BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.5494.p         (197 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003777736.1| CoA-binding protein [Herbaspirillum seropedi...   240   1e-61
ref|YP_004755032.1| putative NAD(P)-binding protein [Collimonas ...   171   5e-41
ref|ZP_04765036.1| CoA-binding domain-containing protein [Acidov...   155   3e-36
ref|ZP_07675180.1| CoA-binding domain protein [Ralstonia sp. 5_7...   132   3e-29
ref|YP_003744117.1| hypothetical protein RCFBP_10154 [Ralstonia ...   132   3e-29

>ref|YP_003777736.1| CoA-binding protein [Herbaspirillum seropedicae SmR1]
 gb|ADJ65828.1| CoA-binding protein [Herbaspirillum seropedicae SmR1]
          Length = 153

 Score =  240 bits (612), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 135/153 (88%), Positives = 144/153 (94%)

Query: 45  MSSVASPASQAPLASHANGKPIIAVVGLSNRPERASFDVAAYMQSAGYRIVAVNPMYAGQ 104
           MSS  +P+S + L SH +GKPIIAVVGLSNRPERASFDVAAYMQ+AGYRIVAVNPMYAGQ
Sbjct: 1   MSSAVAPSSTSSLPSHVHGKPIIAVVGLSNRPERASFDVAAYMQAAGYRIVAVNPMYAGQ 60

Query: 105 TILGEHCHASLQDASAALASDGLRISIVDCFRKSADIPPVVEEAIAIGAECVWMQLDIVH 164
           TILGEHCHASL  ASAALA +GLRI+IVDCFRKSADIPPVVEEAIAIGA+CVWMQLDIVH
Sbjct: 61  TILGEHCHASLVQASAALAGEGLRIAIVDCFRKSADIPPVVEEAIAIGADCVWMQLDIVH 120

Query: 165 EEAAARARAAGLKVVMDKCIKIEHAMGQSHGVL 197
           EEAAARARAAGLKV+MDKCIKIEHAMGQSHGVL
Sbjct: 121 EEAAARARAAGLKVIMDKCIKIEHAMGQSHGVL 153


>ref|YP_004755032.1| putative NAD(P)-binding protein [Collimonas fungivorans Ter331]
 gb|AEK64209.1| putative NAD(P)-binding enzyme [Collimonas fungivorans Ter331]
          Length = 146

 Score =  171 bits (434), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 91/147 (61%), Positives = 113/147 (76%), Gaps = 2/147 (1%)

Query: 51  PASQAPLASHANGKPIIAVVGLSNRPERASFDVAAYMQSAGYRIVAVNPMYAGQTILGEH 110
           P + AP+ + AN  PIIA+VGLS +P+R S+ VA YMQ  GYRI+ VNPM+ G  ILGE 
Sbjct: 2   PNTSAPVPNAAN--PIIAIVGLSTKPDRPSYGVARYMQERGYRIIPVNPMHVGAQILGEP 59

Query: 111 CHASLQDASAALASDGLRISIVDCFRKSADIPPVVEEAIAIGAECVWMQLDIVHEEAAAR 170
           C+A+L DA+ ALA+D  +I IVDCFRK+ DIPP+V EAI I A CVWMQL IV+E AAA+
Sbjct: 60  CYANLFDAAKALAADQQKIDIVDCFRKAEDIPPIVGEAIMIDARCVWMQLGIVNEAAAAK 119

Query: 171 ARAAGLKVVMDKCIKIEHAMGQSHGVL 197
           ARA G++V MD CIKIEHA+G  HG+L
Sbjct: 120 ARANGIQVEMDSCIKIEHALGNLHGIL 146


>ref|ZP_04765036.1| CoA-binding domain-containing protein [Acidovorax delafieldii 2AN]
 gb|EER58158.1| CoA-binding domain-containing protein [Acidovorax delafieldii 2AN]
          Length = 171

 Score =  155 bits (392), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 79/125 (63%), Positives = 96/125 (76%), Gaps = 2/125 (1%)

Query: 67  IAVVGLSNRPERASFDVAAYMQSAGYRIVAVNPMYA--GQTILGEHCHASLQDASAALAS 124
           IAVVGLS +  R SF  A YMQ+ GYRIV VNP+ A  G +ILGE CHASL +A  A+A 
Sbjct: 21  IAVVGLSPQWHRPSFFAAKYMQAHGYRIVPVNPVVAREGGSILGEPCHASLHEAEQAIAR 80

Query: 125 DGLRISIVDCFRKSADIPPVVEEAIAIGAECVWMQLDIVHEEAAARARAAGLKVVMDKCI 184
            G RI +VDCFRKS DIPP+ EEA+AIGA C+W+QL +VHEEAA RA  AGL+V+ ++C+
Sbjct: 81  QGGRIDMVDCFRKSEDIPPLAEEAVAIGARCLWLQLGVVHEEAAQRAEDAGLQVIQNRCV 140

Query: 185 KIEHA 189
           KIEHA
Sbjct: 141 KIEHA 145


>ref|ZP_07675180.1| CoA-binding domain protein [Ralstonia sp. 5_7_47FAA]
 gb|EFP66470.1| CoA-binding domain protein [Ralstonia sp. 5_7_47FAA]
          Length = 153

 Score =  132 bits (331), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 73/135 (54%), Positives = 98/135 (72%), Gaps = 1/135 (0%)

Query: 54  QAPLASHANGKPIIAVVGLSNRPERASFDVAAYMQSAGYRIVAVNPMYAGQTILGEHCHA 113
           QA +    +GK  IAVVGLS RP R S+DVA Y+Q AGYRIV VNP++AG+ +LGE C+A
Sbjct: 11  QATMRGLLSGK-TIAVVGLSPRPTRPSYDVARYLQQAGYRIVPVNPLHAGEDVLGEPCYA 69

Query: 114 SLQDASAALASDGLRISIVDCFRKSADIPPVVEEAIAIGAECVWMQLDIVHEEAAARARA 173
           +L +A+  LA+ G RI +VD FR+S  + PVV+EA+ +G   +W+QL IV++EA A AR 
Sbjct: 70  TLTEAATTLAAAGQRIDLVDIFRRSEQVLPVVQEAVTLGVGGIWVQLGIVNDEAMAVARN 129

Query: 174 AGLKVVMDKCIKIEH 188
           AG+  V D+C KIEH
Sbjct: 130 AGIPAVQDRCTKIEH 144


>ref|YP_003744117.1| hypothetical protein RCFBP_10154 [Ralstonia solanacearum CFBP2957]
 emb|CBJ41469.1| conserved protein of unknown function, CoA-binding domain
           [Ralstonia solanacearum CFBP2957]
          Length = 153

 Score =  132 bits (331), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 74/135 (54%), Positives = 98/135 (72%), Gaps = 1/135 (0%)

Query: 54  QAPLASHANGKPIIAVVGLSNRPERASFDVAAYMQSAGYRIVAVNPMYAGQTILGEHCHA 113
           QA +    +GK  IAVVGLS RP R S+DVA Y+Q AGYRIV VNP +AG+ +LGE C+A
Sbjct: 11  QAIMRRLLSGK-TIAVVGLSPRPTRPSYDVARYLQQAGYRIVPVNPQHAGEDVLGEPCYA 69

Query: 114 SLQDASAALASDGLRISIVDCFRKSADIPPVVEEAIAIGAECVWMQLDIVHEEAAARARA 173
           +L +A+  LA+ G RI +VD FR++  + PVV EA+A+G   +W+QL IV++EA A ARA
Sbjct: 70  TLTEAATRLAAAGRRIDLVDIFRRAEHVLPVVREAVALGVGGIWVQLGIVNDEALAAARA 129

Query: 174 AGLKVVMDKCIKIEH 188
           AG+  V D+C KIEH
Sbjct: 130 AGIPAVQDRCTKIEH 144