: 121 EASGQIAPDRVFFELTKDEKVARAHALACELFVDDLPEILAMSGFPDGMRKVLFDPENQF 180 Query: 179 AATS-EFTRLSGWPGIRA 195 AA + R + W I A Sbjct: 181 AAKPVPYERRASWVEIAA 198 >ref|ZP_07374489.1| conserved hypothetical protein [Ahrensia sp. R2A130] gb|EFL89539.1| conserved hypothetical protein [Ahrensia sp. R2A130] Length = 197 Score = 169 bits (428), Expect = 2e-40, Method: Composition-based stats. Identities = 91/197 (46%), Positives = 118/197 (59%), Gaps = 7/197 (3%) Query: 1 MRIGLDFDNTIVTYDSLFHKVATEQGLVPASLPVSKLAVRDYLREAGQDAVFTELQGDVY 60 MRIG+DFDNTI YD +FH A E GL+P+ + SK AVRD++ G FT+LQG VY Sbjct: 1 MRIGIDFDNTIANYDGVFHAAALEAGLIPSGVATSKDAVRDHMNANGSKDEFTKLQGHVY 60 Query: 61 GARMGEAEAFAGVFDFIRQASVRGAELLIISHKTRYPFKGPQHDLHAAATGWIDGTLRAA 120 GARM A G DF+ + G EL I+SHKTR+P GP HD+H AA G+++ + Sbjct: 61 GARMDLARVHDGFADFVARTLNNGHELFIVSHKTRHPMLGPNHDMHTAARGFLE--TNSL 118 Query: 121 TGKDAV--QAVYFEPTKEAKIARIADCGCDYFIDDLPEILRMPGFPPQTVRLLFDPEGNH 178 GKD + + +YFE TK+AK R G FIDDLP +L MP + R+LFDP G H Sbjct: 119 VGKDMIAPEDIYFEETKDAKSDRAKALGVAMFIDDLPAVLAMPQYKSMD-RVLFDPAGTH 177 Query: 179 AATSEFT--RLSGWPGI 193 ++ R+S W I Sbjct: 178 EGKTDLPGRRVSRWNDI 194 >ref|ZP_01385428.1| conserved hypothetical protein [Chlorobium ferrooxidans DSM 13031] gb|EAT59795.1| conserved hypothetical protein [Chlorobium ferrooxidans DSM 13031] Length = 200 Score = 158 bits (399), Expect = 5e-37, Method: Composition-based stats. Identities = 83/176 (47%), Positives = 113/176 (64%), Gaps = 4/176 (2%) Query: 1 MRIGLDFDNTIVTYDSLFHKVATEQGLVPASLPVSKLAVRDYLREAGQDAVFTELQGDVY 60 MR+GLDFDNT+++YD LF++ A ++ L+P + K AVRDYLR+ G + +T LQG+VY Sbjct: 1 MRLGLDFDNTLISYDELFYQAALDKLLIPEVIARQKNAVRDYLRQKGMEDEWTRLQGEVY 60 Query: 61 GARMGEAEAFAGVFDFIRQASVRGAELLIISHKTRYPFKGPQHDLHAAATGWI--DGTLR 118 G R+ +AE F G+ + + RG + I+SHKTR P+ G DLHAAA GW+ G Sbjct: 61 GRRILDAEPFEGMHAALGMLAQRGVPMCIVSHKTRTPYIGEPWDLHAAAAGWLAEQGFYD 120 Query: 119 AATGKDAVQAVYFEPTKEAKIARIADCGCDYFIDDLPEILRMPGFPPQTVRLLFDP 174 A V+FE TKEAK+ARI GC +++DDLPEIL M P ++LFDP Sbjct: 121 PEGLGWAENQVFFEETKEAKVARILALGCTHYVDDLPEILAM--LPESIEKILFDP 174 >ref|NP_893354.1| hypothetical protein PMM1237 [Prochlorococcus marinus subsp. pastoris str. CCMP1986] emb|CAE19696.1| conserved hypothetical protein [Prochlorococcus marinus subsp. pastoris str. CCMP1986] Length = 202 Score = 148 bits (373), Expect = 6e-34, Method: Composition-based stats. Identities = 74/202 (36%), Positives = 121/202 (59%), Gaps = 8/202 (3%) Query: 2 RIGLDFDNTIVTYDSLFHKVATEQGLVPASLPVSKLAVRDYLREAGQDAVFTELQGDVYG 61 ++GLDFDNT++ YD +F+K+A E+ L+P S+ K +VR + + + F +LQG+VYG Sbjct: 3 KLGLDFDNTLIDYDEVFYKLALEKNLIPQSINKDKKSVRKFFIDNNIEDEFIKLQGEVYG 62 Query: 62 ARMGEAEAFAGVFDFIRQASVRGAELLIISHKTRYPFKGPQHDLHAAATGWIDGTLRAAT 121 ++ EA+ G+F+ ++ EL+I+SHKT+YP+ G ++DLH AA+ W++ + Sbjct: 63 LKVLEAKQSFGMFEALKSLKNDNFELIIVSHKTKYPYSGKKYDLHKAASNWLE--VNKFY 120 Query: 122 GKDAV----QAVYFEPTKEAKIARIADCGCDYFIDDLPEILRMPGFPPQTVRLLFDPEGN 177 +D + + VYFE TKE KI+RI + ++IDDL IL M P R+L++P+ Sbjct: 121 DEDGLAMKRENVYFEVTKEDKISRIEELDISFYIDDLQSILEM--IRPSIKRILYNPKFK 178 Query: 178 HAATSEFTRLSGWPGIRAFFEE 199 +F L W ++ EE Sbjct: 179 EKIDKDFYLLENWKDLKYLIEE 200