BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.5507.p (336 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777784.1| UDP-glucose 4-epimerase [Herbaspirillum sero... 672 0.0 ref|YP_284462.1| UDP-galactose 4-epimerase [Dechloromonas aromat... 523 e-146 ref|YP_003809932.1| UDP-glucose 4-epimerase [gamma proteobacteri... 521 e-146 ref|NP_840758.1| NAD-dependent epimerase/dehydratase family prot... 514 e-144 ref|YP_748076.1| UDP-glucose 4-epimerase [Nitrosomonas eutropha ... 513 e-143 >ref|YP_003777784.1| UDP-glucose 4-epimerase [Herbaspirillum seropedicae SmR1] gb|ACO81756.1| GalE [Herbaspirillum seropedicae SmR1] gb|ADJ65876.1| UDP-glucose 4-epimerase protein [Herbaspirillum seropedicae SmR1] Length = 336 Score = 672 bits (1735), Expect = 0.0, Method: Composition-based stats. Identities = 313/335 (93%), Positives = 330/335 (98%) Query: 1 MNILVTGGAGYIGSHTCVELLKAGHEVIVFDNFCNSSPESVARVQQITGRSLALVKGDIR 60 MNILVTGGAGYIGSHTCVELLKAGHEVIVFDNFCNSSPESV RVQQITG++L+LVKGDIR Sbjct: 1 MNILVTGGAGYIGSHTCVELLKAGHEVIVFDNFCNSSPESVKRVQQITGKTLSLVKGDIR 60 Query: 61 NRDQLESVLREFKCDAVIHFAGLKAVGESVEKPLMYYDNNVVGTVRLLEAMEATGVKTIV 120 NR+QLESVLREFKC+AVIHFAGLKAVGESVE+PLMYYDNNVVGTVRLLEAM+ATGVKTIV Sbjct: 61 NREQLESVLREFKCEAVIHFAGLKAVGESVEQPLMYYDNNVVGTVRLLEAMQATGVKTIV 120 Query: 121 FSSSATVYGDPQYLPLTESHPLSASNPYGRSKIVIEDMLRDYHRAHPDWKIALLRYFNPV 180 FSSSATVYGDPQYLPL E+HPLSASNPYGRSKIVIEDMLRDY+RAHPDWKIALLRYFNPV Sbjct: 121 FSSSATVYGDPQYLPLDEAHPLSASNPYGRSKIVIEDMLRDYYRAHPDWKIALLRYFNPV 180 Query: 181 GAHESGMIGEDPGGIPNNLMPYVAQVAVGRREKLSIWGGDYPTPDGTGVRDFIHVVDLAT 240 GAHESG+IGEDPGGIPNNLMP+VAQVA+GRRE+L+IWGGDYPTPDGTGVRDFIHVVDLA Sbjct: 181 GAHESGLIGEDPGGIPNNLMPFVAQVAIGRRERLNIWGGDYPTPDGTGVRDFIHVVDLAR 240 Query: 241 GHVAALQALDAPQCFAVNLGTGVGYSVLDVLKAYEKACGKTLPYAIAERRPGDIASCYAN 300 GHVAALQALDAPQCFAVNLGTGVGYSVLDVLKAYEKACGKTLPYAIAERRPGDIASCYAN Sbjct: 241 GHVAALQALDAPQCFAVNLGTGVGYSVLDVLKAYEKACGKTLPYAIAERRPGDIASCYAN 300 Query: 301 PAEARRKLGWEAKLGLDAMCADSWRWQQNNPNGFK 335 PAEA+RKLGWEA LGL+AMCADSW+WQQ NPNGFK Sbjct: 301 PAEAKRKLGWEATLGLEAMCADSWKWQQMNPNGFK 335 >ref|YP_284462.1| UDP-galactose 4-epimerase [Dechloromonas aromatica RCB] gb|AAZ45992.1| UDP-galactose 4-epimerase [Dechloromonas aromatica RCB] Length = 334 Score = 523 bits (1348), Expect = e-146, Method: Composition-based stats. Identities = 234/333 (70%), Positives = 281/333 (84%) Query: 3 ILVTGGAGYIGSHTCVELLKAGHEVIVFDNFCNSSPESVARVQQITGRSLALVKGDIRNR 62 ILVTGGAGYIGSHTCVELL +G +V+VFDNFCNS PES+ RV+ ITG+ +A+VKGDIR++ Sbjct: 2 ILVTGGAGYIGSHTCVELLNSGQDVVVFDNFCNSHPESIKRVEAITGKKIAVVKGDIRDQ 61 Query: 63 DQLESVLREFKCDAVIHFAGLKAVGESVEKPLMYYDNNVVGTVRLLEAMEATGVKTIVFS 122 +E+ LR++ C +VIHFAGLKAVGESVEKPL YYDNNV+GT +LL+AM G+KT+VFS Sbjct: 62 AAVEAALRQYDCQSVIHFAGLKAVGESVEKPLAYYDNNVIGTHKLLQAMSNCGIKTLVFS 121 Query: 123 SSATVYGDPQYLPLTESHPLSASNPYGRSKIVIEDMLRDYHRAHPDWKIALLRYFNPVGA 182 SSATVYG+PQ+LPLTE HPLS +NPYGR+K+VIEDMLRD +R+ W+I +LRYFNPVGA Sbjct: 122 SSATVYGEPQFLPLTEQHPLSGTNPYGRTKLVIEDMLRDLYRSDSSWRIGILRYFNPVGA 181 Query: 183 HESGMIGEDPGGIPNNLMPYVAQVAVGRREKLSIWGGDYPTPDGTGVRDFIHVVDLATGH 242 HESG+IGEDP GIPNNLMP+VAQVAVGRRE+LS+WG DYPTPDGTGVRD+IHVVDLA GH Sbjct: 182 HESGLIGEDPQGIPNNLMPFVAQVAVGRRERLSVWGNDYPTPDGTGVRDYIHVVDLAIGH 241 Query: 243 VAALQALDAPQCFAVNLGTGVGYSVLDVLKAYEKACGKTLPYAIAERRPGDIASCYANPA 302 + AL L +CF VNLGTG G SVLDV+KA+E A G+ +PY +A RR GD+ASCYA+PA Sbjct: 242 LKALACLSESRCFEVNLGTGTGCSVLDVIKAFESASGRPIPYELAPRRAGDVASCYADPA 301 Query: 303 EARRKLGWEAKLGLDAMCADSWRWQQNNPNGFK 335 A L W A+ L+ MC D+WRWQ NNPNGF+ Sbjct: 302 FAAELLQWRAERNLEVMCVDAWRWQSNNPNGFR 334 >ref|YP_003809932.1| UDP-glucose 4-epimerase [gamma proteobacterium HdN1] emb|CBL44271.1| UDP-glucose 4-epimerase [gamma proteobacterium HdN1] Length = 335 Score = 521 bits (1342), Expect = e-146, Method: Composition-based stats. Identities = 236/334 (70%), Positives = 282/334 (84%) Query: 1 MNILVTGGAGYIGSHTCVELLKAGHEVIVFDNFCNSSPESVARVQQITGRSLALVKGDIR 60 M++LVTGGAGYIGSHTCVELL AGH+V+V DNF NS PES+ RVQ+I G+S+ LV+GDIR Sbjct: 1 MSVLVTGGAGYIGSHTCVELLGAGHQVVVLDNFSNSHPESIVRVQKIAGKSVTLVEGDIR 60 Query: 61 NRDQLESVLREFKCDAVIHFAGLKAVGESVEKPLMYYDNNVVGTVRLLEAMEATGVKTIV 120 + Q+ +RE C +VIHFAGLKAVGESVE+PL YYDNNV GT+ LL AM + GVKT+V Sbjct: 61 DEAQVAKTIREHNCTSVIHFAGLKAVGESVEQPLRYYDNNVQGTLCLLRAMGSCGVKTLV 120 Query: 121 FSSSATVYGDPQYLPLTESHPLSASNPYGRSKIVIEDMLRDYHRAHPDWKIALLRYFNPV 180 FSSSATVYG+PQ LPL ESHPLSA+NPYGRSK++IE++LRD RA PDW+I +LRYFNPV Sbjct: 121 FSSSATVYGEPQQLPLVESHPLSATNPYGRSKLMIEEILRDLFRAEPDWRIGILRYFNPV 180 Query: 181 GAHESGMIGEDPGGIPNNLMPYVAQVAVGRREKLSIWGGDYPTPDGTGVRDFIHVVDLAT 240 GAH+SG IGEDP GIPNNLMPYVAQVA+GRRE+LS+WG DYPTPDGTGVRD+IHVVDLA Sbjct: 181 GAHKSGTIGEDPQGIPNNLMPYVAQVAIGRRERLSVWGSDYPTPDGTGVRDYIHVVDLAL 240 Query: 241 GHVAALQALDAPQCFAVNLGTGVGYSVLDVLKAYEKACGKTLPYAIAERRPGDIASCYAN 300 GHV AL L AP CF VNLGTGVGYSVLDV++A+E+A G+ + Y + ERRPGD+ASCYA+ Sbjct: 241 GHVKALDKLKAPSCFEVNLGTGVGYSVLDVVRAFERASGRKVAYQLCERRPGDVASCYAD 300 Query: 301 PAEARRKLGWEAKLGLDAMCADSWRWQQNNPNGF 334 P A LGW+A+ ++AMC D+WRWQ+ NP G+ Sbjct: 301 PHFAASFLGWKAERDINAMCEDAWRWQEQNPQGY 334 >ref|NP_840758.1| NAD-dependent epimerase/dehydratase family protein [Nitrosomonas europaea ATCC 19718] emb|CAD84590.1| NAD dependent epimerase/dehydratase family [Nitrosomonas europaea ATCC 19718] Length = 335 Score = 514 bits (1325), Expect = e-144, Method: Composition-based stats. Identities = 231/334 (69%), Positives = 282/334 (84%) Query: 1 MNILVTGGAGYIGSHTCVELLKAGHEVIVFDNFCNSSPESVARVQQITGRSLALVKGDIR 60 MN+LVTGGAGYIGSHTCVELL AG+EV++FDNFCNS PE++ R++QIT + + +V GDIR Sbjct: 1 MNVLVTGGAGYIGSHTCVELLTAGYEVVIFDNFCNSHPEALRRIEQITSKKITIVTGDIR 60 Query: 61 NRDQLESVLREFKCDAVIHFAGLKAVGESVEKPLMYYDNNVVGTVRLLEAMEATGVKTIV 120 N+ +E L+++ C+AVIHFAGLKAVGESVEKPL YYDNNV+GT RLL AM+ GV T+V Sbjct: 61 NQVAIEKALKDYGCEAVIHFAGLKAVGESVEKPLEYYDNNVIGTHRLLAAMQNCGVYTLV 120 Query: 121 FSSSATVYGDPQYLPLTESHPLSASNPYGRSKIVIEDMLRDYHRAHPDWKIALLRYFNPV 180 FSSSATVYG+PQ LPLTE HPLSA+NPYGRSK++IE+MLRD +RA P ++IA+LRYFNPV Sbjct: 121 FSSSATVYGEPQRLPLTEDHPLSATNPYGRSKLIIEEMLRDVYRADPRFRIAILRYFNPV 180 Query: 181 GAHESGMIGEDPGGIPNNLMPYVAQVAVGRREKLSIWGGDYPTPDGTGVRDFIHVVDLAT 240 GAH+SG+IGEDP GIPNNLMP+VAQVAVGRRE L++WG DYPT DGTGVRD+IHVVDLA Sbjct: 181 GAHDSGLIGEDPQGIPNNLMPFVAQVAVGRREYLNVWGSDYPTHDGTGVRDYIHVVDLAL 240 Query: 241 GHVAALQALDAPQCFAVNLGTGVGYSVLDVLKAYEKACGKTLPYAIAERRPGDIASCYAN 300 GH+ AL L PQC A+NLGTG+GYSVLDV+KA+E+A + + Y +A RR GD+A+CYAN Sbjct: 241 GHLGALDYLTVPQCMAINLGTGIGYSVLDVIKAFEEASSRQIDYRLASRRSGDVAACYAN 300 Query: 301 PAEARRKLGWEAKLGLDAMCADSWRWQQNNPNGF 334 PA A + L W+A+ L MC D WRWQ+NNP G+ Sbjct: 301 PALAEKLLRWKAQRDLAVMCRDHWRWQKNNPAGY 334 >ref|YP_748076.1| UDP-glucose 4-epimerase [Nitrosomonas eutropha C91] gb|ABI60111.1| UDP-galactose 4-epimerase [Nitrosomonas eutropha C91] Length = 335 Score = 513 bits (1320), Expect = e-143, Method: Composition-based stats. Identities = 232/334 (69%), Positives = 285/334 (85%) Query: 1 MNILVTGGAGYIGSHTCVELLKAGHEVIVFDNFCNSSPESVARVQQITGRSLALVKGDIR 60 M +LVTGGAGYIGSHTCVELL AG+EV+VFDNFCNS PE++ RV++ITG+ LA+V+GD+R Sbjct: 1 MKVLVTGGAGYIGSHTCVELLTAGYEVVVFDNFCNSHPEALRRVEKITGKKLAVVRGDVR 60 Query: 61 NRDQLESVLREFKCDAVIHFAGLKAVGESVEKPLMYYDNNVVGTVRLLEAMEATGVKTIV 120 ++ +E VL+++ C+AVIHFAGLKAVGESVEKPL YYDNNV+ T+RLL AM+ V T+V Sbjct: 61 DQATIEKVLKDYHCEAVIHFAGLKAVGESVEKPLEYYDNNVISTLRLLAAMQNCAVYTLV 120 Query: 121 FSSSATVYGDPQYLPLTESHPLSASNPYGRSKIVIEDMLRDYHRAHPDWKIALLRYFNPV 180 FSSSATVYG+PQ LPLTE HPLSA+NPYGRSK++IE+MLRD +RA+P ++IA+LRYFNPV Sbjct: 121 FSSSATVYGEPQRLPLTEDHPLSATNPYGRSKLMIEEMLRDVYRANPQFRIAILRYFNPV 180 Query: 181 GAHESGMIGEDPGGIPNNLMPYVAQVAVGRREKLSIWGGDYPTPDGTGVRDFIHVVDLAT 240 GAH+SG+IGEDP GIPNNLMP+VAQVAVGRRE L++WG DYPT DGTGVRD+IHVVDLA Sbjct: 181 GAHDSGLIGEDPQGIPNNLMPFVAQVAVGRREHLNVWGSDYPTHDGTGVRDYIHVVDLAL 240 Query: 241 GHVAALQALDAPQCFAVNLGTGVGYSVLDVLKAYEKACGKTLPYAIAERRPGDIASCYAN 300 GH++AL L PQC AVNLGTG GYSVLDV+KA+E A G+ +PY ++ RR GD+A+CYA+ Sbjct: 241 GHLSALGHLATPQCLAVNLGTGTGYSVLDVVKAFENASGQHVPYQLSPRRAGDVATCYAD 300 Query: 301 PAEARRKLGWEAKLGLDAMCADSWRWQQNNPNGF 334 PA A + L W A+ L AMC D WRWQ+ NP G+ Sbjct: 301 PALAEKILEWNAQRDLAAMCRDHWRWQKCNPEGY 334