BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.5519.p (275 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001009844.1| N-terminal subunit of transketolase [Prochlo... 357 1e-96 ref|YP_001241500.1| transketolase subunit A [Bradyrhizobium sp. ... 343 2e-92 ref|NP_893352.1| hypothetical protein PMM1235 [Prochlorococcus m... 336 3e-90 ref|YP_001207079.1| putative transketolase N-terminal section (T... 332 4e-89 ref|ZP_07374486.1| putative transketolase N- section [Ahrensia s... 313 1e-83 >ref|YP_001009844.1| N-terminal subunit of transketolase [Prochlorococcus marinus str. AS9601] gb|ABM70737.1| possible N-terminal subunit of transketolase [Prochlorococcus marinus str. AS9601] Length = 288 Score = 357 bits (915), Expect = 1e-96, Method: Composition-based stats. Identities = 157/264 (59%), Positives = 203/264 (76%) Query: 8 LKKTASQLRGRIIENAHRTQTPHLGSCLSCVDILTAAYFGTLRIDPSRPADPLRDRFILS 67 L+K A++LR +II +HR + PHLGSCLSC+D+LT Y+ L I+PS P RDRF+LS Sbjct: 21 LQKIATKLRKKIITTSHRAKIPHLGSCLSCIDLLTYLYWSELFINPSDPKHINRDRFVLS 80 Query: 68 KGHGAAALFQVLALRGFYPIAMLDDYGKDGGIFAEHPPTPDHLPGIEAATGSLGHGLPIG 127 KGHGA A+FQVLA + F+P+ L+++GK G +F EHPP P +PGIEAATGSLGHGLP+ Sbjct: 81 KGHGAPAIFQVLAEKNFFPVTDLNNFGKAGSLFHEHPPKPGLVPGIEAATGSLGHGLPMA 140 Query: 128 LGMALAGRIQQQRYDVTVLLGDGECNEGSVWEAAMMAAAQRTGNLMVLVDFNKWQATGRS 187 LGMALA RI + + +L DGECNEGS+WEAAMMAA+Q+ NL+V++DFNKWQATGRS Sbjct: 141 LGMALASRILKLNFRCYAMLSDGECNEGSIWEAAMMAASQKVENLIVIIDFNKWQATGRS 200 Query: 188 EEVLALNPLVDKWRAFGWDAMEIDGHDMATLVEIMGRPRAPEGKPIAVVAHTVKGKGVSF 247 +++LAL+PL +KW +FGW EIDGHD + + + R + KP A++A+T+KGKGVSF Sbjct: 201 KDILALDPLREKWSSFGWHTQEIDGHDFSQINDAFIEARKIKSKPKAIIANTIKGKGVSF 260 Query: 248 MEDDNNWHYRIPNADEVAAAYQEL 271 MEDDNNWHYR+PN E+ A QEL Sbjct: 261 MEDDNNWHYRVPNNTELENALQEL 284 >ref|YP_001241500.1| transketolase subunit A [Bradyrhizobium sp. BTAi1] gb|ABQ37594.1| transketolase subunit A [Bradyrhizobium sp. BTAi1] Length = 282 Score = 343 bits (879), Expect = 2e-92, Method: Composition-based stats. Identities = 174/270 (64%), Positives = 206/270 (76%), Gaps = 1/270 (0%) Query: 4 DITALKKTASQLRGRIIENAHRTQTPHLGSCLSCVDILTAAYFGTLRIDPSRPADPLRDR 63 D+ ALK A++LRG+IIE +H+ Q HL S LSC D +TAAY+ L IDP P DPLRDR Sbjct: 13 DVAALKAQAARLRGKIIEMSHKAQAAHLASSLSCADAMTAAYWHVLNIDPKNPTDPLRDR 72 Query: 64 FILSKGHGAAALFQVLALRGFYPIAMLDDYGKDGGIFAEHPPTPDHLPGIEAATGSLGHG 123 FILSKGH AAALF LA++G++PI LD Y +DGG AEHPP + LPG+EAATGSLGHG Sbjct: 73 FILSKGHAAAALFATLAMKGYFPIEELDTYCQDGGRLAEHPPA-NLLPGVEAATGSLGHG 131 Query: 124 LPIGLGMALAGRIQQQRYDVTVLLGDGECNEGSVWEAAMMAAAQRTGNLMVLVDFNKWQA 183 LP+G GMALAGRI+ + + V LL DGE NEGSVWEAAM AAAQ+ N+ V+VD+NKWQA Sbjct: 132 LPLGCGMALAGRIKGESFRVFALLSDGENNEGSVWEAAMFAAAQKLENVCVVVDYNKWQA 191 Query: 184 TGRSEEVLALNPLVDKWRAFGWDAMEIDGHDMATLVEIMGRPRAPEGKPIAVVAHTVKGK 243 T RS E L L PL DKW AFGWDA EIDGHD+ L E M GKP+A++AHTVKGK Sbjct: 192 TARSNETLMLAPLRDKWAAFGWDAHEIDGHDVGALAEAMQNIPNGSGKPVALIAHTVKGK 251 Query: 244 GVSFMEDDNNWHYRIPNADEVAAAYQELGV 273 GVSFMEDDNNWHYR P A+EV +++ELG+ Sbjct: 252 GVSFMEDDNNWHYRAPTAEEVVKSFKELGL 281 >ref|NP_893352.1| hypothetical protein PMM1235 [Prochlorococcus marinus subsp. pastoris str. CCMP1986] emb|CAE19694.1| possible N-terminal fragment of transketolase [Prochlorococcus marinus subsp. pastoris str. CCMP1986] Length = 276 Score = 336 bits (861), Expect = 3e-90, Method: Composition-based stats. Identities = 145/253 (57%), Positives = 189/253 (74%) Query: 8 LKKTASQLRGRIIENAHRTQTPHLGSCLSCVDILTAAYFGTLRIDPSRPADPLRDRFILS 67 L +++LR RII+ ++ + PH+GSCLSC+++L Y+ L IDPS RDRFILS Sbjct: 11 LISISTELRKRIIKTSYEAKIPHIGSCLSCIELLVFLYWKELNIDPSNSEAINRDRFILS 70 Query: 68 KGHGAAALFQVLALRGFYPIAMLDDYGKDGGIFAEHPPTPDHLPGIEAATGSLGHGLPIG 127 KGHGA ALFQVL L+GF+PI L+ +GK G +F EHPP P ++PGIEAATGSLGHG P+ Sbjct: 71 KGHGAPALFQVLGLKGFFPIERLNSFGKPGSVFHEHPPKPGYIPGIEAATGSLGHGFPMA 130 Query: 128 LGMALAGRIQQQRYDVTVLLGDGECNEGSVWEAAMMAAAQRTGNLMVLVDFNKWQATGRS 187 +GM+LA RI +Y +L DGECNEGS+WEAAM A AQ+ +L + +DFNKWQATGRS Sbjct: 131 VGMSLAKRINNLQYRTYSILSDGECNEGSIWEAAMFAGAQKLDDLTIFIDFNKWQATGRS 190 Query: 188 EEVLALNPLVDKWRAFGWDAMEIDGHDMATLVEIMGRPRAPEGKPIAVVAHTVKGKGVSF 247 +EVLAL+PL +KW++FGWD EIDGH + + + + + KP A++AHT+KGKGVSF Sbjct: 191 KEVLALDPLKEKWQSFGWDVYEIDGHKFNQIDKSIELAKTNKNKPSAIIAHTIKGKGVSF 250 Query: 248 MEDDNNWHYRIPN 260 MED+NNWHY+ PN Sbjct: 251 MEDNNNWHYKTPN 263 >ref|YP_001207079.1| putative transketolase N-terminal section (TK) [Bradyrhizobium sp. ORS 278] emb|CAL78862.1| putative transketolase N-terminal section (TK) [Bradyrhizobium sp. ORS 278] Length = 282 Score = 332 bits (851), Expect = 4e-89, Method: Composition-based stats. Identities = 173/270 (64%), Positives = 206/270 (76%), Gaps = 1/270 (0%) Query: 4 DITALKKTASQLRGRIIENAHRTQTPHLGSCLSCVDILTAAYFGTLRIDPSRPADPLRDR 63 D+ ALK A++LRG+IIE +H+ Q HL S LSC D +TAAY+ L IDP P DPLRDR Sbjct: 13 DVAALKAQAAKLRGKIIEMSHKAQAAHLASSLSCADAMTAAYWHVLNIDPKNPTDPLRDR 72 Query: 64 FILSKGHGAAALFQVLALRGFYPIAMLDDYGKDGGIFAEHPPTPDHLPGIEAATGSLGHG 123 FILSKGH AAALF LA++G++PI LD Y +DGG AEHPP + LPG+EAATGSLGHG Sbjct: 73 FILSKGHAAAALFATLAMKGYFPIEELDTYCQDGGRLAEHPPA-NLLPGVEAATGSLGHG 131 Query: 124 LPIGLGMALAGRIQQQRYDVTVLLGDGECNEGSVWEAAMMAAAQRTGNLMVLVDFNKWQA 183 LP+G GMALAGRI+ + + V LL DGE NEGSVWEAAM AAAQ+ N+ V+VD+NKWQA Sbjct: 132 LPLGCGMALAGRIKGENFRVFALLSDGENNEGSVWEAAMFAAAQKLENVCVVVDYNKWQA 191 Query: 184 TGRSEEVLALNPLVDKWRAFGWDAMEIDGHDMATLVEIMGRPRAPEGKPIAVVAHTVKGK 243 T RS E L L PL DKW AFGWDA EIDGHD+ L E M GKP+A++AHT+KGK Sbjct: 192 TARSNETLMLAPLRDKWAAFGWDAHEIDGHDVGALAEAMQNIPNGSGKPVALIAHTMKGK 251 Query: 244 GVSFMEDDNNWHYRIPNADEVAAAYQELGV 273 GVSFMEDDNNWHYR P A+EV +++ELG+ Sbjct: 252 GVSFMEDDNNWHYRAPTAEEVVKSFKELGL 281 >ref|ZP_07374486.1| putative transketolase N- section [Ahrensia sp. R2A130] gb|EFL89536.1| putative transketolase N- section [Ahrensia sp. R2A130] Length = 277 Score = 313 bits (803), Expect = 1e-83, Method: Composition-based stats. Identities = 153/269 (56%), Positives = 193/269 (71%), Gaps = 2/269 (0%) Query: 6 TALKKTASQLRGRIIENAHRTQTPHLGSCLSCVDILTAAYFGTLRIDPSRPADPLRDRFI 65 T L+K A+++RGRII +++ HL S LS DILTAAYF IDP+ P DP RDR I Sbjct: 4 TDLQKIAAEIRGRIITMCAASKSAHLASSLSVTDILTAAYFSAANIDPNNPKDPARDRII 63 Query: 66 LSKGHGAAALFQVLALRGFYPIAMLDDYGKDGGIFAEHPPTPDHLPGIEAATGSLGHGLP 125 LSKGH A AL+ LA RG++ A+LD Y +DG + AEHPP + L G+EAATGSLGHGLP Sbjct: 64 LSKGHAAMALYATLAKRGYFDAALLDTYNQDGALLAEHPPA-NLLAGVEAATGSLGHGLP 122 Query: 126 IGLGMALAGRIQQQR-YDVTVLLGDGECNEGSVWEAAMMAAAQRTGNLMVLVDFNKWQAT 184 IG G+ALA +I++ + V++ DGECNEGSVWEAAM A NLMV VD+NKWQAT Sbjct: 123 IGAGIALANKIKKSDPHRTIVIMSDGECNEGSVWEAAMFAGGNGLDNLMVFVDYNKWQAT 182 Query: 185 GRSEEVLALNPLVDKWRAFGWDAMEIDGHDMATLVEIMGRPRAPEGKPIAVVAHTVKGKG 244 RS E LAL+PL +KW AFGWDA ++DGH+ L ++M GKP+A++ TVKGKG Sbjct: 183 ARSNETLALSPLREKWEAFGWDAHQVDGHNPDALADLMTNMPNGSGKPVAIICDTVKGKG 242 Query: 245 VSFMEDDNNWHYRIPNADEVAAAYQELGV 273 V FMEDDNNWHYR+P +EV A+++LG+ Sbjct: 243 VDFMEDDNNWHYRVPKHEEVEEAHKQLGL 271