BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.5520.p (310 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001207080.1| putative transketolase, C-terminal section (... 382 e-104 ref|YP_001241501.1| transketolase subunit B [Bradyrhizobium sp. ... 381 e-103 ref|ZP_07374487.1| 1-deoxy-D-xylulose-5-phosphate synthase [Ahre... 361 8e-98 ref|ZP_01385429.1| Transketolase, central region:Transketolase-l... 335 6e-90 ref|ZP_07333978.1| Transketolase central region [Desulfovibrio f... 308 1e-81 >ref|YP_001207080.1| putative transketolase, C-terminal section (TK) [Bradyrhizobium sp. ORS 278] emb|CAL78863.1| putative transketolase, C-terminal section (TK) [Bradyrhizobium sp. ORS 278] Length = 307 Score = 382 bits (981), Expect = e-104, Method: Composition-based stats. Identities = 180/302 (59%), Positives = 223/302 (73%), Gaps = 1/302 (0%) Query: 1 MRNAFADEITKLGSSDPRVVLLSGDIGNKLFDKFKAANGTRFLNCGIAEANMMGVAAGMA 60 MRNAFADE+TKLG+ DPRVV+LSGDIGN+LFDKFK + +RF NCG+AEANMMGVAAGMA Sbjct: 1 MRNAFADELTKLGNDDPRVVMLSGDIGNRLFDKFKDKHPSRFFNCGVAEANMMGVAAGMA 60 Query: 61 LSGLRPVIYTITPFTTTRCFEQIRVDACYHNVPVIIVGTGSGLSYAELGPTHHSCEDLAI 120 ++GLRPV YTITPF TTRC EQIR D CYH PV IV G+GL+Y+ LGPTHH+CED++ Sbjct: 61 MNGLRPVAYTITPFVTTRCLEQIRTDVCYHEAPVTIVAVGAGLAYSGLGPTHHACEDISF 120 Query: 121 MRVLPNMTVLAPADEVELRQCLRAALKLDGPVYIRIGKKGEQIVPKQD-EHFEIGRAINV 179 +R +PNM V+ P D E+R LRAA++ D PVYIR+GKKGE +V K F+IG+AI + Sbjct: 121 LRSIPNMVVICPGDAFEVRGALRAAMQQDRPVYIRMGKKGEPVVHKGPIADFKIGKAITI 180 Query: 180 RSGSDVCLIGAGTLLPTVMAAADLLQARGISARVESFHTIKPLDEATLEQAFAGYAVVGV 239 GSDVCL+ G +LP + AA L+ +GISA V SFHT+KPLDE L+QAF+ + +V Sbjct: 181 EEGSDVCLLSTGNMLPEAIEAAHRLKEKGISAEVVSFHTVKPLDEDKLKQAFSRFKLVAT 240 Query: 240 VEEHSRIGGLGGAIAEWLARQEPMKGRLLGFGVDDSFMHEIGSQEYARAKYGLTADNIAA 299 +EEHS IGG G A++EWL E + L FG D+F + G QEYAR GLT IA Sbjct: 241 IEEHSLIGGFGAAVSEWLVDSETQSKKFLRFGTPDAFFKKSGEQEYAREVLGLTGHQIAD 300 Query: 300 KV 301 K+ Sbjct: 301 KI 302 >ref|YP_001241501.1| transketolase subunit B [Bradyrhizobium sp. BTAi1] gb|ABQ37595.1| transketolase subunit B [Bradyrhizobium sp. BTAi1] Length = 307 Score = 381 bits (978), Expect = e-103, Method: Composition-based stats. Identities = 181/302 (59%), Positives = 224/302 (74%), Gaps = 1/302 (0%) Query: 1 MRNAFADEITKLGSSDPRVVLLSGDIGNKLFDKFKAANGTRFLNCGIAEANMMGVAAGMA 60 MRNAFADE+TKLG+ D RVV+LSGDIGN+LFDKFK + +RF NCG+AEANMMGVAAGMA Sbjct: 1 MRNAFADELTKLGNEDSRVVMLSGDIGNRLFDKFKDKHPSRFFNCGVAEANMMGVAAGMA 60 Query: 61 LSGLRPVIYTITPFTTTRCFEQIRVDACYHNVPVIIVGTGSGLSYAELGPTHHSCEDLAI 120 ++GLRPV YTITPF TTRC EQIR D CYH PV IV G+GL+Y+ LGPTHH+CED++ Sbjct: 61 MNGLRPVAYTITPFVTTRCLEQIRTDVCYHEAPVTIVAVGAGLAYSGLGPTHHACEDISF 120 Query: 121 MRVLPNMTVLAPADEVELRQCLRAALKLDGPVYIRIGKKGEQIVPKQD-EHFEIGRAINV 179 +R +PNM V+ P D E+R LRAA++ D PVYIR+GKKGE +V K F+IG+AI + Sbjct: 121 LRSIPNMVVICPGDAFEVRGALRAAMQQDRPVYIRMGKKGEPVVHKGPIADFKIGKAITI 180 Query: 180 RSGSDVCLIGAGTLLPTVMAAADLLQARGISARVESFHTIKPLDEATLEQAFAGYAVVGV 239 GSDVCL+ G +LP V+ AA L+ +GISA V SFHT+KPLDE L+QAF+ + +V Sbjct: 181 EEGSDVCLLSTGNMLPEVIEAAHKLKEKGISAEVVSFHTVKPLDEDKLKQAFSRFKLVAT 240 Query: 240 VEEHSRIGGLGGAIAEWLARQEPMKGRLLGFGVDDSFMHEIGSQEYARAKYGLTADNIAA 299 +EEHS IGG G A++EWLA E + L FG D+F + G QEYAR GLT IA Sbjct: 241 IEEHSLIGGFGSAVSEWLADTETKHQKFLRFGTPDAFFKKSGEQEYAREVLGLTGHQIAD 300 Query: 300 KV 301 K+ Sbjct: 301 KI 302 >ref|ZP_07374487.1| 1-deoxy-D-xylulose-5-phosphate synthase [Ahrensia sp. R2A130] gb|EFL89537.1| 1-deoxy-D-xylulose-5-phosphate synthase [Ahrensia sp. R2A130] Length = 307 Score = 361 bits (927), Expect = 8e-98, Method: Composition-based stats. Identities = 176/302 (58%), Positives = 215/302 (71%), Gaps = 1/302 (0%) Query: 1 MRNAFADEITKLGSSDPRVVLLSGDIGNKLFDKFKAANGTRFLNCGIAEANMMGVAAGMA 60 MRNAFADE+T L + D R+V+LSGDIGN+LFDKFK A+ RF NCG+AEANM G+A G+A Sbjct: 1 MRNAFADELTNLANEDDRIVMLSGDIGNRLFDKFKDAHSDRFYNCGVAEANMTGMATGLA 60 Query: 61 LSGLRPVIYTITPFTTTRCFEQIRVDACYHNVPVIIVGTGSGLSYAELGPTHHSCEDLAI 120 ++GLRPV YTITPF TTRC EQIR D CYH+VPV IV G+GLSYA LGPTHH+CED+A Sbjct: 61 MNGLRPVTYTITPFVTTRCLEQIRTDICYHDVPVTIVAVGAGLSYAGLGPTHHACEDIAF 120 Query: 121 MRVLPNMTVLAPADEVELRQCLRAALKLDGPVYIRIGKKGEQIVPKQ-DEHFEIGRAINV 179 +R LPNM V+ P D E+R LRA++K D PVYIR+GKKGE+++ FEIG+A+ + Sbjct: 121 LRALPNMKVVCPGDANEVRAALRASMKQDKPVYIRMGKKGERVIHDGVPVDFEIGKALTI 180 Query: 180 RSGSDVCLIGAGTLLPTVMAAADLLQARGISARVESFHTIKPLDEATLEQAFAGYAVVGV 239 R G DVCL+ G +LP M AAD L +GISA V SFHT+KPLDEA L AF Y V Sbjct: 181 RQGDDVCLLSTGNMLPEAMDAADALAEKGISAAVVSFHTVKPLDEAFLANAFGKYRKVIT 240 Query: 240 VEEHSRIGGLGGAIAEWLARQEPMKGRLLGFGVDDSFMHEIGSQEYARAKYGLTADNIAA 299 +EEHS IGG G A+AEW R++ G D+F + G QEYAR + GL A I Sbjct: 241 LEEHSLIGGFGSAVAEWAVDNGADTSRMIRVGAPDAFFKKGGHQEYAREQLGLNATAICK 300 Query: 300 KV 301 +V Sbjct: 301 RV 302 >ref|ZP_01385429.1| Transketolase, central region:Transketolase-like [Chlorobium ferrooxidans DSM 13031] gb|EAT59796.1| Transketolase, central region:Transketolase-like [Chlorobium ferrooxidans DSM 13031] Length = 313 Score = 335 bits (859), Expect = 6e-90, Method: Composition-based stats. Identities = 162/301 (53%), Positives = 212/301 (70%) Query: 1 MRNAFADEITKLGSSDPRVVLLSGDIGNKLFDKFKAANGTRFLNCGIAEANMMGVAAGMA 60 MRN FA +T+L P +V+L+GDIGN+LFD +KA + RF NCG+AEANM GVA+G+A Sbjct: 1 MRNVFAKTVTELSDIYPELVMLAGDIGNRLFDSYKARHPDRFYNCGVAEANMTGVASGLA 60 Query: 61 LSGLRPVIYTITPFTTTRCFEQIRVDACYHNVPVIIVGTGSGLSYAELGPTHHSCEDLAI 120 SG+RP+ YTITPF T RC EQIR+D CY ++PVI+VGTGSGLSYA LG THHS ED+AI Sbjct: 61 ASGMRPITYTITPFNTVRCLEQIRLDICYPDLPVIVVGTGSGLSYAGLGATHHSMEDIAI 120 Query: 121 MRVLPNMTVLAPADEVELRQCLRAALKLDGPVYIRIGKKGEQIVPKQDEHFEIGRAINVR 180 +R LPNM ++ PAD VE+R L AL+L P YIR+GKKGE ++ D F IGR I +R Sbjct: 121 LRTLPNMHIVCPADPVEVRLALHDALRLGRPTYIRLGKKGEPVIHSSDPDFRIGRGITIR 180 Query: 181 SGSDVCLIGAGTLLPTVMAAADLLQARGISARVESFHTIKPLDEATLEQAFAGYAVVGVV 240 +GSDV ++G G +L T + +A+ L G+SA V S HTIKPLDE L F+ + +V V+ Sbjct: 181 NGSDVAILGVGNMLATALQSAEQLNHHGVSAMVASLHTIKPLDEELLAGIFSLHKLVIVL 240 Query: 241 EEHSRIGGLGGAIAEWLARQEPMKGRLLGFGVDDSFMHEIGSQEYARAKYGLTADNIAAK 300 EEHS IGG G A+ EW + +L+ FG D F++ G Q ARA GLT++NI+ + Sbjct: 241 EEHSLIGGAGSAVLEWGSLNRVDLRKLICFGGPDRFLYACGEQREARASVGLTSENISQQ 300 Query: 301 V 301 + Sbjct: 301 I 301 >ref|ZP_07333978.1| Transketolase central region [Desulfovibrio fructosovorans JJ] gb|EFL50877.1| Transketolase central region [Desulfovibrio fructosovorans JJ] Length = 309 Score = 308 bits (788), Expect = 1e-81, Method: Composition-based stats. Identities = 166/298 (55%), Positives = 199/298 (66%) Query: 1 MRNAFADEITKLGSSDPRVVLLSGDIGNKLFDKFKAANGTRFLNCGIAEANMMGVAAGMA 60 MRNAFADE+ L D RV LLSGDIGN++FD FKA RF NCGIAEANM GVAAGMA Sbjct: 1 MRNAFADEMLALARQDSRVTLLSGDIGNRMFDTFKANFPDRFYNCGIAEANMTGVAAGMA 60 Query: 61 LSGLRPVIYTITPFTTTRCFEQIRVDACYHNVPVIIVGTGSGLSYAELGPTHHSCEDLAI 120 L GLRPV YTI F T RC EQIRVD CY ++PV+IVGTG GLSYA LGPTHH+ ED+A Sbjct: 61 LCGLRPVTYTIAAFNTARCLEQIRVDICYQHLPVVIVGTGGGLSYANLGPTHHALEDVAW 120 Query: 121 MRVLPNMTVLAPADEVELRQCLRAALKLDGPVYIRIGKKGEQIVPKQDEHFEIGRAINVR 180 MR LP MTV+ D VE R LRAAL DGPVY+R+GKKGE V + F +GR + +R Sbjct: 121 MRSLPGMTVVCAGDPVETRLALRAALAHDGPVYLRVGKKGEPCVHQTLPDFALGRCLPLR 180 Query: 181 SGSDVCLIGAGTLLPTVMAAADLLQARGISARVESFHTIKPLDEATLEQAFAGYAVVGVV 240 G DV L+ G+LLP V+ AA+LL+ +GI A V S T+KPLD A L + +V VV Sbjct: 181 QGDDVYLLAVGSLLPEVLRAAELLEQKGIHAGVASMPTVKPLDTAFLARLAETVPLVAVV 240 Query: 241 EEHSRIGGLGGAIAEWLARQEPMKGRLLGFGVDDSFMHEIGSQEYARAKYGLTADNIA 298 EEH GG A+A + A + RL FG D+F+ G Q++ R + GL A +A Sbjct: 241 EEHGPFGGAFEAVAAFFASRGGRMPRLARFGTPDTFLCAAGGQQWYRQRLGLDAAGMA 298