BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.5516.p (316 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_01385433.1| NAD-dependent epimerase/dehydratase:3-beta hy... 518 e-145 ref|YP_001207076.1| putative sugar-nucleotide epimerase/dehydrat... 506 e-141 ref|YP_001241497.1| putative sugar-nucleotide epimerase/dehydrat... 504 e-141 ref|YP_487416.1| NAD-dependent epimerase/dehydratase [Rhodopseud... 478 e-133 ref|YP_004107778.1| NAD-dependent epimerase/dehydratase [Rhodops... 474 e-132 >ref|ZP_01385433.1| NAD-dependent epimerase/dehydratase:3-beta hydroxysteroid dehydrogenase/isomerase:Polysaccharide biosynthesis protein CapD:dTDP-4-dehydrorhamnose reductase [Chlorobium ferrooxidans DSM 13031] gb|EAT59800.1| NAD-dependent epimerase/dehydratase:3-beta hydroxysteroid dehydrogenase/isomerase:Polysaccharide biosynthesis protein CapD:dTDP-4-dehydrorhamnose reductase [Chlorobium ferrooxidans DSM 13031] Length = 313 Score = 518 bits (1335), Expect = e-145, Method: Composition-based stats. Identities = 245/312 (78%), Positives = 274/312 (87%) Query: 1 MNILVTGGCGYKGSVLVPKLLARGYKVHVLDIMWFGNYLAPHPNLTVTEGDVRNIDQINL 60 M ILVTGGCGYKG VL+PKLLAR Y+V D+ WFGN+L PH LTV +GDVR+I+ I L Sbjct: 1 MKILVTGGCGYKGHVLIPKLLARDYEVIAFDLQWFGNFLEPHKKLTVVKGDVRDIESIPL 60 Query: 61 DGVDTIIHLSSVANDPCGDLDPKLTWEVSALATMQLADKAVRKGVKQFIYASSGSVYGVK 120 GVD IIHLSS+ANDPCGDL+PKLTWEVSAL+TMQLADKA R GV+QFIYASSGSVYG+K Sbjct: 61 TGVDCIIHLSSIANDPCGDLNPKLTWEVSALSTMQLADKARRTGVRQFIYASSGSVYGIK 120 Query: 121 EELQVTEDLELKPISEYNKTKMVSEPVLLSYKDRMIVQIVRPATVCGYSPRMRLDVSVNL 180 EELQVTE+LELKPISEYNKTKMV+E VLLSY+D VQIVRPATVCGYSPRMR DVSVNL Sbjct: 121 EELQVTEELELKPISEYNKTKMVAERVLLSYQDDFAVQIVRPATVCGYSPRMRFDVSVNL 180 Query: 181 LTMQALAKGKITVFGGTQVRPNIHIDDITDVYLHLIDHPEITGVYNAGFENISILDIARM 240 LT+QAL G ITVFGG Q+RPNIHIDDITDVYLHLIDHPE+ G+YNAGFENISILDIAR+ Sbjct: 181 LTIQALTNGLITVFGGNQIRPNIHIDDITDVYLHLIDHPELGGIYNAGFENISILDIARL 240 Query: 241 VAKHIPVDIVVTESNDPRSYRVNSDKLLATGFKPSKSVETAITEIIEKYRSGVLKDEDRY 300 V +H+P I VTESNDPRSYRVNSDKLLATGF+P K+VE AI EIIEKYR+G L+DED + Sbjct: 241 VTRHVPAGIAVTESNDPRSYRVNSDKLLATGFRPKKTVEDAIGEIIEKYRAGTLRDEDHF 300 Query: 301 YNLKWMEQTVLS 312 YNLKWM+Q L+ Sbjct: 301 YNLKWMQQNDLA 312 >ref|YP_001207076.1| putative sugar-nucleotide epimerase/dehydratase [Bradyrhizobium sp. ORS 278] emb|CAL78859.1| putative sugar-nucleotide epimerase/dehydratase [Bradyrhizobium sp. ORS 278] Length = 312 Score = 506 bits (1303), Expect = e-141, Method: Composition-based stats. Identities = 241/311 (77%), Positives = 268/311 (86%) Query: 1 MNILVTGGCGYKGSVLVPKLLARGYKVHVLDIMWFGNYLAPHPNLTVTEGDVRNIDQINL 60 M I VTG CGYKGSVLVPKLL G+KV DIMWFGN+L PHP+LTV +GDVRN D I+L Sbjct: 1 MKIFVTGACGYKGSVLVPKLLKAGHKVVAFDIMWFGNFLEPHPDLTVVQGDVRNPDAIDL 60 Query: 61 DGVDTIIHLSSVANDPCGDLDPKLTWEVSALATMQLADKAVRKGVKQFIYASSGSVYGVK 120 GVD IIHLSSVANDPCGDLDPKLTWE+S LATMQLAD+A R G+K+FIYASSGSVYGVK Sbjct: 61 TGVDAIIHLSSVANDPCGDLDPKLTWEISCLATMQLADRAYRHGIKRFIYASSGSVYGVK 120 Query: 121 EELQVTEDLELKPISEYNKTKMVSEPVLLSYKDRMIVQIVRPATVCGYSPRMRLDVSVNL 180 EE QVTEDLEL PISEYNKTKM E ++LSYKD M+VQIVRPATVCGYSPR RLDVSVN+ Sbjct: 121 EEEQVTEDLELLPISEYNKTKMCGERIVLSYKDDMVVQIVRPATVCGYSPRQRLDVSVNM 180 Query: 181 LTMQALAKGKITVFGGTQVRPNIHIDDITDVYLHLIDHPEITGVYNAGFENISILDIARM 240 LTMQAL G+ITVFGG Q RPNIHIDDITD+YL L+DHPE TGVYNAGFENISILDIA M Sbjct: 181 LTMQALMNGRITVFGGDQTRPNIHIDDITDLYLFLLDHPEHTGVYNAGFENISILDIANM 240 Query: 241 VAKHIPVDIVVTESNDPRSYRVNSDKLLATGFKPSKSVETAITEIIEKYRSGVLKDEDRY 300 V KH+P +++VT SNDPRSYRVNSD+LLATGF+P K+VE AI EII Y G LK+EDR+ Sbjct: 241 VTKHVPAEVIVTPSNDPRSYRVNSDRLLATGFRPKKTVEDAIKEIIGMYSQGALKNEDRW 300 Query: 301 YNLKWMEQTVL 311 YNLKWME+ V+ Sbjct: 301 YNLKWMEKEVV 311 >ref|YP_001241497.1| putative sugar-nucleotide epimerase/dehydratase [Bradyrhizobium sp. BTAi1] gb|ABQ37591.1| putative sugar-nucleotide epimerase/dehydratase [Bradyrhizobium sp. BTAi1] Length = 312 Score = 504 bits (1298), Expect = e-141, Method: Composition-based stats. Identities = 240/311 (77%), Positives = 269/311 (86%) Query: 1 MNILVTGGCGYKGSVLVPKLLARGYKVHVLDIMWFGNYLAPHPNLTVTEGDVRNIDQINL 60 M I VTG CGYKGSVLVPKLL G+KV DIMWFGN+L PHP+LTV +GDVRN D I+L Sbjct: 1 MKIFVTGACGYKGSVLVPKLLKAGHKVVAFDIMWFGNFLEPHPDLTVVQGDVRNPDAIDL 60 Query: 61 DGVDTIIHLSSVANDPCGDLDPKLTWEVSALATMQLADKAVRKGVKQFIYASSGSVYGVK 120 GVD IIHLSSVANDPCGDLDPKLTWE+S LATMQLAD+A R G+K+FIYASSGSVYGVK Sbjct: 61 TGVDAIIHLSSVANDPCGDLDPKLTWEISCLATMQLADRAYRHGIKRFIYASSGSVYGVK 120 Query: 121 EELQVTEDLELKPISEYNKTKMVSEPVLLSYKDRMIVQIVRPATVCGYSPRMRLDVSVNL 180 EE QVTEDLEL PISEYNKTKM E ++LSYKD M+VQIVRPATVCGYSPR RLDVSVN+ Sbjct: 121 EEEQVTEDLELLPISEYNKTKMCGERIVLSYKDDMVVQIVRPATVCGYSPRQRLDVSVNM 180 Query: 181 LTMQALAKGKITVFGGTQVRPNIHIDDITDVYLHLIDHPEITGVYNAGFENISILDIARM 240 LTMQAL G+ITVFGG Q RPNIHIDDITD+YL L+DHPE TGVYNAGFENISILDIA++ Sbjct: 181 LTMQALMNGRITVFGGDQTRPNIHIDDITDLYLFLLDHPEHTGVYNAGFENISILDIAKL 240 Query: 241 VAKHIPVDIVVTESNDPRSYRVNSDKLLATGFKPSKSVETAITEIIEKYRSGVLKDEDRY 300 V KH+P ++VVT SNDPRSYRVNSD+LLATGF+P K+VE AI EII Y G LK++DR+ Sbjct: 241 VTKHVPAEVVVTPSNDPRSYRVNSDRLLATGFRPKKTVEDAIKEIIGMYSQGQLKNDDRW 300 Query: 301 YNLKWMEQTVL 311 YNLKWME+ V+ Sbjct: 301 YNLKWMEKEVV 311 >ref|YP_487416.1| NAD-dependent epimerase/dehydratase [Rhodopseudomonas palustris HaA2] gb|ABD08505.1| NAD-dependent epimerase/dehydratase [Rhodopseudomonas palustris HaA2] Length = 312 Score = 478 bits (1231), Expect = e-133, Method: Composition-based stats. Identities = 231/310 (74%), Positives = 265/310 (85%) Query: 1 MNILVTGGCGYKGSVLVPKLLARGYKVHVLDIMWFGNYLAPHPNLTVTEGDVRNIDQINL 60 M ILVTG CGY G+ LVPKLLARG +V DIMWFGN L PHP LTV GDVR+ I L Sbjct: 1 MKILVTGACGYVGTTLVPKLLARGDEVVAFDIMWFGNDLTPHPALTVVRGDVRDAATIPL 60 Query: 61 DGVDTIIHLSSVANDPCGDLDPKLTWEVSALATMQLADKAVRKGVKQFIYASSGSVYGVK 120 DG+D IIHL+SVANDPCGDL+PKLTWE+SALATMQLAD+A R+G+K+FIYASSGSVYG+K Sbjct: 61 DGIDAIIHLASVANDPCGDLNPKLTWEISALATMQLADRAAREGIKRFIYASSGSVYGIK 120 Query: 121 EELQVTEDLELKPISEYNKTKMVSEPVLLSYKDRMIVQIVRPATVCGYSPRMRLDVSVNL 180 +E QVTEDL L+PISEYNKTKMV+E V+LSY D M VQIVRPATVCG SPRMRLDVSVN+ Sbjct: 121 DEEQVTEDLTLEPISEYNKTKMVAERVMLSYADDMAVQIVRPATVCGPSPRMRLDVSVNM 180 Query: 181 LTMQALAKGKITVFGGTQVRPNIHIDDITDVYLHLIDHPEITGVYNAGFENISILDIARM 240 LTMQAL G+ITVFGG QVRPNIHIDDITD+Y+ L++ PE+ GVYNAGFENISILDIARM Sbjct: 181 LTMQALTNGEITVFGGNQVRPNIHIDDITDLYVMLLERPELRGVYNAGFENISILDIARM 240 Query: 241 VAKHIPVDIVVTESNDPRSYRVNSDKLLATGFKPSKSVETAITEIIEKYRSGVLKDEDRY 300 V +P I VTESNDPRSYR+NSDKLLATGFKP+K+V AI EII K++ G LK+EDR+ Sbjct: 241 VDAQVPTKITVTESNDPRSYRINSDKLLATGFKPNKTVNDAIREIIVKFQRGELKNEDRH 300 Query: 301 YNLKWMEQTV 310 YNL+WM++ V Sbjct: 301 YNLRWMQRGV 310 >ref|YP_004107778.1| NAD-dependent epimerase/dehydratase [Rhodopseudomonas palustris DX-1] gb|ADU43045.1| NAD-dependent epimerase/dehydratase [Rhodopseudomonas palustris DX-1] Length = 312 Score = 474 bits (1220), Expect = e-132, Method: Composition-based stats. Identities = 226/310 (72%), Positives = 262/310 (84%) Query: 1 MNILVTGGCGYKGSVLVPKLLARGYKVHVLDIMWFGNYLAPHPNLTVTEGDVRNIDQINL 60 M ILVTG CGY G+ LVPKLLARG +V DIMWFGN L PHP LTV GDVR+ I+L Sbjct: 1 MKILVTGACGYVGTTLVPKLLARGDEVVAFDIMWFGNDLPPHPALTVVRGDVRDTSSIDL 60 Query: 61 DGVDTIIHLSSVANDPCGDLDPKLTWEVSALATMQLADKAVRKGVKQFIYASSGSVYGVK 120 G+D I+HL+SVANDPCGDLDPKLTWE+SALATMQLAD+A R G+++F+YASSGSVYG+K Sbjct: 61 SGIDAIVHLASVANDPCGDLDPKLTWEISALATMQLADRAARAGIQRFVYASSGSVYGIK 120 Query: 121 EELQVTEDLELKPISEYNKTKMVSEPVLLSYKDRMIVQIVRPATVCGYSPRMRLDVSVNL 180 +E QVTEDL L+PISEYNKTKMV+E V+LSY M VQIVRPATVCG SPRMRLDVSVN+ Sbjct: 121 DEEQVTEDLTLEPISEYNKTKMVAERVMLSYAGDMAVQIVRPATVCGPSPRMRLDVSVNM 180 Query: 181 LTMQALAKGKITVFGGTQVRPNIHIDDITDVYLHLIDHPEITGVYNAGFENISILDIARM 240 LTMQAL G+ITVFGG QVRPNIHIDDITD+YL L+D PE+ G+YNAGFENISILDIARM Sbjct: 181 LTMQALTNGEITVFGGNQVRPNIHIDDITDLYLMLLDRPELRGIYNAGFENISILDIARM 240 Query: 241 VAKHIPVDIVVTESNDPRSYRVNSDKLLATGFKPSKSVETAITEIIEKYRSGVLKDEDRY 300 V +P I VT SNDPRSYR+NSDKLLATGFKP K+V AI EII K++ G LK+EDR+ Sbjct: 241 VDAQVPTKITVTASNDPRSYRINSDKLLATGFKPKKTVNDAIREIIVKFQRGELKNEDRH 300 Query: 301 YNLKWMEQTV 310 YNL+WM++++ Sbjct: 301 YNLRWMQRSL 310